RNA–Protein interactions for RNA: ENST00000422441.5

ITGA9-203, Transcript of integrin subunit alpha 9, humanhuman

TSL 1 (best) BASIC

Gene ITGA9, Length 2,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-203ENST00000422441 CARMIL3Q8ND23 1372 aa30.27■■■□□ 2.44
ITGA9-203ENST00000422441 MYH3P11055 1940 aa30.26■■■□□ 2.44
ITGA9-203ENST00000422441 ATL3Q6DD88 541 aa30.26■■■□□ 2.44
ITGA9-203ENST00000422441 PIBF1Q8WXW3 757 aa30.26■■■□□ 2.44
ITGA9-203ENST00000422441 CBX8Q9HC52 389 aa30.26■■■□□ 2.44
ITGA9-203ENST00000422441 TRMT112Q9UI30 125 aaKnown RBP30.26■■■□□ 2.44
ITGA9-203ENST00000422441 PRC1O43663 620 aa30.26■■■□□ 2.43
ITGA9-203ENST00000422441 USP28Q96RU2 1077 aa30.26■■■□□ 2.43
ITGA9-203ENST00000422441 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.26■■■□□ 2.43
ITGA9-203ENST00000422441 KAT6BQ8WYB5 2073 aa30.25■■■□□ 2.43
ITGA9-203ENST00000422441 GUCY1B3Q02153 619 aa30.25■■■□□ 2.43
ITGA9-203ENST00000422441 ILDR1Q86SU0 546 aaPredicted RBP30.25■■■□□ 2.43
ITGA9-203ENST00000422441 ZNF396Q96N95 335 aaPredicted RBP30.25■■■□□ 2.43
ITGA9-203ENST00000422441 ADD2P35612 726 aa30.24■■■□□ 2.43
ITGA9-203ENST00000422441 SASS6Q6UVJ0 657 aa30.24■■■□□ 2.43
ITGA9-203ENST00000422441 NUP98P52948 1817 aa30.24■■■□□ 2.43
ITGA9-203ENST00000422441 PDE8AO60658 829 aa30.24■■■□□ 2.43
ITGA9-203ENST00000422441 ANTXR2P58335 489 aa30.24■■■□□ 2.43
ITGA9-203ENST00000422441 NCOA7Q8NI08 942 aa30.24■■■□□ 2.43
ITGA9-203ENST00000422441 ZNF213O14771 459 aa30.23■■■□□ 2.43
ITGA9-203ENST00000422441 PDE8BO95263 885 aa30.23■■■□□ 2.43
ITGA9-203ENST00000422441 ZSCAN25Q6NSZ9 544 aa30.23■■■□□ 2.43
ITGA9-203ENST00000422441 ERVV-1B6SEH8 477 aa30.22■■■□□ 2.43
ITGA9-203ENST00000422441 CCAR1Q8IX12 1150 aaKnown RBP30.22■■■□□ 2.43
ITGA9-203ENST00000422441 HPS5Q9UPZ3 1129 aa30.22■■■□□ 2.43
ITGA9-203ENST00000422441 TBC1D2BQ9UPU7 963 aa30.22■■■□□ 2.43
ITGA9-203ENST00000422441 EXOC5O00471 708 aa30.21■■■□□ 2.43
ITGA9-203ENST00000422441 NOLC1Q14978 699 aaKnown RBP eCLIP30.21■■■□□ 2.43
ITGA9-203ENST00000422441 SLC9C2Q5TAH2 1124 aa30.21■■■□□ 2.43
ITGA9-203ENST00000422441 SYTL4Q96C24 671 aaPredicted RBP30.21■■■□□ 2.43
ITGA9-203ENST00000422441 PIH1D3Q9NQM4 214 aaKnown RBP30.21■■■□□ 2.43
ITGA9-203ENST00000422441 COL14A1Q05707 1796 aaKnown RBP30.21■■■□□ 2.43
ITGA9-203ENST00000422441 KLF18A0A0U1RQI7 1052 aa30.21■■■□□ 2.43
ITGA9-203ENST00000422441 TTF1Q15361 905 aaPredicted RBP30.21■■■□□ 2.43
ITGA9-203ENST00000422441 DZIP3Q86Y13 1208 aaKnown RBP30.21■■■□□ 2.43
ITGA9-203ENST00000422441 IL6STP40189 918 aaPredicted RBP30.2■■■□□ 2.43
ITGA9-203ENST00000422441 GOLPH3LQ9H4A5 285 aa30.2■■■□□ 2.43
ITGA9-203ENST00000422441 UBN2Q6ZU65 1347 aa30.2■■■□□ 2.43
ITGA9-203ENST00000422441 DDX60Q8IY21 1712 aaKnown RBP30.2■■■□□ 2.42
ITGA9-203ENST00000422441 RALYLQ86SE5 291 aaKnown RBP30.2■■■□□ 2.42
ITGA9-203ENST00000422441 WDR19Q8NEZ3 1342 aa30.19■■■□□ 2.42
ITGA9-203ENST00000422441 ATRNO75882 1429 aa30.19■■■□□ 2.42
ITGA9-203ENST00000422441 TPM3P06753 285 aa30.19■■■□□ 2.42
ITGA9-203ENST00000422441 ZNF34Q8IZ26 560 aa30.19■■■□□ 2.42
ITGA9-203ENST00000422441 SPC24Q8NBT2 197 aa30.19■■■□□ 2.42
ITGA9-203ENST00000422441 TDRD7Q8NHU6 1098 aaKnown RBP30.19■■■□□ 2.42
ITGA9-203ENST00000422441 NBPF3Q9H094 633 aa30.19■■■□□ 2.42
ITGA9-203ENST00000422441 DHX16O60231 1041 aaKnown RBP30.19■■■□□ 2.42
ITGA9-203ENST00000422441 CCDC102BQ68D86 513 aa30.19■■■□□ 2.42
ITGA9-203ENST00000422441 DNAJC25Q9H1X3 360 aa30.19■■■□□ 2.42
ITGA9-203ENST00000422441 GOLGA8BA8MQT2 603 aa30.18■■■□□ 2.42
ITGA9-203ENST00000422441 PHKA1P46020 1223 aa30.18■■■□□ 2.42
ITGA9-203ENST00000422441 SNW1Q13573 536 aaKnown RBP30.18■■■□□ 2.42
ITGA9-203ENST00000422441 UBE3CQ15386 1083 aa30.18■■■□□ 2.42
ITGA9-203ENST00000422441 KCNF1Q9H3M0 494 aa30.18■■■□□ 2.42
ITGA9-203ENST00000422441 KDM4FA0A1W2PPD8 638 aa30.17■■■□□ 2.42
ITGA9-203ENST00000422441 ARID4AP29374 1257 aaPredicted RBP30.17■■■□□ 2.42
ITGA9-203ENST00000422441 ZNF165P49910 485 aa30.17■■■□□ 2.42
ITGA9-203ENST00000422441 C17orf53Q8N3J3 647 aaPredicted RBP30.17■■■□□ 2.42
ITGA9-203ENST00000422441 SPTLC3Q9NUV7 552 aa30.17■■■□□ 2.42
ITGA9-203ENST00000422441 MYO5AQ9Y4I1 1855 aaKnown RBP30.17■■■□□ 2.42
ITGA9-203ENST00000422441 GOLGA6L6A8MZA4 724 aa30.16■■■□□ 2.42
ITGA9-203ENST00000422441 CTAGE5O15320 804 aa30.16■■■□□ 2.42
ITGA9-203ENST00000422441 OTUD7BQ6GQQ9 843 aa30.16■■■□□ 2.42
ITGA9-203ENST00000422441 ENGASEQ8NFI3 743 aa30.16■■■□□ 2.42
ITGA9-203ENST00000422441 IDH1O75874 414 aaKnown RBP30.16■■■□□ 2.42
ITGA9-203ENST00000422441 PLCH1Q4KWH8 1693 aa30.16■■■□□ 2.42
ITGA9-203ENST00000422441 CAVIN2O95810 425 aa30.15■■■□□ 2.42
ITGA9-203ENST00000422441 CCDC73Q6ZRK6 1079 aa30.15■■■□□ 2.42
ITGA9-203ENST00000422441 C8orf76Q96K31 380 aa30.15■■■□□ 2.42
ITGA9-203ENST00000422441 RTEL1Q9NZ71 1219 aa30.15■■■□□ 2.42
ITGA9-203ENST00000422441 ORC3Q9UBD5 711 aaPredicted RBP30.15■■■□□ 2.42
ITGA9-203ENST00000422441 ZNF532Q9HCE3 1301 aa30.15■■■□□ 2.42
ITGA9-203ENST00000422441 UQCRHLA0A096LP55 91 aa30.15■■■□□ 2.42
ITGA9-203ENST00000422441 UQCRHP07919 91 aa30.15■■■□□ 2.42
ITGA9-203ENST00000422441 UQCRFS1P1P0C7P4 283 aa30.15■■■□□ 2.42
ITGA9-203ENST00000422441 FGFR2P21802 821 aa30.15■■■□□ 2.42
ITGA9-203ENST00000422441 RAB11FIP4Q86YS3 637 aa30.15■■■□□ 2.42
ITGA9-203ENST00000422441 RRP9O43818 475 aaKnown RBP30.14■■■□□ 2.42
ITGA9-203ENST00000422441 ME1P48163 572 aa30.14■■■□□ 2.42
ITGA9-203ENST00000422441 PUM3Q15397 648 aaKnown RBP30.14■■■□□ 2.42
ITGA9-203ENST00000422441 FBXO18Q8NFZ0 1043 aa30.14■■■□□ 2.42
ITGA9-203ENST00000422441 LPIN2Q92539 896 aa30.14■■■□□ 2.42
ITGA9-203ENST00000422441 SLIT2O94813 1529 aa30.14■■■□□ 2.42
ITGA9-203ENST00000422441 PDE6AP16499 860 aa30.13■■■□□ 2.41
ITGA9-203ENST00000422441 FAM160A1Q05DH4 1040 aa30.13■■■□□ 2.41
ITGA9-203ENST00000422441 TBC1D10CQ8IV04 446 aa30.13■■■□□ 2.41
ITGA9-203ENST00000422441 DENND2AQ9ULE3 1009 aa30.13■■■□□ 2.41
ITGA9-203ENST00000422441 MROH5Q6ZUA9 1318 aa30.13■■■□□ 2.41
ITGA9-203ENST00000422441 TCRBV5S4A2TA0A5A2 114 aa30.13■■■□□ 2.41
ITGA9-203ENST00000422441 HELBQ8NG08 1087 aaPredicted RBP30.13■■■□□ 2.41
ITGA9-203ENST00000422441 NKX2-3Q8TAU0 364 aa30.13■■■□□ 2.41
ITGA9-203ENST00000422441 KIAA1524Q8TCG1 905 aa30.13■■■□□ 2.41
ITGA9-203ENST00000422441 WWC3Q9ULE0 1092 aa30.13■■■□□ 2.41
ITGA9-203ENST00000422441 LRP5O75197 1615 aa30.13■■■□□ 2.41
ITGA9-203ENST00000422441 TRDNQ13061 729 aa30.12■■■□□ 2.41
ITGA9-203ENST00000422441 PLA2G4DQ86XP0 818 aa30.12■■■□□ 2.41
ITGA9-203ENST00000422441 PCDHA7Q9UN72 937 aa30.12■■■□□ 2.41
ITGA9-203ENST00000422441 CPLX1O14810 134 aa30.12■■■□□ 2.41
ITGA9-203ENST00000422441 HSP90AA2PQ14568 343 aaPredicted RBP30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms