RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 DBNDD1Q9H9R9 158 aa15.21■□□□□ 0.03
TMEM53-206ENST00000420706 FRAT2O75474 233 aaPredicted RBP15.2■□□□□ 0.02
TMEM53-206ENST00000420706 BMP2KLQ5H9B9 411 aa15.2■□□□□ 0.02
TMEM53-206ENST00000420706 DNAJC2Q99543 621 aaKnown RBP15.2■□□□□ 0.02
TMEM53-206ENST00000420706 CHD4Q14839 1912 aa15.19■□□□□ 0.02
TMEM53-206ENST00000420706 TRIM6-TRIM34B2RNG4 842 aa15.19■□□□□ 0.02
TMEM53-206ENST00000420706 ECE2O60344 883 aa15.19■□□□□ 0.02
TMEM53-206ENST00000420706 CYP2E1P05181 493 aaPredicted RBP15.19■□□□□ 0.02
TMEM53-206ENST00000420706 SDSP20132 328 aa15.19■□□□□ 0.02
TMEM53-206ENST00000420706 EDC3Q96F86 508 aaKnown RBP15.19■□□□□ 0.02
TMEM53-206ENST00000420706 ANTXR1Q9H6X2 564 aa15.19■□□□□ 0.02
TMEM53-206ENST00000420706 PAG1Q9NWQ8 432 aa15.19■□□□□ 0.02
TMEM53-206ENST00000420706 PDS5AQ29RF7 1337 aaKnown RBP15.18■□□□□ 0.02
TMEM53-206ENST00000420706 FAM205AQ6ZU69 1335 aa15.18■□□□□ 0.02
TMEM53-206ENST00000420706 GOLIM4O00461 696 aa15.18■□□□□ 0.02
TMEM53-206ENST00000420706 CHAF1AQ13111 956 aaPredicted RBP15.18■□□□□ 0.02
TMEM53-206ENST00000420706 CNTROBQ8N137 903 aa15.18■□□□□ 0.02
TMEM53-206ENST00000420706 RILPL2Q969X0 211 aa15.18■□□□□ 0.02
TMEM53-206ENST00000420706 EVI5LQ96CN4 794 aa15.18■□□□□ 0.02
TMEM53-206ENST00000420706 KCNQ5Q9NR82 932 aa15.18■□□□□ 0.02
TMEM53-206ENST00000420706 COL1A1P02452 1464 aaPredicted RBP15.18■□□□□ 0.02
TMEM53-206ENST00000420706 CCDC88AQ3V6T2 1871 aa15.17■□□□□ 0.02
TMEM53-206ENST00000420706 COL4A5P29400 1685 aa15.17■□□□□ 0.02
TMEM53-206ENST00000420706 YDJCA8MPS7 323 aa15.17■□□□□ 0.02
TMEM53-206ENST00000420706 GRIN3BO60391 1043 aa15.17■□□□□ 0.02
TMEM53-206ENST00000420706 GTF2IP78347 998 aa15.17■□□□□ 0.02
TMEM53-206ENST00000420706 TTLL5Q6EMB2 1281 aa15.17■□□□□ 0.02
TMEM53-206ENST00000420706 TBC1D9Q6ZT07 1266 aa15.17■□□□□ 0.02
TMEM53-206ENST00000420706 NIM1KQ8IY84 436 aa15.17■□□□□ 0.02
TMEM53-206ENST00000420706 WDR66Q8TBY9 1149 aa15.17■□□□□ 0.02
TMEM53-206ENST00000420706 JDP2Q8WYK2 163 aa15.17■□□□□ 0.02
TMEM53-206ENST00000420706 ZNRF3Q9ULT6 936 aa15.17■□□□□ 0.02
TMEM53-206ENST00000420706 JAG2Q9Y219 1238 aa15.17■□□□□ 0.02
TMEM53-206ENST00000420706 MYH13Q9UKX3 1938 aa15.17■□□□□ 0.02
TMEM53-206ENST00000420706 LMNB1P20700 586 aa15.16■□□□□ 0.02
TMEM53-206ENST00000420706 TTF1Q15361 905 aaPredicted RBP15.16■□□□□ 0.02
TMEM53-206ENST00000420706 KBTBD3Q8NAB2 608 aa15.16■□□□□ 0.02
TMEM53-206ENST00000420706 PIH1D3Q9NQM4 214 aaKnown RBP15.16■□□□□ 0.02
TMEM53-206ENST00000420706 SBF1O95248 1867 aa15.16■□□□□ 0.02
TMEM53-206ENST00000420706 SALL1Q9NSC2 1324 aa15.16■□□□□ 0.02
TMEM53-206ENST00000420706 STRIP1Q5VSL9 837 aa15.15■□□□□ 0.02
TMEM53-206ENST00000420706 SCN9AQ15858 1988 aa15.15■□□□□ 0.02
TMEM53-206ENST00000420706 USP17L3A6NCW0 530 aa15.14■□□□□ 0.01
TMEM53-206ENST00000420706 USP17L4A6NCW7 530 aa15.14■□□□□ 0.01
TMEM53-206ENST00000420706 USP17L1Q7RTZ2 530 aa15.14■□□□□ 0.01
TMEM53-206ENST00000420706 ZGPATQ8N5A5 531 aaKnown RBP15.14■□□□□ 0.01
TMEM53-206ENST00000420706 TBC1D22AQ8WUA7 517 aa15.14■□□□□ 0.01
TMEM53-206ENST00000420706 FBXW7Q969H0 707 aa15.14■□□□□ 0.01
TMEM53-206ENST00000420706 FSD1Q9BTV5 496 aa15.14■□□□□ 0.01
TMEM53-206ENST00000420706 ABCF2Q9UG63 623 aa15.14■□□□□ 0.01
TMEM53-206ENST00000420706 MYO5AQ9Y4I1 1855 aaKnown RBP15.14■□□□□ 0.01
TMEM53-206ENST00000420706 FZD9O00144 591 aa15.13■□□□□ 0.01
TMEM53-206ENST00000420706 FKBP1AP62942 108 aaKnown RBP15.13■□□□□ 0.01
TMEM53-206ENST00000420706 CXCL9Q07325 125 aa15.13■□□□□ 0.01
TMEM53-206ENST00000420706 MFSD14BQ5SR56 506 aa15.13■□□□□ 0.01
TMEM53-206ENST00000420706 DACT2Q5SW24 774 aa15.13■□□□□ 0.01
TMEM53-206ENST00000420706 ERICH6Q7L0X2 663 aa15.13■□□□□ 0.01
TMEM53-206ENST00000420706 LRP2BPQ9P2M1 347 aa15.13■□□□□ 0.01
TMEM53-206ENST00000420706 AK9Q5TCS8 1911 aa15.13■□□□□ 0.01
TMEM53-206ENST00000420706 DICER1Q9UPY3 1922 aaKnown RBP15.13■□□□□ 0.01
TMEM53-206ENST00000420706 IDH1O75874 414 aaKnown RBP15.12■□□□□ 0.01
TMEM53-206ENST00000420706 RAD17O75943 681 aa15.12■□□□□ 0.01
TMEM53-206ENST00000420706 VIL1P09327 827 aaKnown RBP15.12■□□□□ 0.01
TMEM53-206ENST00000420706 GRIK5Q16478 980 aa15.12■□□□□ 0.01
TMEM53-206ENST00000420706 SPTY2D1Q68D10 685 aaPredicted RBP15.12■□□□□ 0.01
TMEM53-206ENST00000420706 TICAM2Q86XR7 235 aa15.12■□□□□ 0.01
TMEM53-206ENST00000420706 CERS5Q8N5B7 392 aa15.12■□□□□ 0.01
TMEM53-206ENST00000420706 MXD3Q9BW11 206 aa15.12■□□□□ 0.01
TMEM53-206ENST00000420706 PSME4Q14997 1843 aa15.11■□□□□ 0.01
TMEM53-206ENST00000420706 PSMD14O00487 310 aa15.11■□□□□ 0.01
TMEM53-206ENST00000420706 RNF113AO15541 343 aaKnown RBP15.11■□□□□ 0.01
TMEM53-206ENST00000420706 IGSF3O75054 1194 aa15.11■□□□□ 0.01
TMEM53-206ENST00000420706 CHGBP05060 677 aa15.11■□□□□ 0.01
TMEM53-206ENST00000420706 CHMLP26374 656 aa15.11■□□□□ 0.01
TMEM53-206ENST00000420706 PRDX5P30044 214 aa15.11■□□□□ 0.01
TMEM53-206ENST00000420706 EIF6P56537 245 aaKnown RBP15.11■□□□□ 0.01
TMEM53-206ENST00000420706 MAP3K12Q12852 859 aa15.11■□□□□ 0.01
TMEM53-206ENST00000420706 C9orf131Q5VYM1 1079 aa15.11■□□□□ 0.01
TMEM53-206ENST00000420706 CIAPIN1Q6FI81 312 aa15.11■□□□□ 0.01
TMEM53-206ENST00000420706 RAI14Q9P0K7 980 aa15.11■□□□□ 0.01
TMEM53-206ENST00000420706 RNF181Q9P0P0 153 aa15.11■□□□□ 0.01
TMEM53-206ENST00000420706 SUGT1Q9Y2Z0 365 aa15.11■□□□□ 0.01
TMEM53-206ENST00000420706 ZNF646O15015 1829 aaPredicted RBP15.1■□□□□ 0.01
TMEM53-206ENST00000420706 DOCK2Q92608 1830 aa15.1■□□□□ 0.01
TMEM53-206ENST00000420706 CDC45O75419 566 aa15.1■□□□□ 0.01
TMEM53-206ENST00000420706 LDHBP07195 334 aaKnown RBP15.1■□□□□ 0.01
TMEM53-206ENST00000420706 ADD2P35612 726 aa15.1■□□□□ 0.01
TMEM53-206ENST00000420706 TNIP1Q15025 636 aa15.1■□□□□ 0.01
TMEM53-206ENST00000420706 LRRFIP1Q32MZ4 808 aaKnown RBP15.1■□□□□ 0.01
TMEM53-206ENST00000420706 SLFNL1Q499Z3 407 aa15.1■□□□□ 0.01
TMEM53-206ENST00000420706 SLC9C2Q5TAH2 1124 aa15.1■□□□□ 0.01
TMEM53-206ENST00000420706 ZSCAN25Q6NSZ9 544 aa15.1■□□□□ 0.01
TMEM53-206ENST00000420706 NSUN4Q96CB9 384 aaKnown RBP15.1■□□□□ 0.01
TMEM53-206ENST00000420706 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.1■□□□□ 0.01
TMEM53-206ENST00000420706 RFX7Q2KHR2 1363 aa15.1■□□□□ 0.01
TMEM53-206ENST00000420706 HIP1O00291 1037 aa15.09■□□□□ 0.01
TMEM53-206ENST00000420706 ZFYP08048 801 aaPredicted RBP15.09■□□□□ 0.01
TMEM53-206ENST00000420706 PDE6AP16499 860 aa15.09■□□□□ 0.01
TMEM53-206ENST00000420706 MECOMQ03112 1051 aa15.09■□□□□ 0.01
TMEM53-206ENST00000420706 UBE3CQ15386 1083 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms