RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 NOM1Q5C9Z4 860 aaKnown RBP18.58■□□□□ 0.56
PKP4-205ENST00000426248 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.58■□□□□ 0.56
PKP4-205ENST00000426248 MORC2Q9Y6X9 1032 aaPredicted RBP18.58■□□□□ 0.56
PKP4-205ENST00000426248 RBM6P78332 1123 aaKnown RBP18.57■□□□□ 0.56
PKP4-205ENST00000426248 LINC00116Q8NCU8 138 aa18.57■□□□□ 0.56
PKP4-205ENST00000426248 GNL3LQ9NVN8 582 aaKnown RBP18.57■□□□□ 0.56
PKP4-205ENST00000426248 FBXO38Q6PIJ6 1188 aa18.57■□□□□ 0.56
PKP4-205ENST00000426248 TMCO3Q6UWJ1 677 aa18.57■□□□□ 0.56
PKP4-205ENST00000426248 ALS2Q96Q42 1657 aa18.57■□□□□ 0.56
PKP4-205ENST00000426248 LMAN1P49257 510 aa18.57■□□□□ 0.56
PKP4-205ENST00000426248 EIF5P55010 431 aaKnown RBP18.57■□□□□ 0.56
PKP4-205ENST00000426248 CNBD1Q8NA66 436 aa18.57■□□□□ 0.56
PKP4-205ENST00000426248 ISCA1Q9BUE6 129 aa18.57■□□□□ 0.56
PKP4-205ENST00000426248 BCL9O00512 1426 aa18.57■□□□□ 0.56
PKP4-205ENST00000426248 ERVV-1B6SEH8 477 aa18.56■□□□□ 0.56
PKP4-205ENST00000426248 BRD1O95696 1058 aa18.56■□□□□ 0.56
PKP4-205ENST00000426248 KAZALD1Q96I82 304 aa18.56■□□□□ 0.56
PKP4-205ENST00000426248 RAI14Q9P0K7 980 aa18.56■□□□□ 0.56
PKP4-205ENST00000426248 CTIFO43310 598 aaKnown RBP18.56■□□□□ 0.56
PKP4-205ENST00000426248 MCM2P49736 904 aa18.56■□□□□ 0.56
PKP4-205ENST00000426248 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.56■□□□□ 0.562e-6■■■□□ 14.6
PKP4-205ENST00000426248 NYXQ9GZU5 481 aa18.56■□□□□ 0.56
PKP4-205ENST00000426248 DEF6Q9H4E7 631 aa18.56■□□□□ 0.56
PKP4-205ENST00000426248 PHLPP1O60346 1717 aa18.56■□□□□ 0.56
PKP4-205ENST00000426248 MSL1Q68DK7 614 aa18.55■□□□□ 0.56
PKP4-205ENST00000426248 JAKMIP1Q96N16 626 aaKnown RBP18.55■□□□□ 0.56
PKP4-205ENST00000426248 DBNLQ9UJU6 430 aaKnown RBP18.55■□□□□ 0.56
PKP4-205ENST00000426248 TNS2Q63HR2 1409 aa18.55■□□□□ 0.56
PKP4-205ENST00000426248 NRDCO43847 1150 aa18.55■□□□□ 0.56
PKP4-205ENST00000426248 RGPD1P0DJD0 1748 aa18.55■□□□□ 0.56
PKP4-205ENST00000426248 UBE2HP62256 183 aa18.55■□□□□ 0.56
PKP4-205ENST00000426248 MTX1Q13505 466 aa18.55■□□□□ 0.56
PKP4-205ENST00000426248 CAVIN4Q5BKX8 364 aa18.55■□□□□ 0.56
PKP4-205ENST00000426248 BICD2Q8TD16 824 aa18.55■□□□□ 0.56
PKP4-205ENST00000426248 XAGE2Q96GT9 111 aa18.55■□□□□ 0.56
PKP4-205ENST00000426248 NMIQ13287 307 aaPredicted RBP18.55■□□□□ 0.56
PKP4-205ENST00000426248 SYT10Q6XYQ8 523 aa18.55■□□□□ 0.56
PKP4-205ENST00000426248 FERMT3Q86UX7 667 aa18.55■□□□□ 0.56
PKP4-205ENST00000426248 TNMDQ9H2S6 317 aa18.55■□□□□ 0.56
PKP4-205ENST00000426248 SNAP23O00161 211 aa18.54■□□□□ 0.56
PKP4-205ENST00000426248 GYS2P54840 703 aa18.54■□□□□ 0.56
PKP4-205ENST00000426248 ERFEQ4G0M1 354 aa18.54■□□□□ 0.56
PKP4-205ENST00000426248 TTLL11Q8NHH1 800 aa18.54■□□□□ 0.56
PKP4-205ENST00000426248 JAG2Q9Y219 1238 aa18.54■□□□□ 0.56
PKP4-205ENST00000426248 FAM227BQ96M60 508 aa18.54■□□□□ 0.56
PKP4-205ENST00000426248 NUP62CLQ9H1M0 184 aa18.54■□□□□ 0.56
PKP4-205ENST00000426248 PAG1Q9NWQ8 432 aa18.54■□□□□ 0.56
PKP4-205ENST00000426248 VIRMAQ69YN4 1812 aaKnown RBP18.54■□□□□ 0.56
PKP4-205ENST00000426248 TRIM66O15016 1216 aa18.54■□□□□ 0.56
PKP4-205ENST00000426248 INTS5Q6P9B9 1019 aaKnown RBP18.54■□□□□ 0.56
PKP4-205ENST00000426248 RPS6KA4O75676 772 aa18.53■□□□□ 0.56
PKP4-205ENST00000426248 MAP3K11Q16584 847 aa18.53■□□□□ 0.56
PKP4-205ENST00000426248 UBXN4Q92575 508 aa18.53■□□□□ 0.56
PKP4-205ENST00000426248 ARHGEF1Q92888 912 aaKnown RBP18.53■□□□□ 0.56
PKP4-205ENST00000426248 CCDC34Q96HJ3 373 aa18.53■□□□□ 0.56
PKP4-205ENST00000426248 COL15A1P39059 1388 aa18.53■□□□□ 0.56
PKP4-205ENST00000426248 ST5P78524 1137 aa18.53■□□□□ 0.56
PKP4-205ENST00000426248 TXLNBQ8N3L3 684 aa18.53■□□□□ 0.56
PKP4-205ENST00000426248 C6orf229H3BNL8 230 aa18.53■□□□□ 0.56
PKP4-205ENST00000426248 SLU7O95391 586 aaKnown RBP18.53■□□□□ 0.56
PKP4-205ENST00000426248 CREBRFQ8IUR6 639 aa18.53■□□□□ 0.56
PKP4-205ENST00000426248 FAM177A1Q8N128 213 aaPredicted RBP18.53■□□□□ 0.56
PKP4-205ENST00000426248 FOXO4P98177 505 aa18.52■□□□□ 0.56
PKP4-205ENST00000426248 ERCC6LQ2NKX8 1250 aa18.52■□□□□ 0.56
PKP4-205ENST00000426248 LEKR1Q6ZMV7 388 aa18.52■□□□□ 0.56
PKP4-205ENST00000426248 ZNF622Q969S3 477 aaKnown RBP eCLIP18.52■□□□□ 0.561e-7■□□□□ 10.3
PKP4-205ENST00000426248 MYCNP04198 464 aaPredicted RBP18.52■□□□□ 0.56
PKP4-205ENST00000426248 CASTP20810 708 aaKnown RBP18.52■□□□□ 0.55
PKP4-205ENST00000426248 ARHGAP29Q52LW3 1261 aa18.52■□□□□ 0.55
PKP4-205ENST00000426248 PHRF1Q9P1Y6 1649 aaKnown RBP18.52■□□□□ 0.55
PKP4-205ENST00000426248 ADORA1P30542 326 aa18.51■□□□□ 0.55
PKP4-205ENST00000426248 TBC1D9BQ66K14 1250 aa18.51■□□□□ 0.55
PKP4-205ENST00000426248 FAM200AQ8TCP9 573 aa18.51■□□□□ 0.55
PKP4-205ENST00000426248 SKILP12757 684 aa18.51■□□□□ 0.55
PKP4-205ENST00000426248 ANO6Q4KMQ2 910 aa18.51■□□□□ 0.55
PKP4-205ENST00000426248 TRDNQ13061 729 aa18.51■□□□□ 0.55
PKP4-205ENST00000426248 CCDC129Q6ZRS4 1044 aa18.51■□□□□ 0.55
PKP4-205ENST00000426248 DNM1Q05193 864 aaKnown RBP18.5■□□□□ 0.55
PKP4-205ENST00000426248 TCEANC2Q96MN5 208 aa18.5■□□□□ 0.55
PKP4-205ENST00000426248 BRD2P25440 801 aaKnown RBP18.5■□□□□ 0.55
PKP4-205ENST00000426248 RALYLQ86SE5 291 aaKnown RBP18.5■□□□□ 0.55
PKP4-205ENST00000426248 ZSCAN26Q16670 478 aa18.5■□□□□ 0.55
PKP4-205ENST00000426248 RRP12Q5JTH9 1297 aaKnown RBP18.5■□□□□ 0.55
PKP4-205ENST00000426248 AIDAQ96BJ3 306 aa18.5■□□□□ 0.55
PKP4-205ENST00000426248 STAP2Q9UGK3 403 aa18.5■□□□□ 0.55
PKP4-205ENST00000426248 CYP46A1Q9Y6A2 500 aa18.5■□□□□ 0.55
PKP4-205ENST00000426248 ZSCAN25Q6NSZ9 544 aa18.49■□□□□ 0.55
PKP4-205ENST00000426248 STK3Q13188 491 aa18.49■□□□□ 0.55
PKP4-205ENST00000426248 TRIM28Q13263 835 aaKnown RBP18.49■□□□□ 0.55
PKP4-205ENST00000426248 TXNRD1Q16881 649 aa18.49■□□□□ 0.55
PKP4-205ENST00000426248 SLC9C2Q5TAH2 1124 aa18.49■□□□□ 0.55
PKP4-205ENST00000426248 ERO1AQ96HE7 468 aa18.49■□□□□ 0.55
PKP4-205ENST00000426248 OSBPL3Q9H4L5 887 aa18.49■□□□□ 0.55
PKP4-205ENST00000426248 HAND2P61296 217 aa18.49■□□□□ 0.55
PKP4-205ENST00000426248 TTLL5Q6EMB2 1281 aa18.49■□□□□ 0.55
PKP4-205ENST00000426248 CAMTA2O94983 1202 aa18.48■□□□□ 0.55
PKP4-205ENST00000426248 LTBP4Q8N2S1 1624 aa18.48■□□□□ 0.55
PKP4-205ENST00000426248 PSMA5P28066 241 aa18.48■□□□□ 0.55
PKP4-205ENST00000426248 MAP3K12Q12852 859 aa18.48■□□□□ 0.55
PKP4-205ENST00000426248 BLOC1S2Q6QNY1 142 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms