RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 MS4A4AQ96JQ5 239 aa10.44□□□□□ -0.74
CSTF1-203ENST00000428552 CDC5LQ99459 802 aaKnown RBP10.44□□□□□ -0.74
CSTF1-203ENST00000428552 MYH3P11055 1940 aa10.44□□□□□ -0.74
CSTF1-203ENST00000428552 ZNF804BA4D1E1 1349 aa10.43□□□□□ -0.74
CSTF1-203ENST00000428552 UNCXA6NJT0 531 aa10.43□□□□□ -0.74
CSTF1-203ENST00000428552 H0YGN5 161 aa10.43□□□□□ -0.74
CSTF1-203ENST00000428552 GTF2IP78347 998 aa10.43□□□□□ -0.74
CSTF1-203ENST00000428552 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.43□□□□□ -0.74
CSTF1-203ENST00000428552 LEMD3Q9Y2U8 911 aa10.43□□□□□ -0.74
CSTF1-203ENST00000428552 PTCH2Q9Y6C5 1203 aa10.43□□□□□ -0.74
CSTF1-203ENST00000428552 TRIOBPQ9H2D6 2365 aa10.43□□□□□ -0.74
CSTF1-203ENST00000428552 A0A1B0GUL6 1792 aa10.42□□□□□ -0.74
CSTF1-203ENST00000428552 CLRN2A0PK11 232 aa10.42□□□□□ -0.74
CSTF1-203ENST00000428552 SNAP23O00161 211 aa10.42□□□□□ -0.74
CSTF1-203ENST00000428552 CDAN1Q8IWY9 1227 aa10.42□□□□□ -0.74
CSTF1-203ENST00000428552 RUNDC1Q96C34 613 aa10.42□□□□□ -0.74
CSTF1-203ENST00000428552 PRMT6Q96LA8 375 aaPredicted RBP10.42□□□□□ -0.74
CSTF1-203ENST00000428552 CD209Q9NNX6 404 aa10.42□□□□□ -0.74
CSTF1-203ENST00000428552 PPP2R3BQ9Y5P8 575 aa10.42□□□□□ -0.74
CSTF1-203ENST00000428552 SPDYE2BA6NHP3 402 aa10.41□□□□□ -0.74
CSTF1-203ENST00000428552 ELL2O00472 640 aaPredicted RBP10.41□□□□□ -0.74
CSTF1-203ENST00000428552 PPP1R12BO60237 982 aaPredicted RBP10.41□□□□□ -0.74
CSTF1-203ENST00000428552 SPDYE6P0CI01 402 aa10.41□□□□□ -0.74
CSTF1-203ENST00000428552 DLGAP5Q15398 846 aa10.41□□□□□ -0.74
CSTF1-203ENST00000428552 C8orf58Q8NAV2 365 aa10.41□□□□□ -0.74
CSTF1-203ENST00000428552 CNKSR2Q8WXI2 1034 aa10.41□□□□□ -0.74
CSTF1-203ENST00000428552 BRI3BPQ8WY22 251 aa10.41□□□□□ -0.74
CSTF1-203ENST00000428552 SHISA4Q96DD7 197 aa10.41□□□□□ -0.74
CSTF1-203ENST00000428552 PRO3102Q9H379 93 aa10.41□□□□□ -0.74
CSTF1-203ENST00000428552 MAP3K2Q9Y2U5 619 aa10.41□□□□□ -0.74
CSTF1-203ENST00000428552 GTF3C3Q9Y5Q9 886 aa10.41□□□□□ -0.74
CSTF1-203ENST00000428552 CEP290O15078 2479 aa10.41□□□□□ -0.74
CSTF1-203ENST00000428552 COL6A3P12111 3177 aa10.4□□□□□ -0.74
CSTF1-203ENST00000428552 H7C1W4 665 aa10.4□□□□□ -0.74
CSTF1-203ENST00000428552 CASP7P55210 303 aa10.4□□□□□ -0.74
CSTF1-203ENST00000428552 CWF19L2Q2TBE0 894 aaKnown RBP10.4□□□□□ -0.74
CSTF1-203ENST00000428552 CFAP100Q494V2 611 aa10.4□□□□□ -0.74
CSTF1-203ENST00000428552 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.4□□□□□ -0.74
CSTF1-203ENST00000428552 OPTNQ96CV9 577 aa10.4□□□□□ -0.74
CSTF1-203ENST00000428552 TEPSINQ96N21 525 aa10.4□□□□□ -0.74
CSTF1-203ENST00000428552 TMEM106CQ9BVX2 250 aa10.4□□□□□ -0.74
CSTF1-203ENST00000428552 ARHGAP39Q9C0H5 1083 aa10.4□□□□□ -0.74
CSTF1-203ENST00000428552 PI4KAP2A4QPH2 592 aa10.39□□□□□ -0.75
CSTF1-203ENST00000428552 NEURL1BA8MQ27 555 aa10.39□□□□□ -0.75
CSTF1-203ENST00000428552 ITGA6P23229 1130 aa10.39□□□□□ -0.75
CSTF1-203ENST00000428552 IREB2P48200 963 aaKnown RBP10.39□□□□□ -0.75
CSTF1-203ENST00000428552 CHRNDQ07001 517 aa10.39□□□□□ -0.75
CSTF1-203ENST00000428552 RASA3Q14644 834 aa10.39□□□□□ -0.75
CSTF1-203ENST00000428552 SUPT20HL1Q3ZLR7 823 aa10.39□□□□□ -0.75
CSTF1-203ENST00000428552 SLC9C1Q4G0N8 1177 aa10.39□□□□□ -0.75
CSTF1-203ENST00000428552 KSR2Q6VAB6 950 aa10.39□□□□□ -0.75
CSTF1-203ENST00000428552 CHRDL2Q6WN34 429 aa10.39□□□□□ -0.75
CSTF1-203ENST00000428552 C15orf52Q6ZUT6 534 aaKnown RBP10.39□□□□□ -0.75
CSTF1-203ENST00000428552 ANKRD13AQ8IZ07 590 aa10.39□□□□□ -0.75
CSTF1-203ENST00000428552 FAM43AQ8N2R8 423 aa10.39□□□□□ -0.75
CSTF1-203ENST00000428552 PI4KAP1Q8N8J0 262 aa10.39□□□□□ -0.75
CSTF1-203ENST00000428552 SH3TC2Q8TF17 1288 aa10.39□□□□□ -0.75
CSTF1-203ENST00000428552 PLA2G12BQ9BX93 195 aa10.39□□□□□ -0.75
CSTF1-203ENST00000428552 ELP3Q9H9T3 547 aa10.39□□□□□ -0.75
CSTF1-203ENST00000428552 RBM27Q9P2N5 1060 aaKnown RBP10.39□□□□□ -0.75
CSTF1-203ENST00000428552 ADAMTS8Q9UP79 889 aa10.39□□□□□ -0.75
CSTF1-203ENST00000428552 LAMA3Q16787 3333 aa10.38□□□□□ -0.75
CSTF1-203ENST00000428552 F8W031 263 aaPredicted RBP10.38□□□□□ -0.75
CSTF1-203ENST00000428552 MYCP01106 439 aaPredicted RBP10.38□□□□□ -0.75
CSTF1-203ENST00000428552 CSF1RP07333 972 aa10.38□□□□□ -0.75
CSTF1-203ENST00000428552 IL1R1P14778 569 aa10.38□□□□□ -0.75
CSTF1-203ENST00000428552 RALBP1Q15311 655 aa10.38□□□□□ -0.75
CSTF1-203ENST00000428552 OTUD7BQ6GQQ9 843 aa10.38□□□□□ -0.75
CSTF1-203ENST00000428552 UBE3BQ7Z3V4 1068 aa10.38□□□□□ -0.75
CSTF1-203ENST00000428552 UBE2Q1Q7Z7E8 422 aa10.38□□□□□ -0.75
CSTF1-203ENST00000428552 TSPYL6Q8N831 410 aa10.38□□□□□ -0.75
CSTF1-203ENST00000428552 ANKRD2Q9GZV1 360 aa10.38□□□□□ -0.75
CSTF1-203ENST00000428552 IFT57Q9NWB7 429 aa10.38□□□□□ -0.75
CSTF1-203ENST00000428552 ARAP2Q8WZ64 1704 aa10.38□□□□□ -0.75
CSTF1-203ENST00000428552 TAF5LO75529 589 aa10.37□□□□□ -0.75
CSTF1-203ENST00000428552 CTGFP29279 349 aa10.37□□□□□ -0.75
CSTF1-203ENST00000428552 IGHMBP2P38935 993 aaKnown RBP10.37□□□□□ -0.75
CSTF1-203ENST00000428552 FKBP1AP62942 108 aaKnown RBP10.37□□□□□ -0.75
CSTF1-203ENST00000428552 VGLL4Q14135 290 aa10.37□□□□□ -0.75
CSTF1-203ENST00000428552 TAF1CQ15572 869 aaPredicted RBP10.37□□□□□ -0.75
CSTF1-203ENST00000428552 SLC4A8Q2Y0W8 1093 aa10.37□□□□□ -0.75
CSTF1-203ENST00000428552 G2E3Q7L622 706 aa10.37□□□□□ -0.75
CSTF1-203ENST00000428552 VEZTQ9HBM0 779 aa10.37□□□□□ -0.75
CSTF1-203ENST00000428552 JAG2Q9Y219 1238 aa10.37□□□□□ -0.75
CSTF1-203ENST00000428552 A0A0C4DFX4 3053 aa10.36□□□□□ -0.75
CSTF1-203ENST00000428552 CCL15-CCL14A0A0B4J2E2 113 aa10.36□□□□□ -0.75
CSTF1-203ENST00000428552 DDX58O95786 925 aaKnown RBP10.36□□□□□ -0.75
CSTF1-203ENST00000428552 MTFR1Q15390 333 aa10.36□□□□□ -0.75
CSTF1-203ENST00000428552 CCL15Q16663 113 aa10.36□□□□□ -0.75
CSTF1-203ENST00000428552 SPDYE2Q495Y8 402 aa10.36□□□□□ -0.75
CSTF1-203ENST00000428552 NBPF11Q86T75 865 aa10.36□□□□□ -0.75
CSTF1-203ENST00000428552 HELBQ8NG08 1087 aaPredicted RBP10.36□□□□□ -0.75
CSTF1-203ENST00000428552 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.36□□□□□ -0.75
CSTF1-203ENST00000428552 ZFYVE28Q9HCC9 887 aa10.36□□□□□ -0.75
CSTF1-203ENST00000428552 ZNF70Q9UC06 446 aaPredicted RBP10.36□□□□□ -0.75
CSTF1-203ENST00000428552 MYBBP1AQ9BQG0 1328 aaKnown RBP10.35□□□□□ -0.75
CSTF1-203ENST00000428552 DLL1O00548 723 aa10.35□□□□□ -0.75
CSTF1-203ENST00000428552 TLR2O60603 784 aa10.35□□□□□ -0.75
CSTF1-203ENST00000428552 GNAI1P63096 354 aa10.35□□□□□ -0.75
CSTF1-203ENST00000428552 LACTBP83111 547 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms