RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 STX8Q9UNK0 236 aa13.94□□□□□ -0.18
CLCN4-203ENST00000421085 MAP3K9P80192 1104 aa13.94□□□□□ -0.18
CLCN4-203ENST00000421085 STMN2Q93045 179 aa13.94□□□□□ -0.18
CLCN4-203ENST00000421085 IFT74Q96LB3 600 aa13.94□□□□□ -0.18
CLCN4-203ENST00000421085 TRIM7Q9C029 511 aa13.94□□□□□ -0.18
CLCN4-203ENST00000421085 SLC4A4Q9Y6R1 1079 aa13.94□□□□□ -0.18
CLCN4-203ENST00000421085 ELP1O95163 1332 aa13.94□□□□□ -0.18
CLCN4-203ENST00000421085 PPP1R7Q15435 360 aa13.94□□□□□ -0.18
CLCN4-203ENST00000421085 BICD1Q96G01 975 aa13.94□□□□□ -0.18
CLCN4-203ENST00000421085 PPP1R1BQ9UD71 204 aaPredicted RBP13.94□□□□□ -0.18
CLCN4-203ENST00000421085 TUBB2AQ13885 445 aa13.93□□□□□ -0.18
CLCN4-203ENST00000421085 TUBB2BQ9BVA1 445 aa13.93□□□□□ -0.18
CLCN4-203ENST00000421085 TTC41PQ6P2S7 1318 aa13.93□□□□□ -0.18
CLCN4-203ENST00000421085 EEF2P13639 858 aaKnown RBP13.93□□□□□ -0.18
CLCN4-203ENST00000421085 FBLN1P23142 703 aa13.93□□□□□ -0.18
CLCN4-203ENST00000421085 SYNCQ9H7C4 482 aa13.93□□□□□ -0.18
CLCN4-203ENST00000421085 PA2G4Q9UQ80 394 aaKnown RBP13.93□□□□□ -0.18
CLCN4-203ENST00000421085 SBNO2Q9Y2G9 1366 aa13.93□□□□□ -0.18
CLCN4-203ENST00000421085 FAM135AQ9P2D6 1515 aa13.93□□□□□ -0.18
CLCN4-203ENST00000421085 UQCRFS1P1P0C7P4 283 aa13.93□□□□□ -0.18
CLCN4-203ENST00000421085 SLF2Q8IX21 1173 aa13.93□□□□□ -0.18
CLCN4-203ENST00000421085 CLSTN2Q9H4D0 955 aa13.93□□□□□ -0.18
CLCN4-203ENST00000421085 KRT2P35908 639 aa13.93□□□□□ -0.18
CLCN4-203ENST00000421085 PLCB3Q01970 1234 aa13.93□□□□□ -0.18
CLCN4-203ENST00000421085 LMNTD2Q8IXW0 634 aa13.93□□□□□ -0.18
CLCN4-203ENST00000421085 FANCCQ00597 558 aa13.93□□□□□ -0.18
CLCN4-203ENST00000421085 C8orf74Q6P047 294 aa13.93□□□□□ -0.18
CLCN4-203ENST00000421085 ANKRD36BQ8N2N9 1353 aa13.92□□□□□ -0.18
CLCN4-203ENST00000421085 WASLO00401 505 aaPredicted RBP13.92□□□□□ -0.18
CLCN4-203ENST00000421085 NOL3O60936 208 aaKnown RBP13.92□□□□□ -0.18
CLCN4-203ENST00000421085 GADD45BO75293 160 aaPredicted RBP13.92□□□□□ -0.18
CLCN4-203ENST00000421085 TTF2Q9UNY4 1162 aaKnown RBP13.92□□□□□ -0.18
CLCN4-203ENST00000421085 TOP2BQ02880 1626 aa13.92□□□□□ -0.18
CLCN4-203ENST00000421085 SWAP70Q9UH65 585 aa13.92□□□□□ -0.18
CLCN4-203ENST00000421085 CTNND2Q9UQB3 1225 aa13.92□□□□□ -0.18
CLCN4-203ENST00000421085 ASXL1Q8IXJ9 1541 aa13.92□□□□□ -0.18
CLCN4-203ENST00000421085 PSMC4P43686 418 aa13.92□□□□□ -0.18
CLCN4-203ENST00000421085 ATL3Q6DD88 541 aa13.92□□□□□ -0.18
CLCN4-203ENST00000421085 DHX32Q7L7V1 743 aaKnown RBP13.92□□□□□ -0.18
CLCN4-203ENST00000421085 ANAPC4Q9UJX5 808 aa13.92□□□□□ -0.18
CLCN4-203ENST00000421085 MCM7P33993 719 aa13.92□□□□□ -0.18
CLCN4-203ENST00000421085 LMBRD1Q9NUN5 540 aa13.92□□□□□ -0.18
CLCN4-203ENST00000421085 PAG1Q9NWQ8 432 aa13.92□□□□□ -0.18
CLCN4-203ENST00000421085 CALCOCO2Q13137 446 aa13.92□□□□□ -0.18
CLCN4-203ENST00000421085 ANKRD13DQ6ZTN6 518 aa13.92□□□□□ -0.18
CLCN4-203ENST00000421085 CCDC26Q8TAB7 109 aa13.92□□□□□ -0.18
CLCN4-203ENST00000421085 CRNKL1Q9BZJ0 848 aaKnown RBP13.92□□□□□ -0.18
CLCN4-203ENST00000421085 PPP1R12CQ9BZL4 782 aa13.92□□□□□ -0.18
CLCN4-203ENST00000421085 NKIRAS1Q9NYS0 192 aa13.92□□□□□ -0.18
CLCN4-203ENST00000421085 BAG3O95817 575 aa13.91□□□□□ -0.18
CLCN4-203ENST00000421085 CYP26C1Q6V0L0 522 aa13.91□□□□□ -0.18
CLCN4-203ENST00000421085 GOLGA6BA6NDN3 693 aa13.91□□□□□ -0.18
CLCN4-203ENST00000421085 TSPY3P0CV98 308 aa13.91□□□□□ -0.18
CLCN4-203ENST00000421085 TSPY8P0CW00 308 aa13.91□□□□□ -0.18
CLCN4-203ENST00000421085 ZSCAN26Q16670 478 aa13.91□□□□□ -0.18
CLCN4-203ENST00000421085 UTP14CQ5TAP6 766 aaKnown RBP13.91□□□□□ -0.18
CLCN4-203ENST00000421085 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.91□□□□□ -0.18
CLCN4-203ENST00000421085 FEZ2Q9UHY8 353 aaPredicted RBP13.91□□□□□ -0.18
CLCN4-203ENST00000421085 NUTM2BA6NNL0 878 aaPredicted RBP13.91□□□□□ -0.18
CLCN4-203ENST00000421085 NUTM2EB1AL46 878 aaPredicted RBP13.91□□□□□ -0.18
CLCN4-203ENST00000421085 ZPR1O75312 459 aa13.91□□□□□ -0.18
CLCN4-203ENST00000421085 VPS16Q9H269 839 aa13.91□□□□□ -0.18
CLCN4-203ENST00000421085 IMPACTQ9P2X3 320 aa13.91□□□□□ -0.18
CLCN4-203ENST00000421085 PARD3Q8TEW0 1356 aa13.91□□□□□ -0.18
CLCN4-203ENST00000421085 ARHGAP25P42331 645 aa13.91□□□□□ -0.18
CLCN4-203ENST00000421085 PPARDQ03181 441 aa13.91□□□□□ -0.18
CLCN4-203ENST00000421085 PLIN2Q99541 437 aa13.91□□□□□ -0.18
CLCN4-203ENST00000421085 RXRAP19793 462 aa13.91□□□□□ -0.18
CLCN4-203ENST00000421085 RNASE9P60153 205 aaKnown RBP13.91□□□□□ -0.18
CLCN4-203ENST00000421085 RAPGEF3O95398 923 aa13.9□□□□□ -0.18
CLCN4-203ENST00000421085 CYP7A1P22680 504 aa13.9□□□□□ -0.18
CLCN4-203ENST00000421085 CEP85LQ5SZL2 805 aa13.9□□□□□ -0.18
CLCN4-203ENST00000421085 SLC9C2Q5TAH2 1124 aa13.9□□□□□ -0.18
CLCN4-203ENST00000421085 ATP6V0A2Q9Y487 856 aa13.9□□□□□ -0.18
CLCN4-203ENST00000421085 A6NNZ2 444 aa13.9□□□□□ -0.18
CLCN4-203ENST00000421085 GRM8O00222 908 aa13.9□□□□□ -0.18
CLCN4-203ENST00000421085 CIB2O75838 187 aa13.9□□□□□ -0.18
CLCN4-203ENST00000421085 ALDH3A1P30838 453 aa13.9□□□□□ -0.18
CLCN4-203ENST00000421085 GBP1P32455 592 aa13.9□□□□□ -0.18
CLCN4-203ENST00000421085 NAPAP54920 295 aa13.9□□□□□ -0.18
CLCN4-203ENST00000421085 TUBB8Q3ZCM7 444 aa13.9□□□□□ -0.18
CLCN4-203ENST00000421085 CACNA2D3Q8IZS8 1091 aa13.9□□□□□ -0.18
CLCN4-203ENST00000421085 MIPOL1Q8TD10 442 aa13.9□□□□□ -0.18
CLCN4-203ENST00000421085 SF3B2Q13435 895 aaKnown RBP13.9□□□□□ -0.18
CLCN4-203ENST00000421085 MAP7D1Q3KQU3 841 aa13.9□□□□□ -0.18
CLCN4-203ENST00000421085 IQUBQ8NA54 791 aa13.9□□□□□ -0.18
CLCN4-203ENST00000421085 MKRN1Q9UHC7 482 aaKnown RBP13.9□□□□□ -0.18
CLCN4-203ENST00000421085 TTC16Q8NEE8 873 aa13.9□□□□□ -0.18
CLCN4-203ENST00000421085 ARHGEF11O15085 1522 aa13.9□□□□□ -0.18
CLCN4-203ENST00000421085 MAP2K2P36507 400 aa13.9□□□□□ -0.18
CLCN4-203ENST00000421085 FAM173BQ6P4H8 233 aa13.9□□□□□ -0.19
CLCN4-203ENST00000421085 USP37Q86T82 979 aa13.9□□□□□ -0.19
CLCN4-203ENST00000421085 LDHCP07864 332 aa13.89□□□□□ -0.19
CLCN4-203ENST00000421085 TSPYL6Q8N831 410 aa13.89□□□□□ -0.19
CLCN4-203ENST00000421085 JAKMIP2Q96AA8 810 aa13.89□□□□□ -0.19
CLCN4-203ENST00000421085 MTUS1Q9ULD2 1270 aa13.89□□□□□ -0.19
CLCN4-203ENST00000421085 ATP5DP30049 168 aa13.89□□□□□ -0.19
CLCN4-203ENST00000421085 PNMA8AQ86V59 439 aaPredicted RBP13.89□□□□□ -0.19
CLCN4-203ENST00000421085 NEDD9Q14511 834 aa13.89□□□□□ -0.19
CLCN4-203ENST00000421085 IFT20Q8IY31 132 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms