RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 EFCC1Q9HA90 598 aa22.97■■□□□ 1.27
VCP-202ENST00000417448 CWC25Q9NXE8 425 aaPredicted RBP22.97■■□□□ 1.27
VCP-202ENST00000417448 CTSWP56202 376 aa22.96■■□□□ 1.27
VCP-202ENST00000417448 ZNF333Q96JL9 665 aa22.96■■□□□ 1.27
VCP-202ENST00000417448 CDC5LQ99459 802 aaKnown RBP22.96■■□□□ 1.27
VCP-202ENST00000417448 PTPN18Q99952 460 aa22.96■■□□□ 1.27
VCP-202ENST00000417448 BSDC1Q9NW68 430 aaPredicted RBP22.96■■□□□ 1.27
VCP-202ENST00000417448 EXOSC9Q06265 439 aaKnown RBP22.95■■□□□ 1.26
VCP-202ENST00000417448 TTLL5Q6EMB2 1281 aa22.95■■□□□ 1.26
VCP-202ENST00000417448 GREM2Q9H772 168 aa22.95■■□□□ 1.26
VCP-202ENST00000417448 PCDHAC2Q9Y5I4 1007 aa22.95■■□□□ 1.26
VCP-202ENST00000417448 MMP14P50281 582 aa22.94■■□□□ 1.26
VCP-202ENST00000417448 ZSWIM8A7E2V4 1837 aa22.94■■□□□ 1.26
VCP-202ENST00000417448 HNRNPUQ00839 825 aaKnown RBP eCLIP22.93■■□□□ 1.26
VCP-202ENST00000417448 SP3Q02447 781 aa22.93■■□□□ 1.26
VCP-202ENST00000417448 TTLL11Q8NHH1 800 aa22.93■■□□□ 1.26
VCP-202ENST00000417448 GTF2IP78347 998 aa22.92■■□□□ 1.26
VCP-202ENST00000417448 OTUD5Q96G74 571 aa22.92■■□□□ 1.26
VCP-202ENST00000417448 METTL22Q9BUU2 404 aaPredicted RBP22.92■■□□□ 1.26
VCP-202ENST00000417448 AOX1Q06278 1338 aa22.91■■□□□ 1.26
VCP-202ENST00000417448 H0YGN5 161 aa22.91■■□□□ 1.26
VCP-202ENST00000417448 TWISTNBQ3B726 338 aaPredicted RBP22.91■■□□□ 1.26
VCP-202ENST00000417448 TMEM106CQ9BVX2 250 aa22.91■■□□□ 1.26
VCP-202ENST00000417448 TESPA1A2RU30 521 aaPredicted RBP22.9■■□□□ 1.26
VCP-202ENST00000417448 PPP1R12BO60237 982 aaPredicted RBP22.9■■□□□ 1.26
VCP-202ENST00000417448 CERS5Q8N5B7 392 aa22.9■■□□□ 1.26
VCP-202ENST00000417448 MYH16Q9H6N6 1097 aa22.9■■□□□ 1.26
VCP-202ENST00000417448 PTCH2Q9Y6C5 1203 aa22.9■■□□□ 1.26
VCP-202ENST00000417448 A0A1B0GUL6 1792 aa22.89■■□□□ 1.26
VCP-202ENST00000417448 ZNF804BA4D1E1 1349 aa22.89■■□□□ 1.26
VCP-202ENST00000417448 NBPF12Q5TAG4 269 aaPredicted RBP22.89■■□□□ 1.25
VCP-202ENST00000417448 LEMD3Q9Y2U8 911 aa22.89■■□□□ 1.25
VCP-202ENST00000417448 PPP2R3BQ9Y5P8 575 aa22.89■■□□□ 1.25
VCP-202ENST00000417448 UNCXA6NJT0 531 aa22.88■■□□□ 1.25
VCP-202ENST00000417448 USP2O75604 605 aaPredicted RBP22.88■■□□□ 1.25
VCP-202ENST00000417448 IGKV5-2P06315 115 aa22.88■■□□□ 1.25
VCP-202ENST00000417448 SLFN5Q08AF3 891 aa22.88■■□□□ 1.25
VCP-202ENST00000417448 DLGAP5Q15398 846 aa22.88■■□□□ 1.25
VCP-202ENST00000417448 OTUD7BQ6GQQ9 843 aa22.88■■□□□ 1.25
VCP-202ENST00000417448 MTMR14Q8NCE2 650 aa22.88■■□□□ 1.25
VCP-202ENST00000417448 COL6A3P12111 3177 aa22.88■■□□□ 1.25
VCP-202ENST00000417448 CLRN2A0PK11 232 aa22.87■■□□□ 1.25
VCP-202ENST00000417448 VAMP4O75379 141 aa22.87■■□□□ 1.25
VCP-202ENST00000417448 SLC9C1Q4G0N8 1177 aa22.87■■□□□ 1.25
VCP-202ENST00000417448 MYCP01106 439 aaPredicted RBP22.86■■□□□ 1.25
VCP-202ENST00000417448 MS4A4AQ96JQ5 239 aa22.86■■□□□ 1.25
VCP-202ENST00000417448 MAP3K2Q9Y2U5 619 aa22.86■■□□□ 1.25
VCP-202ENST00000417448 IRS2Q9Y4H2 1338 aa22.85■■□□□ 1.25
VCP-202ENST00000417448 IREB2P48200 963 aaKnown RBP22.85■■□□□ 1.25
VCP-202ENST00000417448 SUPT20HL1Q3ZLR7 823 aa22.85■■□□□ 1.25
VCP-202ENST00000417448 PRMT6Q96LA8 375 aaPredicted RBP22.85■■□□□ 1.25
VCP-202ENST00000417448 SPDYE2BA6NHP3 402 aa22.84■■□□□ 1.25
VCP-202ENST00000417448 E9PSI1 815 aa22.84■■□□□ 1.25
VCP-202ENST00000417448 SPDYE6P0CI01 402 aa22.84■■□□□ 1.25
VCP-202ENST00000417448 SLC4A8Q2Y0W8 1093 aa22.84■■□□□ 1.25
VCP-202ENST00000417448 CCDC30Q5VVM6 783 aa22.84■■□□□ 1.25
VCP-202ENST00000417448 CHRDL2Q6WN34 429 aa22.84■■□□□ 1.25
VCP-202ENST00000417448 ANKRD13AQ8IZ07 590 aa22.84■■□□□ 1.25
VCP-202ENST00000417448 ELP3Q9H9T3 547 aa22.84■■□□□ 1.25
VCP-202ENST00000417448 VEZTQ9HBM0 779 aa22.84■■□□□ 1.25
VCP-202ENST00000417448 CD209Q9NNX6 404 aa22.84■■□□□ 1.25
VCP-202ENST00000417448 A0A0C4DFX4 3053 aa22.83■■□□□ 1.25
VCP-202ENST00000417448 F8W031 263 aaPredicted RBP22.83■■□□□ 1.25
VCP-202ENST00000417448 SNAP23O00161 211 aa22.83■■□□□ 1.25
VCP-202ENST00000417448 CFAP100Q494V2 611 aa22.83■■□□□ 1.25
VCP-202ENST00000417448 G2E3Q7L622 706 aa22.83■■□□□ 1.25
VCP-202ENST00000417448 NBPF11Q86T75 865 aa22.83■■□□□ 1.25
VCP-202ENST00000417448 CNKSR2Q8WXI2 1034 aa22.83■■□□□ 1.25
VCP-202ENST00000417448 OPTNQ96CV9 577 aa22.83■■□□□ 1.25
VCP-202ENST00000417448 LAMA3Q16787 3333 aa22.83■■□□□ 1.24
VCP-202ENST00000417448 CACNA1FO60840 1977 aa22.82■■□□□ 1.24
VCP-202ENST00000417448 IGHMBP2P38935 993 aaKnown RBP22.82■■□□□ 1.24
VCP-202ENST00000417448 CWF19L2Q2TBE0 894 aaKnown RBP22.82■■□□□ 1.24
VCP-202ENST00000417448 SH3TC2Q8TF17 1288 aa22.82■■□□□ 1.24
VCP-202ENST00000417448 BRI3BPQ8WY22 251 aa22.82■■□□□ 1.24
VCP-202ENST00000417448 RBM27Q9P2N5 1060 aaKnown RBP22.82■■□□□ 1.24
VCP-202ENST00000417448 DDX58O95786 925 aaKnown RBP22.81■■□□□ 1.24
VCP-202ENST00000417448 RASA3Q14644 834 aa22.81■■□□□ 1.24
VCP-202ENST00000417448 CDAN1Q8IWY9 1227 aa22.81■■□□□ 1.24
VCP-202ENST00000417448 ANKRD2Q9GZV1 360 aa22.81■■□□□ 1.24
VCP-202ENST00000417448 ARAP2Q8WZ64 1704 aa22.8■■□□□ 1.24
VCP-202ENST00000417448 SLC4A2P04920 1241 aa22.8■■□□□ 1.24
VCP-202ENST00000417448 ITGA6P23229 1130 aa22.8■■□□□ 1.24
VCP-202ENST00000417448 TAF1CQ15572 869 aaPredicted RBP22.8■■□□□ 1.24
VCP-202ENST00000417448 TRMT2AQ8IZ69 625 aaKnown RBP22.8■■□□□ 1.24
VCP-202ENST00000417448 FAM43AQ8N2R8 423 aa22.8■■□□□ 1.24
VCP-202ENST00000417448 ARHGAP39Q9C0H5 1083 aa22.8■■□□□ 1.24
VCP-202ENST00000417448 PI4KAP2A4QPH2 592 aa22.79■■□□□ 1.24
VCP-202ENST00000417448 MYO1BO43795 1136 aa22.79■■□□□ 1.24
VCP-202ENST00000417448 CHRNDQ07001 517 aa22.79■■□□□ 1.24
VCP-202ENST00000417448 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.79■■□□□ 1.24
VCP-202ENST00000417448 UBE3BQ7Z3V4 1068 aa22.79■■□□□ 1.24
VCP-202ENST00000417448 PI4KAP1Q8N8J0 262 aa22.79■■□□□ 1.24
VCP-202ENST00000417448 SHISA4Q96DD7 197 aa22.79■■□□□ 1.24
VCP-202ENST00000417448 JAG2Q9Y219 1238 aa22.79■■□□□ 1.24
VCP-202ENST00000417448 CCL15-CCL14A0A0B4J2E2 113 aa22.78■■□□□ 1.24
VCP-202ENST00000417448 DLL1O00548 723 aa22.78■■□□□ 1.24
VCP-202ENST00000417448 CCL15Q16663 113 aa22.78■■□□□ 1.24
VCP-202ENST00000417448 KSR2Q6VAB6 950 aa22.78■■□□□ 1.24
VCP-202ENST00000417448 STK31Q9BXU1 1019 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms