RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 SCARF1Q14162 830 aa13.68□□□□□ -0.22
TM9SF4-203ENST00000417389 MFSD14BQ5SR56 506 aa13.68□□□□□ -0.22
TM9SF4-203ENST00000417389 GORABQ5T7V8 394 aa13.68□□□□□ -0.22
TM9SF4-203ENST00000417389 KRT26Q7Z3Y9 468 aa13.68□□□□□ -0.22
TM9SF4-203ENST00000417389 USP48Q86UV5 1035 aa13.68□□□□□ -0.22
TM9SF4-203ENST00000417389 SULF1Q8IWU6 871 aa13.68□□□□□ -0.22
TM9SF4-203ENST00000417389 TDRD7Q8NHU6 1098 aaKnown RBP13.68□□□□□ -0.22
TM9SF4-203ENST00000417389 NEUROD6Q96NK8 337 aa13.68□□□□□ -0.22
TM9SF4-203ENST00000417389 BCL11AQ9H165 835 aa13.68□□□□□ -0.22
TM9SF4-203ENST00000417389 GNL3LQ9NVN8 582 aaKnown RBP13.68□□□□□ -0.22
TM9SF4-203ENST00000417389 GGA3Q9NZ52 723 aa13.68□□□□□ -0.22
TM9SF4-203ENST00000417389 ABT1Q9ULW3 272 aaKnown RBP13.68□□□□□ -0.22
TM9SF4-203ENST00000417389 AKAP2Q9Y2D5 859 aa13.68□□□□□ -0.22
TM9SF4-203ENST00000417389 TMEM88BA6NKF7 163 aa13.67□□□□□ -0.22
TM9SF4-203ENST00000417389 ITGBL1O95965 494 aaPredicted RBP13.67□□□□□ -0.22
TM9SF4-203ENST00000417389 FGFR2P21802 821 aa13.67□□□□□ -0.22
TM9SF4-203ENST00000417389 PAXIP1Q6ZW49 1069 aaPredicted RBP13.67□□□□□ -0.22
TM9SF4-203ENST00000417389 CDC37L1Q7L3B6 337 aa13.67□□□□□ -0.22
TM9SF4-203ENST00000417389 FBXO33Q7Z6M2 555 aa13.67□□□□□ -0.22
TM9SF4-203ENST00000417389 GMLQ99445 158 aa13.67□□□□□ -0.22
TM9SF4-203ENST00000417389 TIMM10P62072 90 aa13.66□□□□□ -0.22
TM9SF4-203ENST00000417389 FMR1Q06787 632 aaKnown RBP eCLIP13.66□□□□□ -0.22
TM9SF4-203ENST00000417389 PDE3AQ14432 1141 aa13.66□□□□□ -0.22
TM9SF4-203ENST00000417389 DLGAP5Q15398 846 aa13.66□□□□□ -0.22
TM9SF4-203ENST00000417389 C20orf194Q5TEA3 1177 aa13.66□□□□□ -0.22
TM9SF4-203ENST00000417389 ANGEL2Q5VTE6 544 aaKnown RBP13.66□□□□□ -0.22
TM9SF4-203ENST00000417389 CERS5Q8N5B7 392 aa13.66□□□□□ -0.22
TM9SF4-203ENST00000417389 CREBZFQ9NS37 354 aa13.66□□□□□ -0.22
TM9SF4-203ENST00000417389 ASTN2O75129 1339 aaPredicted RBP13.65□□□□□ -0.22
TM9SF4-203ENST00000417389 PASKQ96RG2 1323 aa13.65□□□□□ -0.22
TM9SF4-203ENST00000417389 A0A1B0GUL7 405 aa13.65□□□□□ -0.22
TM9SF4-203ENST00000417389 ADM5C9JUS6 153 aa13.65□□□□□ -0.22
TM9SF4-203ENST00000417389 CELF2O95319 508 aaKnown RBP13.65□□□□□ -0.22
TM9SF4-203ENST00000417389 NBPF9Q3BBW0 867 aa13.65□□□□□ -0.22
TM9SF4-203ENST00000417389 CEP85Q6P2H3 762 aa13.65□□□□□ -0.22
TM9SF4-203ENST00000417389 TBC1D22AQ8WUA7 517 aa13.65□□□□□ -0.22
TM9SF4-203ENST00000417389 MKRN1Q9UHC7 482 aaKnown RBP13.65□□□□□ -0.22
TM9SF4-203ENST00000417389 TTF2Q9UNY4 1162 aaKnown RBP13.65□□□□□ -0.22
TM9SF4-203ENST00000417389 ADAMTSL1Q8N6G6 1762 aa13.65□□□□□ -0.22
TM9SF4-203ENST00000417389 FAM205AQ6ZU69 1335 aa13.64□□□□□ -0.23
TM9SF4-203ENST00000417389 ZNF609O15014 1411 aa13.64□□□□□ -0.23
TM9SF4-203ENST00000417389 APBB1O00213 710 aa13.64□□□□□ -0.23
TM9SF4-203ENST00000417389 MYO1BO43795 1136 aa13.64□□□□□ -0.23
TM9SF4-203ENST00000417389 HMMRO75330 724 aa13.64□□□□□ -0.23
TM9SF4-203ENST00000417389 ADORA1P30542 326 aa13.64□□□□□ -0.23
TM9SF4-203ENST00000417389 MMP14P50281 582 aa13.64□□□□□ -0.23
TM9SF4-203ENST00000417389 FKBP1AP62942 108 aaKnown RBP13.64□□□□□ -0.23
TM9SF4-203ENST00000417389 GRM1Q13255 1194 aa13.64□□□□□ -0.23
TM9SF4-203ENST00000417389 POLA2Q14181 598 aa13.64□□□□□ -0.23
TM9SF4-203ENST00000417389 SSH3Q8TE77 659 aa13.64□□□□□ -0.23
TM9SF4-203ENST00000417389 PGAP2Q9UHJ9 254 aa13.64□□□□□ -0.23
TM9SF4-203ENST00000417389 PSME4Q14997 1843 aa13.64□□□□□ -0.23
TM9SF4-203ENST00000417389 WNT10BO00744 389 aa13.63□□□□□ -0.23
TM9SF4-203ENST00000417389 PHKA1P46020 1223 aa13.63□□□□□ -0.23
TM9SF4-203ENST00000417389 CFAP100Q494V2 611 aa13.63□□□□□ -0.23
TM9SF4-203ENST00000417389 XAGE2Q96GT9 111 aa13.63□□□□□ -0.23
TM9SF4-203ENST00000417389 SCAF8Q9UPN6 1271 aaKnown RBP13.63□□□□□ -0.23
TM9SF4-203ENST00000417389 RRP1P56182 461 aaKnown RBP13.62□□□□□ -0.23
TM9SF4-203ENST00000417389 CCDC102BQ68D86 513 aa13.62□□□□□ -0.23
TM9SF4-203ENST00000417389 DLK2Q6UY11 383 aa13.62□□□□□ -0.23
TM9SF4-203ENST00000417389 WDR66Q8TBY9 1149 aa13.62□□□□□ -0.23
TM9SF4-203ENST00000417389 KLRG1Q96E93 195 aa13.62□□□□□ -0.23
TM9SF4-203ENST00000417389 VEZTQ9HBM0 779 aa13.62□□□□□ -0.23
TM9SF4-203ENST00000417389 ZBTB40Q9NUA8 1239 aa13.62□□□□□ -0.23
TM9SF4-203ENST00000417389 DENND2AQ9ULE3 1009 aa13.62□□□□□ -0.23
TM9SF4-203ENST00000417389 EXOC6BQ9Y2D4 811 aa13.62□□□□□ -0.23
TM9SF4-203ENST00000417389 CLRN2A0PK11 232 aa13.61□□□□□ -0.23
TM9SF4-203ENST00000417389 HSP90AB4PQ58FF6 505 aa13.61□□□□□ -0.23
TM9SF4-203ENST00000417389 ERC1Q8IUD2 1116 aa13.61□□□□□ -0.23
TM9SF4-203ENST00000417389 RPAP2Q8IXW5 612 aaPredicted RBP13.61□□□□□ -0.23
TM9SF4-203ENST00000417389 MAST3O60307 1309 aa13.61□□□□□ -0.23
TM9SF4-203ENST00000417389 CEP350Q5VT06 3117 aa13.6□□□□□ -0.23
TM9SF4-203ENST00000417389 SEMA3EO15041 775 aa13.6□□□□□ -0.23
TM9SF4-203ENST00000417389 CRKP46108 304 aa13.6□□□□□ -0.23
TM9SF4-203ENST00000417389 TTLL12Q14166 644 aaPredicted RBP13.6□□□□□ -0.23
TM9SF4-203ENST00000417389 CCDC158Q5M9N0 1113 aa13.6□□□□□ -0.23
TM9SF4-203ENST00000417389 TTC39AQ5SRH9 613 aa13.6□□□□□ -0.23
TM9SF4-203ENST00000417389 APOBEC3FQ8IUX4 373 aaKnown RBP13.6□□□□□ -0.23
TM9SF4-203ENST00000417389 C2orf69Q8N8R5 385 aa13.6□□□□□ -0.23
TM9SF4-203ENST00000417389 TEKT1Q969V4 418 aa13.6□□□□□ -0.23
TM9SF4-203ENST00000417389 CDCA5Q96FF9 252 aa13.6□□□□□ -0.23
TM9SF4-203ENST00000417389 ABCF2Q9UG63 623 aa13.6□□□□□ -0.23
TM9SF4-203ENST00000417389 PCDHAC2Q9Y5I4 1007 aa13.6□□□□□ -0.23
TM9SF4-203ENST00000417389 PITPNM2Q9BZ72 1349 aa13.6□□□□□ -0.23
TM9SF4-203ENST00000417389 SPDYE2BA6NHP3 402 aa13.59□□□□□ -0.23
TM9SF4-203ENST00000417389 LDHBP07195 334 aaKnown RBP13.59□□□□□ -0.23
TM9SF4-203ENST00000417389 SPDYE6P0CI01 402 aa13.59□□□□□ -0.23
TM9SF4-203ENST00000417389 NF2P35240 595 aa13.59□□□□□ -0.23
TM9SF4-203ENST00000417389 GRIK5Q16478 980 aa13.59□□□□□ -0.23
TM9SF4-203ENST00000417389 DEFB115Q30KQ5 88 aa13.59□□□□□ -0.23
TM9SF4-203ENST00000417389 TNNI3KQ59H18 835 aa13.59□□□□□ -0.23
TM9SF4-203ENST00000417389 PRAMEF18Q5VWM3 479 aa13.59□□□□□ -0.23
TM9SF4-203ENST00000417389 CST9Q5W186 159 aa13.59□□□□□ -0.23
TM9SF4-203ENST00000417389 DNAJC5GQ8N7S2 189 aa13.59□□□□□ -0.23
TM9SF4-203ENST00000417389 PRMT6Q96LA8 375 aaPredicted RBP13.59□□□□□ -0.23
TM9SF4-203ENST00000417389 SERPINA10Q9UK55 444 aa13.59□□□□□ -0.23
TM9SF4-203ENST00000417389 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.59□□□□□ -0.23
TM9SF4-203ENST00000417389 FPGT-TNNI3KV9GXZ4 949 aa13.59□□□□□ -0.23
TM9SF4-203ENST00000417389 UQCRFS1P1P0C7P4 283 aa13.58□□□□□ -0.24
TM9SF4-203ENST00000417389 RASGRF1Q13972 1273 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms