RNA–Protein interactions for RNA: ENST00000424408.6

LAMA4-207, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LAMA4, Length 5,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-207ENST00000424408 PIK3R4Q99570 1358 aa13.62□□□□□ -0.23
LAMA4-207ENST00000424408 MCMDC2Q4G0Z9 681 aa13.62□□□□□ -0.23
LAMA4-207ENST00000424408 PAXIP1Q6ZW49 1069 aaPredicted RBP13.62□□□□□ -0.23
LAMA4-207ENST00000424408 TRIM75PA6NK02 468 aa13.62□□□□□ -0.23
LAMA4-207ENST00000424408 MCM7P33993 719 aa13.62□□□□□ -0.23
LAMA4-207ENST00000424408 MYL5Q02045 173 aa13.62□□□□□ -0.23
LAMA4-207ENST00000424408 JARID2Q92833 1246 aaPredicted RBP13.62□□□□□ -0.23
LAMA4-207ENST00000424408 FAM169AQ9Y6X4 670 aa13.62□□□□□ -0.23
LAMA4-207ENST00000424408 RNASE9P60153 205 aaKnown RBP13.62□□□□□ -0.23
LAMA4-207ENST00000424408 NME9Q86XW9 330 aa13.62□□□□□ -0.23
LAMA4-207ENST00000424408 MCUR1Q96AQ8 359 aa13.62□□□□□ -0.23
LAMA4-207ENST00000424408 FAM184BQ9ULE4 1060 aa13.62□□□□□ -0.23
LAMA4-207ENST00000424408 ODF2LQ9ULJ1 636 aa13.62□□□□□ -0.23
LAMA4-207ENST00000424408 GOLGA6BA6NDN3 693 aa13.61□□□□□ -0.23
LAMA4-207ENST00000424408 NUTM2BA6NNL0 878 aaPredicted RBP13.61□□□□□ -0.23
LAMA4-207ENST00000424408 NUTM2EB1AL46 878 aaPredicted RBP13.61□□□□□ -0.23
LAMA4-207ENST00000424408 KRT2P35908 639 aa13.61□□□□□ -0.23
LAMA4-207ENST00000424408 AEBP2Q6ZN18 517 aaPredicted RBP13.61□□□□□ -0.23
LAMA4-207ENST00000424408 NUTM2AQ8IVF1 878 aaPredicted RBP13.61□□□□□ -0.23
LAMA4-207ENST00000424408 PRDM11Q9NQV5 511 aa13.61□□□□□ -0.23
LAMA4-207ENST00000424408 ERCC5P28715 1186 aaPredicted RBP13.61□□□□□ -0.23
LAMA4-207ENST00000424408 APOBRQ0VD83 1088 aa13.61□□□□□ -0.23
LAMA4-207ENST00000424408 TUBB2AQ13885 445 aa13.61□□□□□ -0.23
LAMA4-207ENST00000424408 TUBB2BQ9BVA1 445 aa13.61□□□□□ -0.23
LAMA4-207ENST00000424408 GMNNO75496 209 aa13.61□□□□□ -0.23
LAMA4-207ENST00000424408 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.61□□□□□ -0.23
LAMA4-207ENST00000424408 ZBTB3Q9H5J0 574 aa13.61□□□□□ -0.23
LAMA4-207ENST00000424408 ATP5J2-PTCD1G3V325 749 aa13.61□□□□□ -0.23
LAMA4-207ENST00000424408 VPS52Q8N1B4 723 aa13.61□□□□□ -0.23
LAMA4-207ENST00000424408 UTP11Q9Y3A2 253 aaKnown RBP13.61□□□□□ -0.23
LAMA4-207ENST00000424408 TSPY3P0CV98 308 aa13.61□□□□□ -0.23
LAMA4-207ENST00000424408 TSPY8P0CW00 308 aa13.61□□□□□ -0.23
LAMA4-207ENST00000424408 GPTP24298 496 aa13.61□□□□□ -0.23
LAMA4-207ENST00000424408 RAPGEF1Q13905 1077 aa13.61□□□□□ -0.23
LAMA4-207ENST00000424408 WDR78Q5VTH9 848 aa13.61□□□□□ -0.23
LAMA4-207ENST00000424408 IGSF22Q8N9C0 903 aa13.61□□□□□ -0.23
LAMA4-207ENST00000424408 CNNM2Q9H8M5 875 aa13.61□□□□□ -0.23
LAMA4-207ENST00000424408 E7EVH7 732 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 HSPA1LP34931 641 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 SF3A3Q12874 501 aaKnown RBP eCLIP13.6□□□□□ -0.23
LAMA4-207ENST00000424408 CCDC38Q502W7 563 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 CYP26C1Q6V0L0 522 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 IFT20Q8IY31 132 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 MEIS3Q99687 375 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 RBM28Q9NW13 759 aaKnown RBP13.6□□□□□ -0.23
LAMA4-207ENST00000424408 SLC4A4Q9Y6R1 1079 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 TTC36A6NLP5 189 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 ZPR1O75312 459 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 LDHAL6AQ6ZMR3 332 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 DPH6Q7L8W6 267 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 CCDC170Q8IYT3 715 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 KIAA1524Q8TCG1 905 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 PHF23Q9BUL5 403 aaPredicted RBP13.6□□□□□ -0.23
LAMA4-207ENST00000424408 TTF2Q9UNY4 1162 aaKnown RBP13.6□□□□□ -0.23
LAMA4-207ENST00000424408 A0A1B0GVL5 298 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 PTPDC1A2A3K4 754 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 FAM83GA6ND36 823 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 A6NNZ2 444 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 TXNDC9O14530 226 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 TUBB8Q3ZCM7 444 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 AMOTQ4VCS5 1084 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 CHST3Q7LGC8 479 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 TMTC2Q8N394 836 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 GPR161Q8N6U8 529 aaKnown RBP13.6□□□□□ -0.23
LAMA4-207ENST00000424408 CABS1Q96KC9 395 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 PLIN2Q99541 437 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 RABGAP1Q9Y3P9 1069 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 GCKP35557 465 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 ZNF75DP51815 510 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 CRNKL1Q9BZJ0 848 aaKnown RBP13.6□□□□□ -0.23
LAMA4-207ENST00000424408 NAPAP54920 295 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 VSIG1Q86XK7 387 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 RNF10Q8N5U6 811 aaKnown RBP13.6□□□□□ -0.23
LAMA4-207ENST00000424408 EPSTI1Q96J88 318 aa13.6□□□□□ -0.23
LAMA4-207ENST00000424408 NPHP3Q7Z494 1330 aa13.59□□□□□ -0.23
LAMA4-207ENST00000424408 PI4KAP2A4QPH2 592 aa13.59□□□□□ -0.23
LAMA4-207ENST00000424408 PI4KAP1Q8N8J0 262 aa13.59□□□□□ -0.23
LAMA4-207ENST00000424408 RUFY3Q7L099 469 aa13.59□□□□□ -0.23
LAMA4-207ENST00000424408 ELP1O95163 1332 aa13.59□□□□□ -0.23
LAMA4-207ENST00000424408 UBE3BQ7Z3V4 1068 aa13.59□□□□□ -0.23
LAMA4-207ENST00000424408 KCNH5Q8NCM2 988 aa13.59□□□□□ -0.23
LAMA4-207ENST00000424408 DDX27Q96GQ7 796 aaKnown RBP13.59□□□□□ -0.23
LAMA4-207ENST00000424408 BAIAP2L1Q9UHR4 511 aa13.59□□□□□ -0.23
LAMA4-207ENST00000424408 STX8Q9UNK0 236 aa13.59□□□□□ -0.23
LAMA4-207ENST00000424408 BAG3O95817 575 aa13.59□□□□□ -0.23
LAMA4-207ENST00000424408 FMNL3Q8IVF7 1028 aa13.59□□□□□ -0.23
LAMA4-207ENST00000424408 ESR2Q92731 530 aa13.59□□□□□ -0.23
LAMA4-207ENST00000424408 DDX21Q9NR30 783 aaKnown RBP eCLIP13.59□□□□□ -0.23
LAMA4-207ENST00000424408 CLUL1Q15846 466 aa13.58□□□□□ -0.23
LAMA4-207ENST00000424408 ZSCAN26Q16670 478 aa13.58□□□□□ -0.23
LAMA4-207ENST00000424408 CCDC62Q6P9F0 684 aa13.58□□□□□ -0.23
LAMA4-207ENST00000424408 SBNO2Q9Y2G9 1366 aa13.58□□□□□ -0.23
LAMA4-207ENST00000424408 SEC24BO95487 1268 aa13.58□□□□□ -0.24
LAMA4-207ENST00000424408 CALM1P0DP23 149 aa13.58□□□□□ -0.24
LAMA4-207ENST00000424408 CALM2P0DP24 149 aa13.58□□□□□ -0.24
LAMA4-207ENST00000424408 CALM3P0DP25 149 aa13.58□□□□□ -0.24
LAMA4-207ENST00000424408 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.58□□□□□ -0.24
LAMA4-207ENST00000424408 TIAM1Q13009 1591 aa13.58□□□□□ -0.24
LAMA4-207ENST00000424408 NCOA1Q15788 1441 aa13.58□□□□□ -0.24
LAMA4-207ENST00000424408 PSMD6Q15008 389 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms