RNA–Protein interactions for RNA: ENST00000418006.1

LINC00940-201, long intergenic non-protein coding RNA 940, humanhuman

TSL 2 BASIC

Gene LINC00940, Length 2,350 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00940-201ENST00000418006 PDRG1Q9NUG6 133 aa16.34■□□□□ 0.21
LINC00940-201ENST00000418006 NARFQ9UHQ1 456 aa16.34■□□□□ 0.21
LINC00940-201ENST00000418006 CYP46A1Q9Y6A2 500 aa16.34■□□□□ 0.21
LINC00940-201ENST00000418006 RNF113AO15541 343 aaKnown RBP16.33■□□□□ 0.2
LINC00940-201ENST00000418006 RFC4P35249 363 aa16.33■□□□□ 0.2
LINC00940-201ENST00000418006 PUM3Q15397 648 aaKnown RBP16.33■□□□□ 0.2
LINC00940-201ENST00000418006 RC3H1Q5TC82 1133 aaKnown RBP16.33■□□□□ 0.2
LINC00940-201ENST00000418006 RNF20Q5VTR2 975 aa16.33■□□□□ 0.2
LINC00940-201ENST00000418006 NBPF5PQ86XG9 351 aaPredicted RBP16.33■□□□□ 0.2
LINC00940-201ENST00000418006 MROH5Q6ZUA9 1318 aa16.33■□□□□ 0.2
LINC00940-201ENST00000418006 CCDC102BQ68D86 513 aa16.33■□□□□ 0.2
LINC00940-201ENST00000418006 IL17RAQ96F46 866 aa16.33■□□□□ 0.2
LINC00940-201ENST00000418006 TTC14Q96N46 770 aa16.33■□□□□ 0.2
LINC00940-201ENST00000418006 KDM4AO75164 1064 aa16.32■□□□□ 0.2
LINC00940-201ENST00000418006 HSP90B1P14625 803 aaKnown RBP16.32■□□□□ 0.2
LINC00940-201ENST00000418006 RUFY3Q7L099 469 aa16.32■□□□□ 0.2
LINC00940-201ENST00000418006 ANKRD7Q92527 254 aa16.32■□□□□ 0.2
LINC00940-201ENST00000418006 NHSQ6T4R5 1651 aa16.32■□□□□ 0.2
LINC00940-201ENST00000418006 M0R2C6 588 aa16.31■□□□□ 0.2
LINC00940-201ENST00000418006 RIOK3O14730 519 aaKnown RBP16.31■□□□□ 0.2
LINC00940-201ENST00000418006 FGD1P98174 961 aa16.31■□□□□ 0.2
LINC00940-201ENST00000418006 LPIN2Q92539 896 aa16.31■□□□□ 0.2
LINC00940-201ENST00000418006 BCL11BQ9C0K0 894 aaPredicted RBP16.31■□□□□ 0.2
LINC00940-201ENST00000418006 WDR33Q9C0J8 1336 aaKnown RBP16.31■□□□□ 0.2
LINC00940-201ENST00000418006 ZMYM1Q5SVZ6 1142 aa16.31■□□□□ 0.2
LINC00940-201ENST00000418006 TRAPPC3LQ5T215 181 aa16.31■□□□□ 0.2
LINC00940-201ENST00000418006 KRT27Q7Z3Y8 459 aa16.31■□□□□ 0.2
LINC00940-201ENST00000418006 TMEM87AQ8NBN3 555 aa16.31■□□□□ 0.2
LINC00940-201ENST00000418006 KIAA1524Q8TCG1 905 aa16.31■□□□□ 0.2
LINC00940-201ENST00000418006 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.31■□□□□ 0.2
LINC00940-201ENST00000418006 OSBP2Q969R2 916 aa16.31■□□□□ 0.2
LINC00940-201ENST00000418006 ZSWIM6Q9HCJ5 1215 aa16.31■□□□□ 0.2
LINC00940-201ENST00000418006 MAST3O60307 1309 aa16.31■□□□□ 0.2
LINC00940-201ENST00000418006 WTIPA6NIX2 430 aaPredicted RBP16.3■□□□□ 0.2
LINC00940-201ENST00000418006 IDH1O75874 414 aaKnown RBP16.3■□□□□ 0.2
LINC00940-201ENST00000418006 SLC5A1P13866 664 aa16.3■□□□□ 0.2
LINC00940-201ENST00000418006 U2AF2P26368 475 aaKnown RBP eCLIP16.3■□□□□ 0.2
LINC00940-201ENST00000418006 CHRNDQ07001 517 aa16.3■□□□□ 0.2
LINC00940-201ENST00000418006 HELLSQ9NRZ9 838 aa16.3■□□□□ 0.2
LINC00940-201ENST00000418006 CICQ96RK0 1608 aaPredicted RBP16.3■□□□□ 0.2
LINC00940-201ENST00000418006 DDX60Q8IY21 1712 aaKnown RBP16.3■□□□□ 0.2
LINC00940-201ENST00000418006 LARGE1O95461 756 aa16.3■□□□□ 0.2
LINC00940-201ENST00000418006 CHAF1AQ13111 956 aaPredicted RBP16.3■□□□□ 0.2
LINC00940-201ENST00000418006 KCNF1Q9H3M0 494 aa16.3■□□□□ 0.2
LINC00940-201ENST00000418006 PYCARDQ9ULZ3 195 aa16.3■□□□□ 0.2
LINC00940-201ENST00000418006 IQSEC3Q9UPP2 1182 aaPredicted RBP16.3■□□□□ 0.2
LINC00940-201ENST00000418006 LIMCH1Q9UPQ0 1083 aa16.3■□□□□ 0.2
LINC00940-201ENST00000418006 A0A0G2JLW4 131 aa16.29■□□□□ 0.2
LINC00940-201ENST00000418006 CYP21A2P08686 494 aa16.29■□□□□ 0.2
LINC00940-201ENST00000418006 PSMA5P28066 241 aa16.29■□□□□ 0.2
LINC00940-201ENST00000418006 BLOC1S2Q6QNY1 142 aa16.29■□□□□ 0.2
LINC00940-201ENST00000418006 ANKRD18AQ8IVF6 992 aa16.29■□□□□ 0.2
LINC00940-201ENST00000418006 KCNB2Q92953 911 aa16.29■□□□□ 0.2
LINC00940-201ENST00000418006 CDC5LQ99459 802 aaKnown RBP16.29■□□□□ 0.2
LINC00940-201ENST00000418006 RFX7Q2KHR2 1363 aa16.29■□□□□ 0.2
LINC00940-201ENST00000418006 ABCC12Q96J65 1359 aa16.29■□□□□ 0.2
LINC00940-201ENST00000418006 BCAMP50895 628 aa16.29■□□□□ 0.2
LINC00940-201ENST00000418006 TPRNQ4KMQ1 711 aa16.29■□□□□ 0.2
LINC00940-201ENST00000418006 PUS7LQ9H0K6 701 aaKnown RBP16.29■□□□□ 0.2
LINC00940-201ENST00000418006 U3KPZ7 1027 aaPredicted RBP16.29■□□□□ 0.2
LINC00940-201ENST00000418006 SPEF2Q9C093 1822 aa16.28■□□□□ 0.2
LINC00940-201ENST00000418006 GOLGB1Q14789 3259 aaKnown RBP16.28■□□□□ 0.2
LINC00940-201ENST00000418006 RPAP1Q9BWH6 1393 aaPredicted RBP16.28■□□□□ 0.2
LINC00940-201ENST00000418006 HSPD1P10809 573 aaKnown RBP16.28■□□□□ 0.2
LINC00940-201ENST00000418006 FGFR2P21802 821 aa16.28■□□□□ 0.2
LINC00940-201ENST00000418006 PLCB2Q00722 1185 aa16.28■□□□□ 0.2
LINC00940-201ENST00000418006 SLC9C2Q5TAH2 1124 aa16.28■□□□□ 0.2
LINC00940-201ENST00000418006 CELF1Q92879 486 aaKnown RBP16.28■□□□□ 0.2
LINC00940-201ENST00000418006 PIH1D3Q9NQM4 214 aaKnown RBP16.28■□□□□ 0.2
LINC00940-201ENST00000418006 CNPY2Q9Y2B0 182 aa16.28■□□□□ 0.2
LINC00940-201ENST00000418006 BCORQ6W2J9 1755 aa16.28■□□□□ 0.2
LINC00940-201ENST00000418006 COL4A1P02462 1669 aa16.28■□□□□ 0.2
LINC00940-201ENST00000418006 CTIFO43310 598 aaKnown RBP16.28■□□□□ 0.2
LINC00940-201ENST00000418006 CCDC83Q8IWF9 413 aa16.28■□□□□ 0.2
LINC00940-201ENST00000418006 TM6SF1Q9BZW5 370 aa16.28■□□□□ 0.2
LINC00940-201ENST00000418006 TAF1P21675 1872 aa16.27■□□□□ 0.2
LINC00940-201ENST00000418006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.27■□□□□ 0.2
LINC00940-201ENST00000418006 AP5Z1O43299 807 aa16.27■□□□□ 0.2
LINC00940-201ENST00000418006 LRRFIP1Q32MZ4 808 aaKnown RBP16.27■□□□□ 0.2
LINC00940-201ENST00000418006 TPTE2Q6XPS3 522 aa16.27■□□□□ 0.2
LINC00940-201ENST00000418006 NECAB1Q8N987 351 aa16.27■□□□□ 0.2
LINC00940-201ENST00000418006 NLRP3Q96P20 1036 aa16.27■□□□□ 0.2
LINC00940-201ENST00000418006 NYXQ9GZU5 481 aa16.27■□□□□ 0.2
LINC00940-201ENST00000418006 HMG20BQ9P0W2 317 aa16.27■□□□□ 0.2
LINC00940-201ENST00000418006 SBF2Q86WG5 1849 aa16.27■□□□□ 0.2
LINC00940-201ENST00000418006 IGSF3O75054 1194 aa16.27■□□□□ 0.19
LINC00940-201ENST00000418006 TTLL5Q6EMB2 1281 aa16.27■□□□□ 0.19
LINC00940-201ENST00000418006 LRRC2Q9BYS8 371 aa16.27■□□□□ 0.19
LINC00940-201ENST00000418006 ZNF831Q5JPB2 1677 aa16.26■□□□□ 0.19
LINC00940-201ENST00000418006 STK3Q13188 491 aa16.26■□□□□ 0.19
LINC00940-201ENST00000418006 RASGRF1Q13972 1273 aa16.26■□□□□ 0.19
LINC00940-201ENST00000418006 SPATA5Q8NB90 893 aa16.26■□□□□ 0.19
LINC00940-201ENST00000418006 NEK1Q96PY6 1258 aa16.26■□□□□ 0.19
LINC00940-201ENST00000418006 FUCA2Q9BTY2 467 aa16.26■□□□□ 0.19
LINC00940-201ENST00000418006 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.26■□□□□ 0.19
LINC00940-201ENST00000418006 RPS6KB1P23443 525 aa16.26■□□□□ 0.19
LINC00940-201ENST00000418006 HAND2P61296 217 aa16.26■□□□□ 0.19
LINC00940-201ENST00000418006 UBE2HP62256 183 aa16.26■□□□□ 0.19
LINC00940-201ENST00000418006 TPCN1Q9ULQ1 816 aa16.26■□□□□ 0.19
LINC00940-201ENST00000418006 TPM3P06753 285 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms