RNA–Protein interactions for RNA: ENST00000428120.5

FAAP20-209, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 2,313 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-209ENST00000428120 RFC4P35249 363 aa27.56■■■□□ 2
FAAP20-209ENST00000428120 FGD1P98174 961 aa27.56■■■□□ 2
FAAP20-209ENST00000428120 NYXQ9GZU5 481 aa27.56■■■□□ 2
FAAP20-209ENST00000428120 IQSEC3Q9UPP2 1182 aaPredicted RBP27.56■■■□□ 2
FAAP20-209ENST00000428120 RGL2O15211 777 aa27.56■■■□□ 2
FAAP20-209ENST00000428120 BRF1Q92994 677 aa27.56■■■□□ 2
FAAP20-209ENST00000428120 NCLP19338 710 aaKnown RBP27.55■■■□□ 2
FAAP20-209ENST00000428120 SLC10A5Q5PT55 438 aa27.55■■■□□ 2
FAAP20-209ENST00000428120 CHST3Q7LGC8 479 aa27.55■■■□□ 2
FAAP20-209ENST00000428120 C4BP0C0L5 1744 aa27.55■■■□□ 2
FAAP20-209ENST00000428120 KLHL40Q2TBA0 621 aa27.55■■■□□ 2
FAAP20-209ENST00000428120 TRAPPC3LQ5T215 181 aa27.55■■■□□ 2
FAAP20-209ENST00000428120 DHX32Q7L7V1 743 aaKnown RBP27.55■■■□□ 2
FAAP20-209ENST00000428120 ZSCAN22P10073 491 aaPredicted RBP27.54■■■□□ 2
FAAP20-209ENST00000428120 HMGB1P09429 215 aaKnown RBP27.53■■■□□ 2
FAAP20-209ENST00000428120 UBE3CQ15386 1083 aa27.53■■■□□ 2
FAAP20-209ENST00000428120 TPTE2Q6XPS3 522 aa27.53■■■□□ 2
FAAP20-209ENST00000428120 NLRP3Q96P20 1036 aa27.53■■■□□ 2
FAAP20-209ENST00000428120 BSDC1Q9NW68 430 aaPredicted RBP27.53■■■□□ 2
FAAP20-209ENST00000428120 NPHP1O15259 732 aa27.52■■■□□ 2
FAAP20-209ENST00000428120 GDPD2Q9HCC8 539 aa27.52■■■□□ 2
FAAP20-209ENST00000428120 CTNNA3Q9UI47 895 aa27.52■■■□□ 2
FAAP20-209ENST00000428120 TCRBV5S4A2TA0A5A2 114 aa27.52■■■□□ 2
FAAP20-209ENST00000428120 IMMTQ16891 758 aaKnown RBP27.52■■■□□ 2
FAAP20-209ENST00000428120 MAGEB6Q8N7X4 407 aa27.52■■■□□ 2
FAAP20-209ENST00000428120 MINPP1Q9UNW1 487 aa27.52■■■□□ 2
FAAP20-209ENST00000428120 GYG1P46976 350 aa27.51■■□□□ 1.99
FAAP20-209ENST00000428120 C4AP0C0L4 1744 aa27.51■■□□□ 1.99
FAAP20-209ENST00000428120 COL24A1Q17RW2 1714 aa27.51■■□□□ 1.99
FAAP20-209ENST00000428120 GOLGA6L3A6NEY3 463 aa27.5■■□□□ 1.99
FAAP20-209ENST00000428120 GPT2Q8TD30 523 aa27.5■■□□□ 1.99
FAAP20-209ENST00000428120 VPS37CA5D8V6 355 aaPredicted RBP27.5■■□□□ 1.99
FAAP20-209ENST00000428120 APPP05067 770 aa27.5■■□□□ 1.99
FAAP20-209ENST00000428120 EXOSC10Q01780 885 aaKnown RBP27.5■■□□□ 1.99
FAAP20-209ENST00000428120 GTF3C6Q969F1 213 aa27.5■■□□□ 1.99
FAAP20-209ENST00000428120 MTMR6Q9Y217 621 aa27.5■■□□□ 1.99
FAAP20-209ENST00000428120 TCHHQ07283 1943 aa27.5■■□□□ 1.99
FAAP20-209ENST00000428120 TRIM37O94972 964 aa27.49■■□□□ 1.99
FAAP20-209ENST00000428120 APOBRQ0VD83 1088 aa27.49■■□□□ 1.99
FAAP20-209ENST00000428120 MAP3K12Q12852 859 aa27.49■■□□□ 1.99
FAAP20-209ENST00000428120 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.49■■□□□ 1.99
FAAP20-209ENST00000428120 CAVIN1Q6NZI2 390 aaKnown RBP27.49■■□□□ 1.99
FAAP20-209ENST00000428120 F13A1P00488 732 aa27.48■■□□□ 1.99
FAAP20-209ENST00000428120 RPS8P62241 208 aaKnown RBP27.48■■□□□ 1.99
FAAP20-209ENST00000428120 KRT27Q7Z3Y8 459 aa27.48■■□□□ 1.99
FAAP20-209ENST00000428120 AIDAQ96BJ3 306 aa27.48■■□□□ 1.99
FAAP20-209ENST00000428120 FSD2A1L4K1 749 aa27.47■■□□□ 1.99
FAAP20-209ENST00000428120 JAK2O60674 1132 aa27.47■■□□□ 1.99
FAAP20-209ENST00000428120 LARP1BQ659C4 914 aaKnown RBP27.47■■□□□ 1.99
FAAP20-209ENST00000428120 NSFL1CQ9UNZ2 370 aaKnown RBP27.47■■□□□ 1.99
FAAP20-209ENST00000428120 ZNF213O14771 459 aa27.47■■□□□ 1.99
FAAP20-209ENST00000428120 NFIXQ14938 502 aa27.47■■□□□ 1.99
FAAP20-209ENST00000428120 NAP1L2Q9ULW6 460 aaPredicted RBP27.46■■□□□ 1.99
FAAP20-209ENST00000428120 A0A1B0GUL6 1792 aa27.46■■□□□ 1.99
FAAP20-209ENST00000428120 SCRN1Q12765 414 aa27.46■■□□□ 1.99
FAAP20-209ENST00000428120 GPHNQ9NQX3 736 aaPredicted RBP27.46■■□□□ 1.99
FAAP20-209ENST00000428120 STRBPQ96SI9 672 aaKnown RBP27.45■■□□□ 1.99
FAAP20-209ENST00000428120 CNPY2Q9Y2B0 182 aa27.45■■□□□ 1.99
FAAP20-209ENST00000428120 BRWD3Q6RI45 1802 aa27.45■■□□□ 1.98
FAAP20-209ENST00000428120 MBD4O95243 580 aa27.45■■□□□ 1.98
FAAP20-209ENST00000428120 KLRK1P26718 216 aa27.45■■□□□ 1.98
FAAP20-209ENST00000428120 UBE4AQ14139 1066 aa27.45■■□□□ 1.98
FAAP20-209ENST00000428120 LRP2BPQ9P2M1 347 aa27.45■■□□□ 1.98
FAAP20-209ENST00000428120 RBM27Q9P2N5 1060 aaKnown RBP27.45■■□□□ 1.98
FAAP20-209ENST00000428120 DOCK2Q92608 1830 aa27.44■■□□□ 1.98
FAAP20-209ENST00000428120 ARMT1Q9H993 441 aa27.44■■□□□ 1.98
FAAP20-209ENST00000428120 ZNF804BA4D1E1 1349 aa27.44■■□□□ 1.98
FAAP20-209ENST00000428120 GAS2L3Q86XJ1 694 aa27.44■■□□□ 1.98
FAAP20-209ENST00000428120 VPS37DQ86XT2 251 aa27.44■■□□□ 1.98
FAAP20-209ENST00000428120 NBPF3Q9H094 633 aa27.44■■□□□ 1.98
FAAP20-209ENST00000428120 ABCF2Q9UG63 623 aa27.44■■□□□ 1.98
FAAP20-209ENST00000428120 DENND2AQ9ULE3 1009 aa27.44■■□□□ 1.98
FAAP20-209ENST00000428120 CDC37L1Q7L3B6 337 aa27.43■■□□□ 1.98
FAAP20-209ENST00000428120 AGXT2Q9BYV1 514 aa27.43■■□□□ 1.98
FAAP20-209ENST00000428120 CARMIL3Q8ND23 1372 aa27.43■■□□□ 1.98
FAAP20-209ENST00000428120 TM4SF1P30408 202 aa27.42■■□□□ 1.98
FAAP20-209ENST00000428120 CCT2P78371 535 aaKnown RBP27.42■■□□□ 1.98
FAAP20-209ENST00000428120 USP48Q86UV5 1035 aa27.42■■□□□ 1.98
FAAP20-209ENST00000428120 SLC51AQ86UW1 340 aa27.42■■□□□ 1.98
FAAP20-209ENST00000428120 DDX11Q96FC9 970 aa27.42■■□□□ 1.98
FAAP20-209ENST00000428120 TNRC6CQ9HCJ0 1690 aaKnown RBP27.42■■□□□ 1.98
FAAP20-209ENST00000428120 L1TD1Q5T7N2 865 aaKnown RBP27.42■■□□□ 1.98
FAAP20-209ENST00000428120 FERMT3Q86UX7 667 aa27.42■■□□□ 1.98
FAAP20-209ENST00000428120 FAM84BQ96KN1 310 aaPredicted RBP27.42■■□□□ 1.98
FAAP20-209ENST00000428120 BRPF3Q9ULD4 1205 aa27.42■■□□□ 1.98
FAAP20-209ENST00000428120 COL1A1P02452 1464 aaPredicted RBP27.42■■□□□ 1.98
FAAP20-209ENST00000428120 PFKFB2O60825 505 aa27.41■■□□□ 1.98
FAAP20-209ENST00000428120 CAVIN4Q5BKX8 364 aa27.41■■□□□ 1.98
FAAP20-209ENST00000428120 TBC1D10CQ8IV04 446 aa27.41■■□□□ 1.98
FAAP20-209ENST00000428120 MIGA1Q8NAN2 632 aa27.41■■□□□ 1.98
FAAP20-209ENST00000428120 GADD45BO75293 160 aaPredicted RBP27.41■■□□□ 1.98
FAAP20-209ENST00000428120 TPRNQ4KMQ1 711 aa27.41■■□□□ 1.98
FAAP20-209ENST00000428120 RALYLQ86SE5 291 aaKnown RBP27.41■■□□□ 1.98
FAAP20-209ENST00000428120 CNBD1Q8NA66 436 aa27.41■■□□□ 1.98
FAAP20-209ENST00000428120 NCOA5Q9HCD5 579 aaKnown RBP27.41■■□□□ 1.98
FAAP20-209ENST00000428120 GNL3LQ9NVN8 582 aaKnown RBP27.41■■□□□ 1.98
FAAP20-209ENST00000428120 PRC1O43663 620 aa27.4■■□□□ 1.98
FAAP20-209ENST00000428120 PPFIA3O75145 1194 aa27.4■■□□□ 1.98
FAAP20-209ENST00000428120 MB21D2Q8IYB1 491 aaPredicted RBP27.4■■□□□ 1.98
FAAP20-209ENST00000428120 NCOA7Q8NI08 942 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms