RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 NALCNQ8IZF0 1738 aa9.28□□□□□ -0.92
EPHA4-205ENST00000419964 SCNN1AP37088 669 aa9.28□□□□□ -0.92
EPHA4-205ENST00000419964 TMPOP42166 694 aaKnown RBP9.28□□□□□ -0.92
EPHA4-205ENST00000419964 ZNF428Q96B54 188 aa9.28□□□□□ -0.92
EPHA4-205ENST00000419964 PARP3Q9Y6F1 533 aa9.28□□□□□ -0.92
EPHA4-205ENST00000419964 USP54Q70EL1 1684 aa9.28□□□□□ -0.92
EPHA4-205ENST00000419964 NCOA3Q9Y6Q9 1424 aa9.28□□□□□ -0.92
EPHA4-205ENST00000419964 PPM1GO15355 546 aaPredicted RBP9.27□□□□□ -0.93
EPHA4-205ENST00000419964 PHKA2P46019 1235 aa9.27□□□□□ -0.93
EPHA4-205ENST00000419964 PDE3AQ14432 1141 aa9.27□□□□□ -0.93
EPHA4-205ENST00000419964 AIDAQ96BJ3 306 aa9.27□□□□□ -0.93
EPHA4-205ENST00000419964 DNMT3LQ9UJW3 386 aa9.27□□□□□ -0.93
EPHA4-205ENST00000419964 MAP2P11137 1827 aaKnown RBP9.26□□□□□ -0.93
EPHA4-205ENST00000419964 SENP3-EIF4A1A0A087X0R7 540 aa9.26□□□□□ -0.93
EPHA4-205ENST00000419964 CANXP27824 592 aaKnown RBP9.26□□□□□ -0.93
EPHA4-205ENST00000419964 IL13P35225 146 aa9.26□□□□□ -0.93
EPHA4-205ENST00000419964 NAA30Q147X3 362 aaPredicted RBP9.26□□□□□ -0.93
EPHA4-205ENST00000419964 C1orf53Q5VUE5 145 aa9.26□□□□□ -0.93
EPHA4-205ENST00000419964 CAPN12Q6ZSI9 719 aa9.26□□□□□ -0.93
EPHA4-205ENST00000419964 GTF3C2Q8WUA4 911 aaPredicted RBP9.26□□□□□ -0.93
EPHA4-205ENST00000419964 TIMMDC1Q9NPL8 285 aa9.26□□□□□ -0.93
EPHA4-205ENST00000419964 SEPT3Q9UH03 358 aa9.26□□□□□ -0.93
EPHA4-205ENST00000419964 HCN4Q9Y3Q4 1203 aa9.26□□□□□ -0.93
EPHA4-205ENST00000419964 SBNO1A3KN83 1393 aa9.25□□□□□ -0.93
EPHA4-205ENST00000419964 FLT4P35916 1363 aa9.25□□□□□ -0.93
EPHA4-205ENST00000419964 ABL1P00519 1130 aa9.25□□□□□ -0.93
EPHA4-205ENST00000419964 RHOQP17081 205 aa9.25□□□□□ -0.93
EPHA4-205ENST00000419964 TATP17735 454 aaPredicted RBP9.25□□□□□ -0.93
EPHA4-205ENST00000419964 RIPK4P57078 832 aa9.25□□□□□ -0.93
EPHA4-205ENST00000419964 NFE2L2Q16236 605 aa9.25□□□□□ -0.93
EPHA4-205ENST00000419964 SH3PXD2AQ5TCZ1 1133 aa9.25□□□□□ -0.93
EPHA4-205ENST00000419964 C16orf46Q6P387 395 aa9.25□□□□□ -0.93
EPHA4-205ENST00000419964 ALDH16A1Q8IZ83 802 aa9.25□□□□□ -0.93
EPHA4-205ENST00000419964 NGLY1Q96IV0 654 aa9.25□□□□□ -0.93
EPHA4-205ENST00000419964 ZDHHC3Q9NYG2 299 aa9.25□□□□□ -0.93
EPHA4-205ENST00000419964 EGFL7Q9UHF1 273 aa9.25□□□□□ -0.93
EPHA4-205ENST00000419964 RTL1A6NKG5 1358 aa9.24□□□□□ -0.93
EPHA4-205ENST00000419964 A0A1B0GTH6 734 aa9.24□□□□□ -0.93
EPHA4-205ENST00000419964 PRKAR2BP31323 418 aa9.24□□□□□ -0.93
EPHA4-205ENST00000419964 SERPINB4P48594 390 aa9.24□□□□□ -0.93
EPHA4-205ENST00000419964 RTN1Q16799 776 aa9.24□□□□□ -0.93
EPHA4-205ENST00000419964 MYO19Q96H55 970 aa9.24□□□□□ -0.93
EPHA4-205ENST00000419964 TRIM47Q96LD4 638 aa9.24□□□□□ -0.93
EPHA4-205ENST00000419964 PHACTR1Q9C0D0 580 aa9.24□□□□□ -0.93
EPHA4-205ENST00000419964 GZF1Q9H116 711 aaPredicted RBP9.24□□□□□ -0.93
EPHA4-205ENST00000419964 ARHGEF10O15013 1369 aa9.24□□□□□ -0.93
EPHA4-205ENST00000419964 DCCP43146 1447 aa9.23□□□□□ -0.93
EPHA4-205ENST00000419964 TXLNAP40222 546 aa9.23□□□□□ -0.93
EPHA4-205ENST00000419964 GNAI1P63096 354 aa9.23□□□□□ -0.93
EPHA4-205ENST00000419964 SF3B2Q13435 895 aaKnown RBP9.23□□□□□ -0.93
EPHA4-205ENST00000419964 KCNH5Q8NCM2 988 aa9.23□□□□□ -0.93
EPHA4-205ENST00000419964 PMFBP1Q8TBY8 1022 aa9.23□□□□□ -0.93
EPHA4-205ENST00000419964 CHMP4BQ9H444 224 aaKnown RBP9.23□□□□□ -0.93
EPHA4-205ENST00000419964 QTRT2Q9H974 415 aaKnown RBP9.23□□□□□ -0.93
EPHA4-205ENST00000419964 RRP7AQ9Y3A4 280 aaKnown RBP9.23□□□□□ -0.93
EPHA4-205ENST00000419964 DYRK1BQ9Y463 629 aa9.23□□□□□ -0.93
EPHA4-205ENST00000419964 GPC6Q9Y625 555 aaPredicted RBP9.23□□□□□ -0.93
EPHA4-205ENST00000419964 KIF1AQ12756 1690 aa9.23□□□□□ -0.93
EPHA4-205ENST00000419964 COX20Q5RI15 118 aa9.22□□□□□ -0.93
EPHA4-205ENST00000419964 EXOC6Q8TAG9 804 aa9.22□□□□□ -0.93
EPHA4-205ENST00000419964 HELQQ8TDG4 1101 aa9.22□□□□□ -0.93
EPHA4-205ENST00000419964 IFT57Q9NWB7 429 aa9.22□□□□□ -0.93
EPHA4-205ENST00000419964 PIK3C2AO00443 1686 aa9.21□□□□□ -0.93
EPHA4-205ENST00000419964 TCERG1O14776 1098 aaKnown RBP9.21□□□□□ -0.94
EPHA4-205ENST00000419964 IPO8O15397 1037 aaKnown RBP9.21□□□□□ -0.94
EPHA4-205ENST00000419964 AMPHP49418 695 aa9.21□□□□□ -0.94
EPHA4-205ENST00000419964 RARSP54136 660 aaKnown RBP9.21□□□□□ -0.94
EPHA4-205ENST00000419964 FKBP4Q02790 459 aaKnown RBP eCLIP9.21□□□□□ -0.94
EPHA4-205ENST00000419964 RRS1Q15050 365 aaKnown RBP9.21□□□□□ -0.94
EPHA4-205ENST00000419964 HIF1AQ16665 826 aa9.21□□□□□ -0.94
EPHA4-205ENST00000419964 ALDH1L2Q3SY69 923 aa9.21□□□□□ -0.94
EPHA4-205ENST00000419964 CENPQQ7L2Z9 268 aaPredicted RBP9.21□□□□□ -0.94
EPHA4-205ENST00000419964 ABTB2Q8N961 1025 aa9.21□□□□□ -0.94
EPHA4-205ENST00000419964 RHPN1Q8TCX5 695 aa9.21□□□□□ -0.94
EPHA4-205ENST00000419964 SAP130Q9H0E3 1048 aa9.21□□□□□ -0.94
EPHA4-205ENST00000419964 C19orf44Q9H6X5 657 aa9.21□□□□□ -0.94
EPHA4-205ENST00000419964 GMPR2Q9P2T1 348 aaKnown RBP9.21□□□□□ -0.94
EPHA4-205ENST00000419964 DNMT3AQ9Y6K1 912 aaPredicted RBP9.21□□□□□ -0.94
EPHA4-205ENST00000419964 KIF16BQ96L93 1317 aa9.21□□□□□ -0.94
EPHA4-205ENST00000419964 FANCIQ9NVI1 1328 aa9.21□□□□□ -0.94
EPHA4-205ENST00000419964 SOWAHDA6NJG2 315 aa9.2□□□□□ -0.94
EPHA4-205ENST00000419964 ICMTO60725 284 aa9.2□□□□□ -0.94
EPHA4-205ENST00000419964 F11P03951 625 aa9.2□□□□□ -0.94
EPHA4-205ENST00000419964 MSX1P28360 303 aa9.2□□□□□ -0.94
EPHA4-205ENST00000419964 ZNF211Q13398 564 aaPredicted RBP9.2□□□□□ -0.94
EPHA4-205ENST00000419964 EIF4A2Q14240 407 aaKnown RBP9.2□□□□□ -0.94
EPHA4-205ENST00000419964 C11orf91Q3C1V1 193 aa9.2□□□□□ -0.94
EPHA4-205ENST00000419964 BICDL1Q6ZP65 573 aa9.2□□□□□ -0.94
EPHA4-205ENST00000419964 CRBNQ96SW2 442 aa9.2□□□□□ -0.94
EPHA4-205ENST00000419964 SOBPA7XYQ1 873 aa9.19□□□□□ -0.94
EPHA4-205ENST00000419964 HTATSF1O43719 755 aaKnown RBP9.19□□□□□ -0.94
EPHA4-205ENST00000419964 PLIN1O60240 522 aa9.19□□□□□ -0.94
EPHA4-205ENST00000419964 HMOX1P09601 288 aa9.19□□□□□ -0.94
EPHA4-205ENST00000419964 ARSJQ5FYB0 599 aaPredicted RBP9.19□□□□□ -0.94
EPHA4-205ENST00000419964 ZKSCAN2Q63HK3 967 aa9.19□□□□□ -0.94
EPHA4-205ENST00000419964 SND1Q7KZF4 910 aaKnown RBP eCLIP9.19□□□□□ -0.94
EPHA4-205ENST00000419964 GLYCTKQ8IVS8 523 aa9.19□□□□□ -0.94
EPHA4-205ENST00000419964 NEUROD4Q9HD90 331 aa9.19□□□□□ -0.94
EPHA4-205ENST00000419964 ANO2Q9NQ90 1003 aa9.19□□□□□ -0.94
EPHA4-205ENST00000419964 STIM2Q9P246 746 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms