RNA–Protein interactions for RNA: ENST00000425835.6

HDAC2-202, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-202ENST00000425835 CCDC9Q9Y3X0 531 aaKnown RBP5.54□□□□□ -1.52
HDAC2-202ENST00000425835 TMEM238LA0A1B0GVL6 79 aa5.53□□□□□ -1.52
HDAC2-202ENST00000425835 H3BRJ5 948 aa5.53□□□□□ -1.52
HDAC2-202ENST00000425835 DEAF1O75398 565 aaPredicted RBP5.53□□□□□ -1.52
HDAC2-202ENST00000425835 XPCQ01831 940 aaPredicted RBP5.53□□□□□ -1.52
HDAC2-202ENST00000425835 IKBKEQ14164 716 aa5.53□□□□□ -1.52
HDAC2-202ENST00000425835 GRIK4Q16099 956 aa5.53□□□□□ -1.52
HDAC2-202ENST00000425835 HGSNATQ68CP4 663 aa5.53□□□□□ -1.52
HDAC2-202ENST00000425835 DTHD1Q6ZMT9 781 aa5.53□□□□□ -1.52
HDAC2-202ENST00000425835 FMR1NBQ8N0W7 255 aaPredicted RBP5.53□□□□□ -1.52
HDAC2-202ENST00000425835 GLIS3Q8NEA6 775 aa5.53□□□□□ -1.52
HDAC2-202ENST00000425835 FOXD4L4Q8WXT5 416 aaPredicted RBP5.53□□□□□ -1.52
HDAC2-202ENST00000425835 PPP4R2Q9NY27 417 aa5.53□□□□□ -1.52
HDAC2-202ENST00000425835 PARP2Q9UGN5 583 aa5.53□□□□□ -1.52
HDAC2-202ENST00000425835 AKAP2Q9Y2D5 859 aa5.53□□□□□ -1.52
HDAC2-202ENST00000425835 FSCN2O14926 492 aa5.52□□□□□ -1.53
HDAC2-202ENST00000425835 PCDH1Q08174 1060 aa5.52□□□□□ -1.53
HDAC2-202ENST00000425835 PSMD2Q13200 908 aa5.52□□□□□ -1.53
HDAC2-202ENST00000425835 SETDB1Q15047 1291 aa5.52□□□□□ -1.53
HDAC2-202ENST00000425835 PRPF40BQ6NWY9 871 aaKnown RBP5.52□□□□□ -1.53
HDAC2-202ENST00000425835 VN1R5Q7Z5H4 357 aa5.52□□□□□ -1.53
HDAC2-202ENST00000425835 OSBPL7Q9BZF2 842 aa5.52□□□□□ -1.53
HDAC2-202ENST00000425835 APBA3O96018 575 aa5.51□□□□□ -1.53
HDAC2-202ENST00000425835 SPATA31C1P0DKV0 1188 aa5.51□□□□□ -1.53
HDAC2-202ENST00000425835 EIF4BP23588 611 aaKnown RBP5.51□□□□□ -1.53
HDAC2-202ENST00000425835 GNA15P30679 374 aa5.51□□□□□ -1.53
HDAC2-202ENST00000425835 ARL4DP49703 201 aa5.51□□□□□ -1.53
HDAC2-202ENST00000425835 ZNF157P51786 506 aaPredicted RBP5.51□□□□□ -1.53
HDAC2-202ENST00000425835 FGD1P98174 961 aa5.51□□□□□ -1.53
HDAC2-202ENST00000425835 GPAT2Q6NUI2 795 aa5.51□□□□□ -1.53
HDAC2-202ENST00000425835 SHISA2Q6UWI4 295 aa5.51□□□□□ -1.53
HDAC2-202ENST00000425835 FBXO11Q86XK2 927 aa5.51□□□□□ -1.53
HDAC2-202ENST00000425835 DTWD1Q8N5C7 304 aa5.51□□□□□ -1.53
HDAC2-202ENST00000425835 GALNT11Q8NCW6 608 aa5.51□□□□□ -1.53
HDAC2-202ENST00000425835 DCAF5Q96JK2 942 aa5.51□□□□□ -1.53
HDAC2-202ENST00000425835 CLEC4MQ9H2X3 399 aaPredicted RBP5.51□□□□□ -1.53
HDAC2-202ENST00000425835 ZNF576Q9H609 170 aa5.51□□□□□ -1.53
HDAC2-202ENST00000425835 C12orf49Q9H741 205 aa5.51□□□□□ -1.53
HDAC2-202ENST00000425835 SEC31BQ9NQW1 1179 aa5.51□□□□□ -1.53
HDAC2-202ENST00000425835 KRBA1A5PL33 1030 aa5.5□□□□□ -1.53
HDAC2-202ENST00000425835 SOX1O00570 391 aaPredicted RBP5.5□□□□□ -1.53
HDAC2-202ENST00000425835 DDX3YO15523 660 aaKnown RBP5.5□□□□□ -1.53
HDAC2-202ENST00000425835 IGHA1P01876 353 aa5.5□□□□□ -1.53
HDAC2-202ENST00000425835 USP17L7P0C7H9 530 aa5.5□□□□□ -1.53
HDAC2-202ENST00000425835 ESRRAP11474 423 aaPredicted RBP5.5□□□□□ -1.53
HDAC2-202ENST00000425835 ELNP15502 786 aa5.5□□□□□ -1.53
HDAC2-202ENST00000425835 NLRP12P59046 1061 aa5.5□□□□□ -1.53
HDAC2-202ENST00000425835 PIP4K2BP78356 416 aa5.5□□□□□ -1.53
HDAC2-202ENST00000425835 GSTM4Q03013 218 aa5.5□□□□□ -1.53
HDAC2-202ENST00000425835 ZNF326Q5BKZ1 582 aaKnown RBP5.5□□□□□ -1.53
HDAC2-202ENST00000425835 KLHDC7BQ96G42 594 aa5.5□□□□□ -1.53
HDAC2-202ENST00000425835 MRS2Q9HD23 443 aa5.5□□□□□ -1.53
HDAC2-202ENST00000425835 GPN3Q9UHW5 284 aaPredicted RBP5.5□□□□□ -1.53
HDAC2-202ENST00000425835 USP21Q9UK80 565 aa5.5□□□□□ -1.53
HDAC2-202ENST00000425835 FBXO24O75426 580 aa5.49□□□□□ -1.53
HDAC2-202ENST00000425835 ITPKAP23677 461 aa5.49□□□□□ -1.53
HDAC2-202ENST00000425835 GSTT1P30711 240 aa5.49□□□□□ -1.53
HDAC2-202ENST00000425835 CD68P34810 354 aaPredicted RBP5.49□□□□□ -1.53
HDAC2-202ENST00000425835 C19orf57Q0VDD7 668 aa5.49□□□□□ -1.53
HDAC2-202ENST00000425835 ZNF423Q2M1K9 1284 aa5.49□□□□□ -1.53
HDAC2-202ENST00000425835 TPTE2Q6XPS3 522 aa5.49□□□□□ -1.53
HDAC2-202ENST00000425835 ILDR2Q71H61 639 aa5.49□□□□□ -1.53
HDAC2-202ENST00000425835 MAP4K3Q8IVH8 894 aa5.49□□□□□ -1.53
HDAC2-202ENST00000425835 USP26Q9BXU7 913 aa5.49□□□□□ -1.53
HDAC2-202ENST00000425835 KCNK4Q9NYG8 393 aa5.49□□□□□ -1.53
HDAC2-202ENST00000425835 FAM8A1Q9UBU6 413 aa5.49□□□□□ -1.53
HDAC2-202ENST00000425835 VTI1BQ9UEU0 232 aa5.49□□□□□ -1.53
HDAC2-202ENST00000425835 DLL1O00548 723 aa5.48□□□□□ -1.53
HDAC2-202ENST00000425835 GIPC1O14908 333 aa5.48□□□□□ -1.53
HDAC2-202ENST00000425835 ZNF16P17020 682 aaPredicted RBP5.48□□□□□ -1.53
HDAC2-202ENST00000425835 DAB2P98082 770 aa5.48□□□□□ -1.53
HDAC2-202ENST00000425835 FAAP100Q0VG06 881 aa5.48□□□□□ -1.53
HDAC2-202ENST00000425835 FOXD4L6Q3SYB3 417 aaPredicted RBP5.48□□□□□ -1.53
HDAC2-202ENST00000425835 FOXD4L3Q6VB84 417 aaPredicted RBP5.48□□□□□ -1.53
HDAC2-202ENST00000425835 KLHL23Q8NBE8 558 aa5.48□□□□□ -1.53
HDAC2-202ENST00000425835 RGS22Q8NE09 1264 aa5.48□□□□□ -1.53
HDAC2-202ENST00000425835 UBASH3BQ8TF42 649 aa5.48□□□□□ -1.53
HDAC2-202ENST00000425835 FRMD6Q96NE9 622 aa5.48□□□□□ -1.53
HDAC2-202ENST00000425835 NACC1Q96RE7 527 aa5.48□□□□□ -1.53
HDAC2-202ENST00000425835 SRCIN1Q9C0H9 1055 aa5.48□□□□□ -1.53
HDAC2-202ENST00000425835 SRA1Q9HD15 236 aaKnown RBP5.48□□□□□ -1.53
HDAC2-202ENST00000425835 OSGEPQ9NPF4 335 aa5.48□□□□□ -1.53
HDAC2-202ENST00000425835 TTF2Q9UNY4 1162 aaKnown RBP5.48□□□□□ -1.53
HDAC2-202ENST00000425835 AK5Q9Y6K8 562 aa5.48□□□□□ -1.53
HDAC2-202ENST00000425835 ADAM11O75078 769 aa5.47□□□□□ -1.53
HDAC2-202ENST00000425835 WISP1O95388 367 aa5.47□□□□□ -1.53
HDAC2-202ENST00000425835 XRCC5P13010 732 aaKnown RBP5.47□□□□□ -1.53
HDAC2-202ENST00000425835 SELPP16109 830 aa5.47□□□□□ -1.53
HDAC2-202ENST00000425835 CHRNA4P43681 627 aa5.47□□□□□ -1.53
HDAC2-202ENST00000425835 PTPN12Q05209 780 aaKnown RBP5.47□□□□□ -1.53
HDAC2-202ENST00000425835 DUOXA2Q1HG44 320 aa5.47□□□□□ -1.53
HDAC2-202ENST00000425835 ACAD11Q709F0 780 aa5.47□□□□□ -1.53
HDAC2-202ENST00000425835 TMC4Q7Z404 712 aa5.47□□□□□ -1.53
HDAC2-202ENST00000425835 ALYREFQ86V81 257 aaKnown RBP5.47□□□□□ -1.53
HDAC2-202ENST00000425835 AGGF1Q8N302 714 aaeCLIP5.47□□□□□ -1.53
HDAC2-202ENST00000425835 C3orf58Q8NDZ4 430 aa5.47□□□□□ -1.53
HDAC2-202ENST00000425835 DCAF11Q8TEB1 546 aa5.47□□□□□ -1.53
HDAC2-202ENST00000425835 WNT8BQ93098 351 aa5.47□□□□□ -1.53
HDAC2-202ENST00000425835 C1QTNF9BB2RNN3 333 aa5.46□□□□□ -1.54
HDAC2-202ENST00000425835 SORBS3O60504 671 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms