RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 LIMCH1Q9UPQ0 1083 aa9.72□□□□□ -0.85
COL12A1-204ENST00000419671 FOXP2O15409 715 aa9.71□□□□□ -0.86
COL12A1-204ENST00000419671 PHF14O94880 888 aa9.71□□□□□ -0.86
COL12A1-204ENST00000419671 ZFYP08048 801 aaPredicted RBP9.71□□□□□ -0.86
COL12A1-204ENST00000419671 HSPD1P10809 573 aaKnown RBP9.71□□□□□ -0.86
COL12A1-204ENST00000419671 CHRNDQ07001 517 aa9.71□□□□□ -0.86
COL12A1-204ENST00000419671 A0A0G2JLW4 131 aa9.7□□□□□ -0.86
COL12A1-204ENST00000419671 SLC5A1P13866 664 aa9.7□□□□□ -0.86
COL12A1-204ENST00000419671 RPS6KB1P23443 525 aa9.7□□□□□ -0.86
COL12A1-204ENST00000419671 PSMA5P28066 241 aa9.7□□□□□ -0.86
COL12A1-204ENST00000419671 BLOC1S2Q6QNY1 142 aa9.7□□□□□ -0.86
COL12A1-204ENST00000419671 KRT27Q7Z3Y8 459 aa9.7□□□□□ -0.86
COL12A1-204ENST00000419671 FAM212AQ96EL1 285 aa9.7□□□□□ -0.86
COL12A1-204ENST00000419671 GBP4Q96PP9 640 aa9.7□□□□□ -0.86
COL12A1-204ENST00000419671 CDC5LQ99459 802 aaKnown RBP9.7□□□□□ -0.86
COL12A1-204ENST00000419671 NYXQ9GZU5 481 aa9.7□□□□□ -0.86
COL12A1-204ENST00000419671 PUS7LQ9H0K6 701 aaKnown RBP9.7□□□□□ -0.86
COL12A1-204ENST00000419671 PIH1D3Q9NQM4 214 aaKnown RBP9.7□□□□□ -0.86
COL12A1-204ENST00000419671 DDX11L8A8MPP1 907 aa9.7□□□□□ -0.86
COL12A1-204ENST00000419671 BAG4O95429 457 aaKnown RBP9.7□□□□□ -0.86
COL12A1-204ENST00000419671 UQCRFS1P1P0C7P4 283 aa9.7□□□□□ -0.86
COL12A1-204ENST00000419671 RFC4P35249 363 aa9.7□□□□□ -0.86
COL12A1-204ENST00000419671 ADD2P35612 726 aa9.7□□□□□ -0.86
COL12A1-204ENST00000419671 ST3GAL1Q11201 340 aa9.7□□□□□ -0.86
COL12A1-204ENST00000419671 LRRFIP1Q32MZ4 808 aaKnown RBP9.7□□□□□ -0.86
COL12A1-204ENST00000419671 STOX1Q6ZVD7 989 aa9.7□□□□□ -0.86
COL12A1-204ENST00000419671 NBPF5PQ86XG9 351 aaPredicted RBP9.7□□□□□ -0.86
COL12A1-204ENST00000419671 ANKRD18AQ8IVF6 992 aa9.7□□□□□ -0.86
COL12A1-204ENST00000419671 APPBP2Q92624 585 aa9.7□□□□□ -0.86
COL12A1-204ENST00000419671 TCEANC2Q96MN5 208 aa9.7□□□□□ -0.86
COL12A1-204ENST00000419671 TPCN1Q9ULQ1 816 aa9.7□□□□□ -0.86
COL12A1-204ENST00000419671 WTIPA6NIX2 430 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-204ENST00000419671 TRIM37O94972 964 aa9.69□□□□□ -0.86
COL12A1-204ENST00000419671 GTF2E1P29083 439 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-204ENST00000419671 RASGRF1Q13972 1273 aa9.69□□□□□ -0.86
COL12A1-204ENST00000419671 TOB2Q14106 344 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-204ENST00000419671 KRT32Q14532 448 aa9.69□□□□□ -0.86
COL12A1-204ENST00000419671 TTF1Q15361 905 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-204ENST00000419671 ME3Q16798 604 aa9.69□□□□□ -0.86
COL12A1-204ENST00000419671 TRAPPC3LQ5T215 181 aa9.69□□□□□ -0.86
COL12A1-204ENST00000419671 CCDC24Q8N4L8 307 aa9.69□□□□□ -0.86
COL12A1-204ENST00000419671 KCNV2Q8TDN2 545 aa9.69□□□□□ -0.86
COL12A1-204ENST00000419671 CELF1Q92879 486 aaKnown RBP9.69□□□□□ -0.86
COL12A1-204ENST00000419671 ALDH8A1Q9H2A2 487 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-204ENST00000419671 BSDC1Q9NW68 430 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-204ENST00000419671 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.68□□□□□ -0.86
COL12A1-204ENST00000419671 TCRBV5S4A2TA0A5A2 114 aa9.68□□□□□ -0.86
COL12A1-204ENST00000419671 BRD1O95696 1058 aa9.68□□□□□ -0.86
COL12A1-204ENST00000419671 CDK11BP21127 795 aaKnown RBP9.68□□□□□ -0.86
COL12A1-204ENST00000419671 BCAMP50895 628 aa9.68□□□□□ -0.86
COL12A1-204ENST00000419671 CACNA1SQ13698 1873 aa9.68□□□□□ -0.86
COL12A1-204ENST00000419671 WASHC4Q2M389 1173 aa9.68□□□□□ -0.86
COL12A1-204ENST00000419671 CCDC88AQ3V6T2 1871 aa9.68□□□□□ -0.86
COL12A1-204ENST00000419671 SLC9C2Q5TAH2 1124 aa9.68□□□□□ -0.86
COL12A1-204ENST00000419671 TPTE2Q6XPS3 522 aa9.68□□□□□ -0.86
COL12A1-204ENST00000419671 SPATA5Q8NB90 893 aa9.68□□□□□ -0.86
COL12A1-204ENST00000419671 NEK1Q96PY6 1258 aa9.68□□□□□ -0.86
COL12A1-204ENST00000419671 MINPP1Q9UNW1 487 aa9.68□□□□□ -0.86
COL12A1-204ENST00000419671 CARMIL3Q8ND23 1372 aa9.68□□□□□ -0.86
COL12A1-204ENST00000419671 TNS1Q9HBL0 1735 aaKnown RBP9.68□□□□□ -0.86
COL12A1-204ENST00000419671 TRAK2O60296 914 aa9.68□□□□□ -0.86
COL12A1-204ENST00000419671 TM4SF1P30408 202 aa9.68□□□□□ -0.86
COL12A1-204ENST00000419671 NFIXQ14938 502 aa9.68□□□□□ -0.86
COL12A1-204ENST00000419671 SLC27A3Q5K4L6 730 aa9.68□□□□□ -0.86
COL12A1-204ENST00000419671 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.68□□□□□ -0.86
COL12A1-204ENST00000419671 NLRP3Q96P20 1036 aa9.68□□□□□ -0.86
COL12A1-204ENST00000419671 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.68□□□□□ -0.86
COL12A1-204ENST00000419671 BCCIPQ9P287 314 aaKnown RBP eCLIP9.68□□□□□ -0.86
COL12A1-204ENST00000419671 WWC3Q9ULE0 1092 aa9.68□□□□□ -0.86
COL12A1-204ENST00000419671 COL1A1P02452 1464 aaPredicted RBP9.68□□□□□ -0.86
COL12A1-204ENST00000419671 ZNF804BA4D1E1 1349 aa9.67□□□□□ -0.86
COL12A1-204ENST00000419671 GPAA1O43292 621 aa9.67□□□□□ -0.86
COL12A1-204ENST00000419671 IDH1O75874 414 aaKnown RBP9.67□□□□□ -0.86
COL12A1-204ENST00000419671 PDE6AP16499 860 aa9.67□□□□□ -0.86
COL12A1-204ENST00000419671 MNX1P50219 401 aaPredicted RBP9.67□□□□□ -0.86
COL12A1-204ENST00000419671 UBE3CQ15386 1083 aa9.67□□□□□ -0.86
COL12A1-204ENST00000419671 TTLL5Q6EMB2 1281 aa9.67□□□□□ -0.86
COL12A1-204ENST00000419671 CCDC83Q8IWF9 413 aa9.67□□□□□ -0.86
COL12A1-204ENST00000419671 ZSCAN31Q96LW9 406 aaPredicted RBP9.67□□□□□ -0.86
COL12A1-204ENST00000419671 SGIP1Q9BQI5 828 aa9.67□□□□□ -0.86
COL12A1-204ENST00000419671 SH2B1Q9NRF2 756 aaPredicted RBP9.67□□□□□ -0.86
COL12A1-204ENST00000419671 ANKRD31Q8N7Z5 1873 aa9.67□□□□□ -0.86
COL12A1-204ENST00000419671 ZNF532Q9HCE3 1301 aa9.67□□□□□ -0.86
COL12A1-204ENST00000419671 KIAA1551Q9HCM1 1747 aa9.66□□□□□ -0.86
COL12A1-204ENST00000419671 DTNBO60941 627 aa9.66□□□□□ -0.86
COL12A1-204ENST00000419671 FGAP02671 866 aa9.66□□□□□ -0.86
COL12A1-204ENST00000419671 ANKRD1Q15327 319 aa9.66□□□□□ -0.86
COL12A1-204ENST00000419671 ZSCAN25Q6NSZ9 544 aa9.66□□□□□ -0.86
COL12A1-204ENST00000419671 NECAB1Q8N987 351 aa9.66□□□□□ -0.86
COL12A1-204ENST00000419671 CHAMP1Q96JM3 812 aa9.66□□□□□ -0.86
COL12A1-204ENST00000419671 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.66□□□□□ -0.86
COL12A1-204ENST00000419671 BAZ2AQ9UIF9 1905 aaKnown RBP9.66□□□□□ -0.86
COL12A1-204ENST00000419671 MYH15Q9Y2K3 1946 aa9.66□□□□□ -0.86
COL12A1-204ENST00000419671 E7EWF7 191 aa9.66□□□□□ -0.86
COL12A1-204ENST00000419671 CHRM1P11229 460 aaPredicted RBP9.66□□□□□ -0.86
COL12A1-204ENST00000419671 GYS1P13807 737 aa9.66□□□□□ -0.86
COL12A1-204ENST00000419671 RPS8P62241 208 aaKnown RBP9.66□□□□□ -0.86
COL12A1-204ENST00000419671 RBM6P78332 1123 aaKnown RBP9.66□□□□□ -0.86
COL12A1-204ENST00000419671 UBE4AQ14139 1066 aa9.66□□□□□ -0.86
COL12A1-204ENST00000419671 FOXD4L5Q5VV16 416 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms