RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 USP16Q9Y5T5 823 aa10.69□□□□□ -0.7
CLCN3P1-201ENST00000423965 VCANP13611 3396 aa10.68□□□□□ -0.7
CLCN3P1-201ENST00000423965 ABCC12Q96J65 1359 aa10.68□□□□□ -0.7
CLCN3P1-201ENST00000423965 UBE2Q2LH0YL09 131 aa10.68□□□□□ -0.7
CLCN3P1-201ENST00000423965 PSMD14O00487 310 aa10.68□□□□□ -0.7
CLCN3P1-201ENST00000423965 GPR37O15354 613 aa10.68□□□□□ -0.7
CLCN3P1-201ENST00000423965 FECHP22830 423 aa10.68□□□□□ -0.7
CLCN3P1-201ENST00000423965 IL13P35225 146 aa10.68□□□□□ -0.7
CLCN3P1-201ENST00000423965 TEFQ10587 303 aa10.68□□□□□ -0.7
CLCN3P1-201ENST00000423965 KIF4BQ2VIQ3 1234 aa10.68□□□□□ -0.7
CLCN3P1-201ENST00000423965 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.68□□□□□ -0.7
CLCN3P1-201ENST00000423965 NECTIN2Q92692 538 aa10.68□□□□□ -0.7
CLCN3P1-201ENST00000423965 NR2E3Q9Y5X4 410 aa10.68□□□□□ -0.7
CLCN3P1-201ENST00000423965 ADGRG1Q9Y653 693 aa10.68□□□□□ -0.7
CLCN3P1-201ENST00000423965 SOX1O00570 391 aaPredicted RBP10.67□□□□□ -0.7
CLCN3P1-201ENST00000423965 HLFQ16534 295 aa10.67□□□□□ -0.7
CLCN3P1-201ENST00000423965 MTHFSDQ2M296 383 aaKnown RBP10.67□□□□□ -0.7
CLCN3P1-201ENST00000423965 SLC51AQ86UW1 340 aa10.67□□□□□ -0.7
CLCN3P1-201ENST00000423965 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.67□□□□□ -0.7
CLCN3P1-201ENST00000423965 TCIRG1Q13488 830 aa10.66□□□□□ -0.7
CLCN3P1-201ENST00000423965 ARHGEF6Q15052 776 aa10.66□□□□□ -0.7
CLCN3P1-201ENST00000423965 MOB2Q70IA6 237 aa10.66□□□□□ -0.7
CLCN3P1-201ENST00000423965 NLRP3Q96P20 1036 aa10.66□□□□□ -0.7
CLCN3P1-201ENST00000423965 IBTKQ9P2D0 1353 aaPredicted RBP10.65□□□□□ -0.7
CLCN3P1-201ENST00000423965 ERBB4Q15303 1308 aa10.65□□□□□ -0.7
CLCN3P1-201ENST00000423965 MANSC4A6NHS7 340 aaPredicted RBP10.65□□□□□ -0.7
CLCN3P1-201ENST00000423965 ERVV-1B6SEH8 477 aa10.65□□□□□ -0.7
CLCN3P1-201ENST00000423965 PIP4K2AP48426 406 aaPredicted RBP10.65□□□□□ -0.7
CLCN3P1-201ENST00000423965 SCARF1Q14162 830 aa10.65□□□□□ -0.7
CLCN3P1-201ENST00000423965 SLC9C1Q4G0N8 1177 aa10.65□□□□□ -0.7
CLCN3P1-201ENST00000423965 SWT1Q5T5J6 900 aaKnown RBP10.65□□□□□ -0.7
CLCN3P1-201ENST00000423965 ANGEL2Q5VTE6 544 aaKnown RBP10.65□□□□□ -0.7
CLCN3P1-201ENST00000423965 DEFB123Q8N688 67 aa10.65□□□□□ -0.7
CLCN3P1-201ENST00000423965 CD99L2Q8TCZ2 262 aa10.65□□□□□ -0.7
CLCN3P1-201ENST00000423965 HTATIP2Q9BUP3 242 aa10.65□□□□□ -0.7
CLCN3P1-201ENST00000423965 TSR3Q9UJK0 312 aaKnown RBP10.65□□□□□ -0.7
CLCN3P1-201ENST00000423965 TTC28Q96AY4 2481 aa10.64□□□□□ -0.71
CLCN3P1-201ENST00000423965 WTIPA6NIX2 430 aaPredicted RBP10.64□□□□□ -0.71
CLCN3P1-201ENST00000423965 OATP04181 439 aa10.64□□□□□ -0.71
CLCN3P1-201ENST00000423965 SNRPA1P09661 255 aaKnown RBP10.64□□□□□ -0.71
CLCN3P1-201ENST00000423965 PPP4CP60510 307 aa10.64□□□□□ -0.71
CLCN3P1-201ENST00000423965 SP3Q02447 781 aa10.64□□□□□ -0.71
CLCN3P1-201ENST00000423965 SPRYD7Q5W111 196 aa10.64□□□□□ -0.71
CLCN3P1-201ENST00000423965 IL17REQ8NFR9 667 aa10.64□□□□□ -0.71
CLCN3P1-201ENST00000423965 SPTBN5Q9NRC6 3674 aaKnown RBP10.64□□□□□ -0.71
CLCN3P1-201ENST00000423965 ASTN2O75129 1339 aaPredicted RBP10.63□□□□□ -0.71
CLCN3P1-201ENST00000423965 ZBTB7BO15156 539 aaPredicted RBP10.63□□□□□ -0.71
CLCN3P1-201ENST00000423965 VIL1P09327 827 aaKnown RBP10.63□□□□□ -0.71
CLCN3P1-201ENST00000423965 DNAJB2P25686 324 aa10.63□□□□□ -0.71
CLCN3P1-201ENST00000423965 NF2P35240 595 aa10.63□□□□□ -0.71
CLCN3P1-201ENST00000423965 SLC4A3P48751 1232 aa10.63□□□□□ -0.71
CLCN3P1-201ENST00000423965 ZNF280AP59817 542 aaPredicted RBP10.63□□□□□ -0.71
CLCN3P1-201ENST00000423965 TTLL12Q14166 644 aaPredicted RBP10.63□□□□□ -0.71
CLCN3P1-201ENST00000423965 WASHC4Q2M389 1173 aa10.63□□□□□ -0.71
CLCN3P1-201ENST00000423965 SLC10A5Q5PT55 438 aa10.63□□□□□ -0.71
CLCN3P1-201ENST00000423965 OTUD7BQ6GQQ9 843 aa10.63□□□□□ -0.71
CLCN3P1-201ENST00000423965 NBPF10Q6P3W6 841 aaKnown RBP10.63□□□□□ -0.71
CLCN3P1-201ENST00000423965 MTMR10Q9NXD2 777 aa10.63□□□□□ -0.71
CLCN3P1-201ENST00000423965 ZNF609O15014 1411 aa10.63□□□□□ -0.71
CLCN3P1-201ENST00000423965 ABCC4O15439 1325 aa10.62□□□□□ -0.71
CLCN3P1-201ENST00000423965 RCCD1A6NED2 376 aa10.62□□□□□ -0.71
CLCN3P1-201ENST00000423965 BTBD11A6QL63 1104 aa10.62□□□□□ -0.71
CLCN3P1-201ENST00000423965 SUSD4Q5VX71 490 aa10.62□□□□□ -0.71
CLCN3P1-201ENST00000423965 TMC4Q7Z404 712 aa10.62□□□□□ -0.71
CLCN3P1-201ENST00000423965 NKX2-3Q8TAU0 364 aa10.62□□□□□ -0.71
CLCN3P1-201ENST00000423965 GNAT3A8MTJ3 354 aa10.61□□□□□ -0.71
CLCN3P1-201ENST00000423965 PTPN12Q05209 780 aaKnown RBP10.61□□□□□ -0.71
CLCN3P1-201ENST00000423965 LDLRAD1Q5T700 205 aa10.61□□□□□ -0.71
CLCN3P1-201ENST00000423965 ARMC9Q7Z3E5 817 aa10.61□□□□□ -0.71
CLCN3P1-201ENST00000423965 PPP1R42Q7Z4L9 355 aa10.61□□□□□ -0.71
CLCN3P1-201ENST00000423965 PXYLP1Q8TE99 480 aa10.61□□□□□ -0.71
CLCN3P1-201ENST00000423965 DBNDD1Q9H9R9 158 aa10.61□□□□□ -0.71
CLCN3P1-201ENST00000423965 KCNQ3O43525 872 aa10.6□□□□□ -0.71
CLCN3P1-201ENST00000423965 HMOX1P09601 288 aa10.6□□□□□ -0.71
CLCN3P1-201ENST00000423965 ZBTB48P10074 688 aaPredicted RBP10.6□□□□□ -0.71
CLCN3P1-201ENST00000423965 UBE2Q1Q7Z7E8 422 aa10.6□□□□□ -0.71
CLCN3P1-201ENST00000423965 SLF2Q8IX21 1173 aa10.6□□□□□ -0.71
CLCN3P1-201ENST00000423965 AGBL3Q8NEM8 1001 aa10.6□□□□□ -0.71
CLCN3P1-201ENST00000423965 PLA2G2EQ9NZK7 142 aa10.6□□□□□ -0.71
CLCN3P1-201ENST00000423965 PTCH2Q9Y6C5 1203 aa10.6□□□□□ -0.71
CLCN3P1-201ENST00000423965 MAP3K15Q6ZN16 1313 aa10.59□□□□□ -0.71
CLCN3P1-201ENST00000423965 IGF2BP3O00425 579 aaKnown RBP eCLIP10.59□□□□□ -0.71
CLCN3P1-201ENST00000423965 NTSR2O95665 410 aa10.59□□□□□ -0.71
CLCN3P1-201ENST00000423965 BMP8BP34820 402 aa10.59□□□□□ -0.71
CLCN3P1-201ENST00000423965 PLA2G5P39877 138 aa10.59□□□□□ -0.71
CLCN3P1-201ENST00000423965 CRHR2Q13324 411 aa10.59□□□□□ -0.71
CLCN3P1-201ENST00000423965 LRIT3Q3SXY7 679 aa10.59□□□□□ -0.71
CLCN3P1-201ENST00000423965 NYAP1Q6ZVC0 841 aa10.59□□□□□ -0.71
CLCN3P1-201ENST00000423965 METTL3Q86U44 580 aaKnown RBP10.59□□□□□ -0.71
CLCN3P1-201ENST00000423965 ZNF34Q8IZ26 560 aa10.59□□□□□ -0.71
CLCN3P1-201ENST00000423965 SLC10A4Q96EP9 437 aa10.59□□□□□ -0.71
CLCN3P1-201ENST00000423965 KCNQ5Q9NR82 932 aa10.59□□□□□ -0.71
CLCN3P1-201ENST00000423965 RTL9Q8NET4 1388 aa10.59□□□□□ -0.71
CLCN3P1-201ENST00000423965 UBN2Q6ZU65 1347 aa10.58□□□□□ -0.71
CLCN3P1-201ENST00000423965 KDM3BQ7LBC6 1761 aa10.58□□□□□ -0.72
CLCN3P1-201ENST00000423965 UNCXA6NJT0 531 aa10.58□□□□□ -0.72
CLCN3P1-201ENST00000423965 ECE2O60344 883 aa10.58□□□□□ -0.72
CLCN3P1-201ENST00000423965 GPTP24298 496 aa10.58□□□□□ -0.72
CLCN3P1-201ENST00000423965 GRAPQ13588 217 aa10.58□□□□□ -0.72
CLCN3P1-201ENST00000423965 PARP10Q53GL7 1025 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms