RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 DRC7Q8IY82 874 aa8.45□□□□□ -1.06
COL28A1-202ENST00000430711 KBTBD3Q8NAB2 608 aa8.45□□□□□ -1.06
COL28A1-202ENST00000430711 ENGASEQ8NFI3 743 aa8.45□□□□□ -1.06
COL28A1-202ENST00000430711 RAPGEF4Q8WZA2 1011 aa8.45□□□□□ -1.06
COL28A1-202ENST00000430711 INCENPQ9NQS7 918 aa8.45□□□□□ -1.06
COL28A1-202ENST00000430711 KIF3AQ9Y496 699 aa8.45□□□□□ -1.06
COL28A1-202ENST00000430711 CLIC4Q9Y696 253 aa8.45□□□□□ -1.06
COL28A1-202ENST00000430711 PFKFB2O60825 505 aa8.45□□□□□ -1.06
COL28A1-202ENST00000430711 PDIA3P30101 505 aaKnown RBP8.45□□□□□ -1.06
COL28A1-202ENST00000430711 NEXNQ0ZGT2 675 aa8.45□□□□□ -1.06
COL28A1-202ENST00000430711 NBPF11Q86T75 865 aa8.45□□□□□ -1.06
COL28A1-202ENST00000430711 PRIMPOLQ96LW4 560 aa8.45□□□□□ -1.06
COL28A1-202ENST00000430711 NBPF3Q9H094 633 aa8.45□□□□□ -1.06
COL28A1-202ENST00000430711 ALDH8A1Q9H2A2 487 aaPredicted RBP8.45□□□□□ -1.06
COL28A1-202ENST00000430711 PAG1Q9NWQ8 432 aa8.45□□□□□ -1.06
COL28A1-202ENST00000430711 CLIP2Q9UDT6 1046 aa8.45□□□□□ -1.06
COL28A1-202ENST00000430711 MROH7-TTC4A0A0A0MT08 1334 aa8.44□□□□□ -1.06
COL28A1-202ENST00000430711 SRCAPQ6ZRS2 3230 aa8.44□□□□□ -1.06
COL28A1-202ENST00000430711 ECM29Q5VYK3 1845 aa8.44□□□□□ -1.06
COL28A1-202ENST00000430711 H3BQV1 296 aa8.44□□□□□ -1.06
COL28A1-202ENST00000430711 BIN1O00499 593 aa8.44□□□□□ -1.06
COL28A1-202ENST00000430711 POLR3DP05423 398 aaPredicted RBP8.44□□□□□ -1.06
COL28A1-202ENST00000430711 ANTXR2P58335 489 aa8.44□□□□□ -1.06
COL28A1-202ENST00000430711 GOLGA8FQ08AF8 430 aa8.44□□□□□ -1.06
COL28A1-202ENST00000430711 GOLGA8DPQ0D2H9 430 aa8.44□□□□□ -1.06
COL28A1-202ENST00000430711 DPCR1Q3MIW9 517 aa8.44□□□□□ -1.06
COL28A1-202ENST00000430711 RNF20Q5VTR2 975 aa8.44□□□□□ -1.06
COL28A1-202ENST00000430711 ANKRD7Q92527 254 aa8.44□□□□□ -1.06
COL28A1-202ENST00000430711 SCAND2PQ9GZW5 306 aaPredicted RBP8.44□□□□□ -1.06
COL28A1-202ENST00000430711 TRMT1Q9NXH9 659 aaKnown RBP8.44□□□□□ -1.06
COL28A1-202ENST00000430711 KIF1AQ12756 1690 aa8.44□□□□□ -1.06
COL28A1-202ENST00000430711 GOLGA6L4A6NEF3 574 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 HIP1O00291 1037 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 FANCGO15287 622 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 CSB-PGBD3P0DP91 1061 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 CCZ1BP86790 482 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 CCZ1P86791 482 aaPredicted RBP8.43□□□□□ -1.06
COL28A1-202ENST00000430711 FILIP1Q7Z7B0 1213 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 AOPEPQ8N6M6 819 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 DDX19AQ9NUU7 478 aaKnown RBP8.43□□□□□ -1.06
COL28A1-202ENST00000430711 HMG20BQ9P0W2 317 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 HPS5Q9UPZ3 1129 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 CARMIL3Q8ND23 1372 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 DDX60Q8IY21 1712 aaKnown RBP8.43□□□□□ -1.06
COL28A1-202ENST00000430711 A0A1B0GUL7 405 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 SNAP23O00161 211 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 CTIFO43310 598 aaKnown RBP8.43□□□□□ -1.06
COL28A1-202ENST00000430711 SNRPA1P09661 255 aaKnown RBP8.43□□□□□ -1.06
COL28A1-202ENST00000430711 NDUFA8P51970 172 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 ZMYM1Q5SVZ6 1142 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 PROSER2Q86WR7 435 aaPredicted RBP8.43□□□□□ -1.06
COL28A1-202ENST00000430711 FSIP1Q8NA03 581 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 ZNF592Q92610 1267 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 PUS7LQ9H0K6 701 aaKnown RBP8.43□□□□□ -1.06
COL28A1-202ENST00000430711 FBXO3Q9UK99 471 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 PCDHA7Q9UN72 937 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 ZNF330Q9Y3S2 320 aaPredicted RBP8.43□□□□□ -1.06
COL28A1-202ENST00000430711 SH3TC1Q8TE82 1336 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 PKD1L3Q7Z443 1732 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 GOLGB1Q14789 3259 aaKnown RBP8.43□□□□□ -1.06
COL28A1-202ENST00000430711 LAMB4A4D0S4 1761 aa8.43□□□□□ -1.06
COL28A1-202ENST00000430711 H7C1W4 665 aa8.42□□□□□ -1.06
COL28A1-202ENST00000430711 TNNT1P13805 278 aa8.42□□□□□ -1.06
COL28A1-202ENST00000430711 PDCP20941 246 aa8.42□□□□□ -1.06
COL28A1-202ENST00000430711 FGD1P98174 961 aa8.42□□□□□ -1.06
COL28A1-202ENST00000430711 FKBP4Q02790 459 aaKnown RBP eCLIP8.42□□□□□ -1.06
COL28A1-202ENST00000430711 ANKRD1Q15327 319 aa8.42□□□□□ -1.06
COL28A1-202ENST00000430711 DHX32Q7L7V1 743 aaKnown RBP8.42□□□□□ -1.06
COL28A1-202ENST00000430711 ST7Q9NRC1 585 aa8.42□□□□□ -1.06
COL28A1-202ENST00000430711 RCOR1Q9UKL0 485 aa8.42□□□□□ -1.06
COL28A1-202ENST00000430711 TACC3Q9Y6A5 838 aa8.42□□□□□ -1.06
COL28A1-202ENST00000430711 C4AP0C0L4 1744 aa8.42□□□□□ -1.06
COL28A1-202ENST00000430711 C4BP0C0L5 1744 aa8.42□□□□□ -1.06
COL28A1-202ENST00000430711 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.42□□□□□ -1.06
COL28A1-202ENST00000430711 KCPQ6ZWJ8 1503 aa8.42□□□□□ -1.06
COL28A1-202ENST00000430711 TATP17735 454 aaPredicted RBP8.42□□□□□ -1.06
COL28A1-202ENST00000430711 LRRC8AQ8IWT6 810 aa8.42□□□□□ -1.06
COL28A1-202ENST00000430711 IFNL2Q8IZJ0 200 aa8.42□□□□□ -1.06
COL28A1-202ENST00000430711 SMIM22K7EJ46 135 aa8.41□□□□□ -1.06
COL28A1-202ENST00000430711 ME1P48163 572 aa8.41□□□□□ -1.06
COL28A1-202ENST00000430711 FMR1NBQ8N0W7 255 aaPredicted RBP8.41□□□□□ -1.06
COL28A1-202ENST00000430711 TTC5Q8N0Z6 440 aa8.41□□□□□ -1.06
COL28A1-202ENST00000430711 PDCL2Q8N4E4 241 aa8.41□□□□□ -1.06
COL28A1-202ENST00000430711 PLBD2Q8NHP8 589 aa8.41□□□□□ -1.06
COL28A1-202ENST00000430711 FAM89AQ96GI7 184 aa8.41□□□□□ -1.06
COL28A1-202ENST00000430711 AGXT2Q9BYV1 514 aa8.41□□□□□ -1.06
COL28A1-202ENST00000430711 HSD3B7Q9H2F3 369 aa8.41□□□□□ -1.06
COL28A1-202ENST00000430711 SHANK3Q9BYB0 1731 aa8.41□□□□□ -1.06
COL28A1-202ENST00000430711 TOGARAM1Q9Y4F4 1720 aa8.41□□□□□ -1.06
COL28A1-202ENST00000430711 ATRNO75882 1429 aa8.41□□□□□ -1.06
COL28A1-202ENST00000430711 CCDC69A6NI79 296 aa8.41□□□□□ -1.06
COL28A1-202ENST00000430711 WDHD1O75717 1129 aaPredicted RBP8.41□□□□□ -1.06
COL28A1-202ENST00000430711 GABBR2O75899 941 aa8.41□□□□□ -1.06
COL28A1-202ENST00000430711 IFIT1P09914 478 aaKnown RBP8.41□□□□□ -1.06
COL28A1-202ENST00000430711 ATP1A3P13637 1013 aa8.41□□□□□ -1.06
COL28A1-202ENST00000430711 MARCKSP29966 332 aaPredicted RBP8.41□□□□□ -1.06
COL28A1-202ENST00000430711 ZAP70P43403 619 aa8.41□□□□□ -1.06
COL28A1-202ENST00000430711 CABP4P57796 275 aa8.41□□□□□ -1.06
COL28A1-202ENST00000430711 STK11IPQ8N1F8 1099 aa8.41□□□□□ -1.06
COL28A1-202ENST00000430711 DPF2Q92785 391 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms