RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 STX6O43752 255 aa25.84■■□□□ 1.73
CNEP1R1-202ENST00000427478 PRPF40AO75400 957 aaKnown RBP25.84■■□□□ 1.73
CNEP1R1-202ENST00000427478 PDE6AP16499 860 aa25.84■■□□□ 1.73
CNEP1R1-202ENST00000427478 STK3Q13188 491 aa25.84■■□□□ 1.73
CNEP1R1-202ENST00000427478 CELF1Q92879 486 aaKnown RBP25.84■■□□□ 1.73
CNEP1R1-202ENST00000427478 UBE3CQ15386 1083 aa25.84■■□□□ 1.73
CNEP1R1-202ENST00000427478 TRAPPC3LQ5T215 181 aa25.84■■□□□ 1.73
CNEP1R1-202ENST00000427478 BSDC1Q9NW68 430 aaPredicted RBP25.84■■□□□ 1.73
CNEP1R1-202ENST00000427478 CTNNA3Q9UI47 895 aa25.84■■□□□ 1.73
CNEP1R1-202ENST00000427478 KLHL40Q2TBA0 621 aa25.83■■□□□ 1.73
CNEP1R1-202ENST00000427478 FOXD4L6Q3SYB3 417 aaPredicted RBP25.83■■□□□ 1.73
CNEP1R1-202ENST00000427478 FOXD4L3Q6VB84 417 aaPredicted RBP25.83■■□□□ 1.73
CNEP1R1-202ENST00000427478 DHX32Q7L7V1 743 aaKnown RBP25.83■■□□□ 1.73
CNEP1R1-202ENST00000427478 NLRP3Q96P20 1036 aa25.83■■□□□ 1.73
CNEP1R1-202ENST00000427478 TNRC6CQ9HCJ0 1690 aaKnown RBP25.83■■□□□ 1.73
CNEP1R1-202ENST00000427478 UBR3Q6ZT12 1888 aa25.83■■□□□ 1.72
CNEP1R1-202ENST00000427478 FGAP02671 866 aa25.82■■□□□ 1.72
CNEP1R1-202ENST00000427478 HAND2P61296 217 aa25.82■■□□□ 1.72
CNEP1R1-202ENST00000427478 FGD1P98174 961 aa25.82■■□□□ 1.72
CNEP1R1-202ENST00000427478 TPTE2Q6XPS3 522 aa25.82■■□□□ 1.72
CNEP1R1-202ENST00000427478 ZSCAN22P10073 491 aaPredicted RBP25.82■■□□□ 1.72
CNEP1R1-202ENST00000427478 TCRBV5S4A2TA0A5A2 114 aa25.81■■□□□ 1.72
CNEP1R1-202ENST00000427478 IMMTQ16891 758 aaKnown RBP25.81■■□□□ 1.72
CNEP1R1-202ENST00000427478 BRF1Q92994 677 aa25.81■■□□□ 1.72
CNEP1R1-202ENST00000427478 TCHHQ07283 1943 aa25.81■■□□□ 1.72
CNEP1R1-202ENST00000427478 MINPP1Q9UNW1 487 aa25.81■■□□□ 1.72
CNEP1R1-202ENST00000427478 WTIPA6NIX2 430 aaPredicted RBP25.79■■□□□ 1.72
CNEP1R1-202ENST00000427478 NPHP1O15259 732 aa25.79■■□□□ 1.72
CNEP1R1-202ENST00000427478 MAP3K12Q12852 859 aa25.79■■□□□ 1.72
CNEP1R1-202ENST00000427478 EXOSC10Q01780 885 aaKnown RBP25.79■■□□□ 1.72
CNEP1R1-202ENST00000427478 MAGEB6Q8N7X4 407 aa25.79■■□□□ 1.72
CNEP1R1-202ENST00000427478 KRT27Q7Z3Y8 459 aa25.78■■□□□ 1.72
CNEP1R1-202ENST00000427478 GTF3C6Q969F1 213 aa25.78■■□□□ 1.72
CNEP1R1-202ENST00000427478 IQSEC3Q9UPP2 1182 aaPredicted RBP25.78■■□□□ 1.72
CNEP1R1-202ENST00000427478 EP400Q96L91 3159 aa25.78■■□□□ 1.72
CNEP1R1-202ENST00000427478 NCLP19338 710 aaKnown RBP25.78■■□□□ 1.72
CNEP1R1-202ENST00000427478 GYG1P46976 350 aa25.78■■□□□ 1.72
CNEP1R1-202ENST00000427478 UBE4AQ14139 1066 aa25.78■■□□□ 1.72
CNEP1R1-202ENST00000427478 CHST3Q7LGC8 479 aa25.78■■□□□ 1.72
CNEP1R1-202ENST00000427478 CARMIL3Q8ND23 1372 aa25.77■■□□□ 1.72
CNEP1R1-202ENST00000427478 GOLGA6L3A6NEY3 463 aa25.77■■□□□ 1.72
CNEP1R1-202ENST00000427478 F13A1P00488 732 aa25.77■■□□□ 1.72
CNEP1R1-202ENST00000427478 MTMR6Q9Y217 621 aa25.77■■□□□ 1.72
CNEP1R1-202ENST00000427478 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.76■■□□□ 1.71
CNEP1R1-202ENST00000427478 RPS8P62241 208 aaKnown RBP25.76■■□□□ 1.71
CNEP1R1-202ENST00000427478 AIDAQ96BJ3 306 aa25.76■■□□□ 1.71
CNEP1R1-202ENST00000427478 ZNF804BA4D1E1 1349 aa25.76■■□□□ 1.71
CNEP1R1-202ENST00000427478 ZNF213O14771 459 aa25.76■■□□□ 1.71
CNEP1R1-202ENST00000427478 TRIM37O94972 964 aa25.76■■□□□ 1.71
CNEP1R1-202ENST00000427478 NFIXQ14938 502 aa25.76■■□□□ 1.71
CNEP1R1-202ENST00000427478 FSD2A1L4K1 749 aa25.75■■□□□ 1.71
CNEP1R1-202ENST00000427478 VPS37CA5D8V6 355 aaPredicted RBP25.75■■□□□ 1.71
CNEP1R1-202ENST00000427478 APPP05067 770 aa25.75■■□□□ 1.71
CNEP1R1-202ENST00000427478 APOBRQ0VD83 1088 aa25.75■■□□□ 1.71
CNEP1R1-202ENST00000427478 GPT2Q8TD30 523 aa25.75■■□□□ 1.71
CNEP1R1-202ENST00000427478 ADRA2BP18089 450 aa25.75■■□□□ 1.71
CNEP1R1-202ENST00000427478 AGXT2Q9BYV1 514 aa25.75■■□□□ 1.71
CNEP1R1-202ENST00000427478 COL1A1P02452 1464 aaPredicted RBP25.74■■□□□ 1.71
CNEP1R1-202ENST00000427478 L1TD1Q5T7N2 865 aaKnown RBP25.74■■□□□ 1.71
CNEP1R1-202ENST00000427478 LARP1BQ659C4 914 aaKnown RBP25.74■■□□□ 1.71
CNEP1R1-202ENST00000427478 STRBPQ96SI9 672 aaKnown RBP25.74■■□□□ 1.71
CNEP1R1-202ENST00000427478 GDPD2Q9HCC8 539 aa25.74■■□□□ 1.71
CNEP1R1-202ENST00000427478 MYH13Q9UKX3 1938 aa25.74■■□□□ 1.71
CNEP1R1-202ENST00000427478 GNL3LQ9NVN8 582 aaKnown RBP25.73■■□□□ 1.71
CNEP1R1-202ENST00000427478 MBD4O95243 580 aa25.73■■□□□ 1.71
CNEP1R1-202ENST00000427478 SCRN1Q12765 414 aa25.73■■□□□ 1.71
CNEP1R1-202ENST00000427478 CAVIN1Q6NZI2 390 aaKnown RBP25.73■■□□□ 1.71
CNEP1R1-202ENST00000427478 LRP2BPQ9P2M1 347 aa25.73■■□□□ 1.71
CNEP1R1-202ENST00000427478 JAK2O60674 1132 aa25.72■■□□□ 1.71
CNEP1R1-202ENST00000427478 CAVIN4Q5BKX8 364 aa25.72■■□□□ 1.71
CNEP1R1-202ENST00000427478 SLC27A3Q5K4L6 730 aa25.72■■□□□ 1.71
CNEP1R1-202ENST00000427478 VPS37DQ86XT2 251 aa25.72■■□□□ 1.71
CNEP1R1-202ENST00000427478 PFKFB2O60825 505 aa25.72■■□□□ 1.71
CNEP1R1-202ENST00000427478 CNBD1Q8NA66 436 aa25.72■■□□□ 1.71
CNEP1R1-202ENST00000427478 CHD4Q14839 1912 aa25.71■■□□□ 1.71
CNEP1R1-202ENST00000427478 PDCP20941 246 aa25.71■■□□□ 1.71
CNEP1R1-202ENST00000427478 TM4SF1P30408 202 aa25.71■■□□□ 1.71
CNEP1R1-202ENST00000427478 MB21D2Q8IYB1 491 aaPredicted RBP25.71■■□□□ 1.71
CNEP1R1-202ENST00000427478 NCOA7Q8NI08 942 aa25.71■■□□□ 1.71
CNEP1R1-202ENST00000427478 NBPF3Q9H094 633 aa25.71■■□□□ 1.71
CNEP1R1-202ENST00000427478 ARMT1Q9H993 441 aa25.71■■□□□ 1.71
CNEP1R1-202ENST00000427478 CNPY2Q9Y2B0 182 aa25.71■■□□□ 1.71
CNEP1R1-202ENST00000427478 ATP6V1DQ9Y5K8 247 aa25.71■■□□□ 1.71
CNEP1R1-202ENST00000427478 RALYLQ86SE5 291 aaKnown RBP25.7■■□□□ 1.71
CNEP1R1-202ENST00000427478 NAP1L2Q9ULW6 460 aaPredicted RBP25.7■■□□□ 1.71
CNEP1R1-202ENST00000427478 KLRK1P26718 216 aa25.7■■□□□ 1.7
CNEP1R1-202ENST00000427478 FAM84BQ96KN1 310 aaPredicted RBP25.7■■□□□ 1.7
CNEP1R1-202ENST00000427478 ABCF2Q9UG63 623 aa25.7■■□□□ 1.7
CNEP1R1-202ENST00000427478 NSFL1CQ9UNZ2 370 aaKnown RBP25.7■■□□□ 1.7
CNEP1R1-202ENST00000427478 CDC37L1Q7L3B6 337 aa25.69■■□□□ 1.7
CNEP1R1-202ENST00000427478 USP48Q86UV5 1035 aa25.69■■□□□ 1.7
CNEP1R1-202ENST00000427478 TBC1D10CQ8IV04 446 aa25.69■■□□□ 1.7
CNEP1R1-202ENST00000427478 PRC1O43663 620 aa25.69■■□□□ 1.7
CNEP1R1-202ENST00000427478 MCM5P33992 734 aa25.69■■□□□ 1.7
CNEP1R1-202ENST00000427478 ANKRD2Q9GZV1 360 aa25.69■■□□□ 1.7
CNEP1R1-202ENST00000427478 GPHNQ9NQX3 736 aaPredicted RBP25.69■■□□□ 1.7
CNEP1R1-202ENST00000427478 GYS1P13807 737 aa25.68■■□□□ 1.7
CNEP1R1-202ENST00000427478 EPB41L4AQ9HCS5 686 aaPredicted RBP25.68■■□□□ 1.7
CNEP1R1-202ENST00000427478 RBM27Q9P2N5 1060 aaKnown RBP25.68■■□□□ 1.7
CNEP1R1-202ENST00000427478 MBD3O95983 291 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms