RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 FAM205AQ6ZU69 1335 aa18.78■□□□□ 0.6
COL11A1-204ENST00000427239 FZD9O00144 591 aa18.77■□□□□ 0.6
COL11A1-204ENST00000427239 STRIP1Q5VSL9 837 aa18.77■□□□□ 0.6
COL11A1-204ENST00000427239 TSHZ3Q63HK5 1081 aa18.77■□□□□ 0.6
COL11A1-204ENST00000427239 WDR66Q8TBY9 1149 aa18.77■□□□□ 0.6
COL11A1-204ENST00000427239 RNF181Q9P0P0 153 aa18.77■□□□□ 0.6
COL11A1-204ENST00000427239 USP17L3A6NCW0 530 aa18.77■□□□□ 0.59
COL11A1-204ENST00000427239 USP17L4A6NCW7 530 aa18.77■□□□□ 0.59
COL11A1-204ENST00000427239 YDJCA8MPS7 323 aa18.77■□□□□ 0.59
COL11A1-204ENST00000427239 GTF2IP78347 998 aa18.77■□□□□ 0.59
COL11A1-204ENST00000427239 SCARF1Q14162 830 aa18.77■□□□□ 0.59
COL11A1-204ENST00000427239 C9orf131Q5VYM1 1079 aa18.77■□□□□ 0.59
COL11A1-204ENST00000427239 USP17L1Q7RTZ2 530 aa18.77■□□□□ 0.59
COL11A1-204ENST00000427239 TBC1D22AQ8WUA7 517 aa18.77■□□□□ 0.59
COL11A1-204ENST00000427239 RGS3P49796 1198 aa18.76■□□□□ 0.59
COL11A1-204ENST00000427239 EIF6P56537 245 aaKnown RBP18.76■□□□□ 0.59
COL11A1-204ENST00000427239 TNIP1Q15025 636 aa18.76■□□□□ 0.59
COL11A1-204ENST00000427239 TTF1Q15361 905 aaPredicted RBP18.75■□□□□ 0.59
COL11A1-204ENST00000427239 ZGPATQ8N5A5 531 aaKnown RBP18.75■□□□□ 0.59
COL11A1-204ENST00000427239 KCNQ5Q9NR82 932 aa18.75■□□□□ 0.59
COL11A1-204ENST00000427239 SNRKQ9NRH2 765 aa18.75■□□□□ 0.59
COL11A1-204ENST00000427239 ZC3H4Q9UPT8 1303 aaKnown RBP18.75■□□□□ 0.59
COL11A1-204ENST00000427239 IGSF3O75054 1194 aa18.74■□□□□ 0.59
COL11A1-204ENST00000427239 ZAP70P43403 619 aa18.74■□□□□ 0.59
COL11A1-204ENST00000427239 FKBP1AP62942 108 aaKnown RBP18.74■□□□□ 0.59
COL11A1-204ENST00000427239 CXCL9Q07325 125 aa18.74■□□□□ 0.59
COL11A1-204ENST00000427239 CHAF1AQ13111 956 aaPredicted RBP18.74■□□□□ 0.59
COL11A1-204ENST00000427239 PI16Q6UXB8 463 aa18.74■□□□□ 0.59
COL11A1-204ENST00000427239 DNAJC2Q99543 621 aaKnown RBP18.74■□□□□ 0.59
COL11A1-204ENST00000427239 SALL1Q9NSC2 1324 aa18.74■□□□□ 0.59
COL11A1-204ENST00000427239 CYP2E1P05181 493 aaPredicted RBP18.74■□□□□ 0.59
COL11A1-204ENST00000427239 VIL1P09327 827 aaKnown RBP18.74■□□□□ 0.59
COL11A1-204ENST00000427239 TTC22Q5TAA0 569 aa18.74■□□□□ 0.59
COL11A1-204ENST00000427239 CIAPIN1Q6FI81 312 aa18.74■□□□□ 0.59
COL11A1-204ENST00000427239 SKAP1Q86WV1 359 aa18.74■□□□□ 0.59
COL11A1-204ENST00000427239 PAG1Q9NWQ8 432 aa18.74■□□□□ 0.59
COL11A1-204ENST00000427239 COL4A5P29400 1685 aa18.74■□□□□ 0.59
COL11A1-204ENST00000427239 RAD17O75943 681 aa18.73■□□□□ 0.59
COL11A1-204ENST00000427239 DACT2Q5SW24 774 aa18.73■□□□□ 0.59
COL11A1-204ENST00000427239 SPTY2D1Q68D10 685 aaPredicted RBP18.73■□□□□ 0.59
COL11A1-204ENST00000427239 SUGT1Q9Y2Z0 365 aa18.73■□□□□ 0.59
COL11A1-204ENST00000427239 SBF1O95248 1867 aa18.73■□□□□ 0.59
COL11A1-204ENST00000427239 GOLIM4O00461 696 aa18.72■□□□□ 0.59
COL11A1-204ENST00000427239 MFSD14BQ5SR56 506 aa18.72■□□□□ 0.59
COL11A1-204ENST00000427239 FBXW7Q969H0 707 aa18.72■□□□□ 0.59
COL11A1-204ENST00000427239 MYO3BQ8WXR4 1341 aa18.72■□□□□ 0.59
COL11A1-204ENST00000427239 PSMD14O00487 310 aa18.71■□□□□ 0.59
COL11A1-204ENST00000427239 TICAM2Q86XR7 235 aa18.71■□□□□ 0.59
COL11A1-204ENST00000427239 EVI5LQ96CN4 794 aa18.71■□□□□ 0.59
COL11A1-204ENST00000427239 NDUFB9Q9Y6M9 179 aa18.71■□□□□ 0.59
COL11A1-204ENST00000427239 TRIM6-TRIM34B2RNG4 842 aa18.71■□□□□ 0.59
COL11A1-204ENST00000427239 DPY19L2Q6NUT2 758 aa18.71■□□□□ 0.59
COL11A1-204ENST00000427239 RSBN1LQ6PCB5 846 aaPredicted RBP18.71■□□□□ 0.59
COL11A1-204ENST00000427239 CNTROBQ8N137 903 aa18.71■□□□□ 0.59
COL11A1-204ENST00000427239 LRP2BPQ9P2M1 347 aa18.71■□□□□ 0.59
COL11A1-204ENST00000427239 ABCF2Q9UG63 623 aa18.71■□□□□ 0.59
COL11A1-204ENST00000427239 JAG2Q9Y219 1238 aa18.71■□□□□ 0.59
COL11A1-204ENST00000427239 CHD4Q14839 1912 aa18.7■□□□□ 0.58
COL11A1-204ENST00000427239 COL1A1P02452 1464 aaPredicted RBP18.7■□□□□ 0.58
COL11A1-204ENST00000427239 BMP2KLQ5H9B9 411 aa18.7■□□□□ 0.58
COL11A1-204ENST00000427239 TMED8Q6PL24 325 aaPredicted RBP18.7■□□□□ 0.58
COL11A1-204ENST00000427239 TBC1D9Q6ZT07 1266 aa18.7■□□□□ 0.58
COL11A1-204ENST00000427239 GPC2Q8N158 579 aa18.7■□□□□ 0.58
COL11A1-204ENST00000427239 AGBL3Q8NEM8 1001 aa18.7■□□□□ 0.58
COL11A1-204ENST00000427239 ANTXR1Q9H6X2 564 aa18.7■□□□□ 0.58
COL11A1-204ENST00000427239 CCDC88AQ3V6T2 1871 aa18.7■□□□□ 0.58
COL11A1-204ENST00000427239 DICER1Q9UPY3 1922 aaKnown RBP18.7■□□□□ 0.58
COL11A1-204ENST00000427239 LDHBP07195 334 aaKnown RBP18.69■□□□□ 0.58
COL11A1-204ENST00000427239 RPS12P25398 132 aaKnown RBP18.69■□□□□ 0.58
COL11A1-204ENST00000427239 MMP14P50281 582 aa18.69■□□□□ 0.58
COL11A1-204ENST00000427239 ERICH6Q7L0X2 663 aa18.69■□□□□ 0.58
COL11A1-204ENST00000427239 KBTBD3Q8NAB2 608 aa18.69■□□□□ 0.58
COL11A1-204ENST00000427239 AKAP11Q9UKA4 1901 aa18.69■□□□□ 0.58
COL11A1-204ENST00000427239 MAP4K4O95819 1239 aaPredicted RBP18.69■□□□□ 0.58
COL11A1-204ENST00000427239 GSPT1P15170 499 aaKnown RBP18.69■□□□□ 0.58
COL11A1-204ENST00000427239 MAP3K12Q12852 859 aa18.69■□□□□ 0.58
COL11A1-204ENST00000427239 LRRFIP1Q32MZ4 808 aaKnown RBP18.69■□□□□ 0.58
COL11A1-204ENST00000427239 CERS5Q8N5B7 392 aa18.69■□□□□ 0.58
COL11A1-204ENST00000427239 EDC3Q96F86 508 aaKnown RBP18.69■□□□□ 0.58
COL11A1-204ENST00000427239 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.69■□□□□ 0.58
COL11A1-204ENST00000427239 DPF2Q92785 391 aa18.68■□□□□ 0.58
COL11A1-204ENST00000427239 RILPL2Q969X0 211 aa18.68■□□□□ 0.58
COL11A1-204ENST00000427239 GMLQ99445 158 aa18.68■□□□□ 0.58
COL11A1-204ENST00000427239 PIH1D3Q9NQM4 214 aaKnown RBP18.68■□□□□ 0.58
COL11A1-204ENST00000427239 IDH1O75874 414 aaKnown RBP18.67■□□□□ 0.58
COL11A1-204ENST00000427239 SDSP20132 328 aa18.67■□□□□ 0.58
COL11A1-204ENST00000427239 ZSCAN25Q6NSZ9 544 aa18.67■□□□□ 0.58
COL11A1-204ENST00000427239 MRIQ9BWK5 157 aa18.67■□□□□ 0.58
COL11A1-204ENST00000427239 RAI14Q9P0K7 980 aa18.67■□□□□ 0.58
COL11A1-204ENST00000427239 GJA3Q9Y6H8 435 aa18.67■□□□□ 0.58
COL11A1-204ENST00000427239 ZNF541Q9H0D2 1346 aa18.67■□□□□ 0.58
COL11A1-204ENST00000427239 SCN9AQ15858 1988 aa18.67■□□□□ 0.58
COL11A1-204ENST00000427239 PRDX5P30044 214 aa18.66■□□□□ 0.58
COL11A1-204ENST00000427239 OGFOD1Q8N543 542 aa18.66■□□□□ 0.58
COL11A1-204ENST00000427239 MXD3Q9BW11 206 aa18.66■□□□□ 0.58
COL11A1-204ENST00000427239 MAST3O60307 1309 aa18.66■□□□□ 0.58
COL11A1-204ENST00000427239 ZFYP08048 801 aaPredicted RBP18.66■□□□□ 0.58
COL11A1-204ENST00000427239 SLF2Q8IX21 1173 aa18.66■□□□□ 0.58
COL11A1-204ENST00000427239 FSD1Q9BTV5 496 aa18.66■□□□□ 0.58
COL11A1-204ENST00000427239 ZBTB12Q9Y330 459 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms