RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 KCPQ6ZWJ8 1503 aa18.46■□□□□ 0.55
CDH1-202ENST00000422392 MYO5AQ9Y4I1 1855 aaKnown RBP18.46■□□□□ 0.55
CDH1-202ENST00000422392 PARP4Q9UKK3 1724 aaKnown RBP18.46■□□□□ 0.55
CDH1-202ENST00000422392 CTAGE5O15320 804 aa18.46■□□□□ 0.55
CDH1-202ENST00000422392 AOPEPQ8N6M6 819 aa18.46■□□□□ 0.55
CDH1-202ENST00000422392 SPATA31A3Q5VYP0 1347 aa18.46■□□□□ 0.55
CDH1-202ENST00000422392 KLF18A0A0U1RQI7 1052 aa18.45■□□□□ 0.54
CDH1-202ENST00000422392 PRC1O43663 620 aa18.45■□□□□ 0.54
CDH1-202ENST00000422392 CIAO1O76071 339 aa18.45■□□□□ 0.54
CDH1-202ENST00000422392 NDUFA8P51970 172 aa18.45■□□□□ 0.54
CDH1-202ENST00000422392 TPD52L1Q16890 204 aaPredicted RBP18.45■□□□□ 0.54
CDH1-202ENST00000422392 LRRC8AQ8IWT6 810 aa18.45■□□□□ 0.54
CDH1-202ENST00000422392 GOLGA8BA8MQT2 603 aa18.45■□□□□ 0.54
CDH1-202ENST00000422392 CBX1P83916 185 aa18.45■□□□□ 0.54
CDH1-202ENST00000422392 ATP2B3Q16720 1220 aa18.45■□□□□ 0.54
CDH1-202ENST00000422392 NKX2-3Q8TAU0 364 aa18.45■□□□□ 0.54
CDH1-202ENST00000422392 PRDM11Q9NQV5 511 aa18.45■□□□□ 0.54
CDH1-202ENST00000422392 CAVIN2O95810 425 aa18.44■□□□□ 0.54
CDH1-202ENST00000422392 NAA30Q147X3 362 aaPredicted RBP18.44■□□□□ 0.54
CDH1-202ENST00000422392 IMMTQ16891 758 aaKnown RBP18.44■□□□□ 0.54
CDH1-202ENST00000422392 FMR1NBQ8N0W7 255 aaPredicted RBP18.44■□□□□ 0.54
CDH1-202ENST00000422392 MRPS27Q92552 414 aaKnown RBP18.44■□□□□ 0.54
CDH1-202ENST00000422392 SDF4Q9BRK5 362 aa18.44■□□□□ 0.54
CDH1-202ENST00000422392 HPS5Q9UPZ3 1129 aa18.44■□□□□ 0.54
CDH1-202ENST00000422392 MYH7P12883 1935 aa18.44■□□□□ 0.54
CDH1-202ENST00000422392 SPEF2Q9C093 1822 aa18.44■□□□□ 0.54
CDH1-202ENST00000422392 ANTXR2P58335 489 aa18.44■□□□□ 0.54
CDH1-202ENST00000422392 SARM1Q6SZW1 724 aa18.44■□□□□ 0.54
CDH1-202ENST00000422392 ZNF592Q92610 1267 aa18.44■□□□□ 0.54
CDH1-202ENST00000422392 C8orf76Q96K31 380 aa18.44■□□□□ 0.54
CDH1-202ENST00000422392 TAF7LQ5H9L4 462 aa18.43■□□□□ 0.54
CDH1-202ENST00000422392 PKNOX2Q96KN3 472 aa18.43■□□□□ 0.54
CDH1-202ENST00000422392 ANO10Q9NW15 660 aa18.43■□□□□ 0.54
CDH1-202ENST00000422392 ORC3Q9UBD5 711 aaPredicted RBP18.43■□□□□ 0.54
CDH1-202ENST00000422392 KIF28PB7ZC32 967 aa18.43■□□□□ 0.54
CDH1-202ENST00000422392 CTIFO43310 598 aaKnown RBP18.43■□□□□ 0.54
CDH1-202ENST00000422392 CDC25BP30305 580 aa18.43■□□□□ 0.54
CDH1-202ENST00000422392 STK38Q15208 465 aa18.43■□□□□ 0.54
CDH1-202ENST00000422392 SF3A1Q15459 793 aaKnown RBP18.43■□□□□ 0.54
CDH1-202ENST00000422392 MB21D2Q8IYB1 491 aaPredicted RBP18.43■□□□□ 0.54
CDH1-202ENST00000422392 PDCL2Q8N4E4 241 aa18.43■□□□□ 0.54
CDH1-202ENST00000422392 LINC00301Q8NCQ3 95 aa18.43■□□□□ 0.54
CDH1-202ENST00000422392 MRFAP1L1Q96HT8 127 aa18.43■□□□□ 0.54
CDH1-202ENST00000422392 ISCA1Q9BUE6 129 aa18.43■□□□□ 0.54
CDH1-202ENST00000422392 WDR17Q8IZU2 1322 aa18.42■□□□□ 0.54
CDH1-202ENST00000422392 SPDYE4A6NLX3 237 aa18.42■□□□□ 0.54
CDH1-202ENST00000422392 ERVV-2B6SEH9 535 aa18.42■□□□□ 0.54
CDH1-202ENST00000422392 RXRAP19793 462 aa18.42■□□□□ 0.54
CDH1-202ENST00000422392 ADALQ6DHV7 355 aa18.42■□□□□ 0.54
CDH1-202ENST00000422392 ATG3Q9NT62 314 aa18.42■□□□□ 0.54
CDH1-202ENST00000422392 RTEL1Q9NZ71 1219 aa18.42■□□□□ 0.54
CDH1-202ENST00000422392 BIN1O00499 593 aa18.42■□□□□ 0.54
CDH1-202ENST00000422392 GPAA1O43292 621 aa18.42■□□□□ 0.54
CDH1-202ENST00000422392 TCIRG1Q13488 830 aa18.42■□□□□ 0.54
CDH1-202ENST00000422392 DPCR1Q3MIW9 517 aa18.42■□□□□ 0.54
CDH1-202ENST00000422392 AIFM3Q96NN9 605 aa18.42■□□□□ 0.54
CDH1-202ENST00000422392 EVCP57679 992 aa18.41■□□□□ 0.54
CDH1-202ENST00000422392 ATL3Q6DD88 541 aa18.41■□□□□ 0.54
CDH1-202ENST00000422392 CEP57L1Q8IYX8 460 aa18.41■□□□□ 0.54
CDH1-202ENST00000422392 FBXO18Q8NFZ0 1043 aa18.41■□□□□ 0.54
CDH1-202ENST00000422392 STRN4Q9NRL3 753 aa18.41■□□□□ 0.54
CDH1-202ENST00000422392 TRMT1Q9NXH9 659 aaKnown RBP18.41■□□□□ 0.54
CDH1-202ENST00000422392 CTNNA3Q9UI47 895 aa18.41■□□□□ 0.54
CDH1-202ENST00000422392 CPDO75976 1380 aa18.41■□□□□ 0.54
CDH1-202ENST00000422392 SKILP12757 684 aa18.41■□□□□ 0.54
CDH1-202ENST00000422392 U2AF2P26368 475 aaKnown RBP eCLIP18.41■□□□□ 0.54
CDH1-202ENST00000422392 CCDC69A6NI79 296 aa18.4■□□□□ 0.54
CDH1-202ENST00000422392 CPLX1O14810 134 aa18.4■□□□□ 0.54
CDH1-202ENST00000422392 GPTP24298 496 aa18.4■□□□□ 0.54
CDH1-202ENST00000422392 NCBP1Q09161 790 aaKnown RBP18.4■□□□□ 0.54
CDH1-202ENST00000422392 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.4■□□□□ 0.54
CDH1-202ENST00000422392 ANKRD7Q92527 254 aa18.4■□□□□ 0.54
CDH1-202ENST00000422392 AKAP11Q9UKA4 1901 aa18.4■□□□□ 0.54
CDH1-202ENST00000422392 NEDD4P46934 1319 aa18.4■□□□□ 0.54
CDH1-202ENST00000422392 MCAMP43121 646 aa18.4■□□□□ 0.54
CDH1-202ENST00000422392 MYSM1Q5VVJ2 828 aa18.4■□□□□ 0.54
CDH1-202ENST00000422392 ISM2Q6H9L7 571 aa18.4■□□□□ 0.54
CDH1-202ENST00000422392 RALYLQ86SE5 291 aaKnown RBP18.4■□□□□ 0.54
CDH1-202ENST00000422392 CADPS2Q86UW7 1296 aa18.4■□□□□ 0.54
CDH1-202ENST00000422392 NCOA7Q8NI08 942 aa18.4■□□□□ 0.54
CDH1-202ENST00000422392 APPBP2Q92624 585 aa18.4■□□□□ 0.54
CDH1-202ENST00000422392 AKAP2Q9Y2D5 859 aa18.4■□□□□ 0.54
CDH1-202ENST00000422392 SMTNL1A8MU46 457 aa18.39■□□□□ 0.54
CDH1-202ENST00000422392 ZNF213O14771 459 aa18.39■□□□□ 0.54
CDH1-202ENST00000422392 SPTLC2O15270 562 aa18.39■□□□□ 0.54
CDH1-202ENST00000422392 MARCKSP29966 332 aaPredicted RBP18.39■□□□□ 0.53
CDH1-202ENST00000422392 CCZ1BP86790 482 aa18.39■□□□□ 0.53
CDH1-202ENST00000422392 CCZ1P86791 482 aaPredicted RBP18.39■□□□□ 0.53
CDH1-202ENST00000422392 IFIT5Q13325 482 aaKnown RBP18.39■□□□□ 0.53
CDH1-202ENST00000422392 DNAJC10Q8IXB1 793 aa18.39■□□□□ 0.53
CDH1-202ENST00000422392 FBXL16Q8N461 479 aa18.39■□□□□ 0.53
CDH1-202ENST00000422392 NBPF3Q9H094 633 aa18.39■□□□□ 0.53
CDH1-202ENST00000422392 IL2RBP14784 551 aa18.38■□□□□ 0.53
CDH1-202ENST00000422392 NBPF11Q86T75 865 aa18.38■□□□□ 0.53
CDH1-202ENST00000422392 SENP2Q9HC62 589 aa18.38■□□□□ 0.53
CDH1-202ENST00000422392 KIAA1468Q9P260 1216 aa18.38■□□□□ 0.53
CDH1-202ENST00000422392 ASAP1Q9ULH1 1129 aa18.38■□□□□ 0.53
CDH1-202ENST00000422392 PAPPAQ13219 1627 aa18.38■□□□□ 0.53
CDH1-202ENST00000422392 ZFYP08048 801 aaPredicted RBP18.38■□□□□ 0.53
CDH1-202ENST00000422392 METTL24Q5JXM2 366 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms