RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 LRRC37AA6NMS7 1700 aa13.78□□□□□ -0.2
RFFL-205ENST00000415395 HOXA10P31260 410 aaPredicted RBP13.78□□□□□ -0.2
RFFL-205ENST00000415395 ZAP70P43403 619 aa13.78□□□□□ -0.2
RFFL-205ENST00000415395 EN1Q05925 392 aaPredicted RBP13.78□□□□□ -0.2
RFFL-205ENST00000415395 SCARF1Q14162 830 aa13.78□□□□□ -0.2
RFFL-205ENST00000415395 TMC4Q7Z404 712 aa13.78□□□□□ -0.2
RFFL-205ENST00000415395 KCNB2Q92953 911 aa13.78□□□□□ -0.2
RFFL-205ENST00000415395 GNL3LQ9NVN8 582 aaKnown RBP13.78□□□□□ -0.2
RFFL-205ENST00000415395 MCM5P33992 734 aa13.77□□□□□ -0.21
RFFL-205ENST00000415395 CCDC24Q8N4L8 307 aa13.77□□□□□ -0.21
RFFL-205ENST00000415395 CRAMP1Q96RY5 1269 aa13.77□□□□□ -0.21
RFFL-205ENST00000415395 BRIP1Q9BX63 1249 aa13.77□□□□□ -0.21
RFFL-205ENST00000415395 MYO5AQ9Y4I1 1855 aaKnown RBP13.77□□□□□ -0.21
RFFL-205ENST00000415395 SEMA3EO15041 775 aa13.76□□□□□ -0.21
RFFL-205ENST00000415395 CAVIN4Q5BKX8 364 aa13.76□□□□□ -0.21
RFFL-205ENST00000415395 CCDC125Q86Z20 511 aa13.76□□□□□ -0.21
RFFL-205ENST00000415395 SPATA5Q8NB90 893 aa13.76□□□□□ -0.21
RFFL-205ENST00000415395 PARP3Q9Y6F1 533 aa13.76□□□□□ -0.21
RFFL-205ENST00000415395 PDS5AQ29RF7 1337 aaKnown RBP13.76□□□□□ -0.21
RFFL-205ENST00000415395 BBOX1O75936 387 aa13.76□□□□□ -0.21
RFFL-205ENST00000415395 PTH1RQ03431 593 aa13.76□□□□□ -0.21
RFFL-205ENST00000415395 HSP90AA2PQ14568 343 aaPredicted RBP13.76□□□□□ -0.21
RFFL-205ENST00000415395 NECTIN1Q15223 517 aa13.76□□□□□ -0.21
RFFL-205ENST00000415395 RNF20Q5VTR2 975 aa13.76□□□□□ -0.21
RFFL-205ENST00000415395 HMG20BQ9P0W2 317 aa13.76□□□□□ -0.21
RFFL-205ENST00000415395 LEMD3Q9Y2U8 911 aa13.76□□□□□ -0.21
RFFL-205ENST00000415395 PRPF40AO75400 957 aaKnown RBP13.75□□□□□ -0.21
RFFL-205ENST00000415395 ZKSCAN1P17029 563 aaPredicted RBP13.75□□□□□ -0.21
RFFL-205ENST00000415395 KCNJ4P48050 445 aa13.75□□□□□ -0.21
RFFL-205ENST00000415395 NEK4P51957 841 aa13.75□□□□□ -0.21
RFFL-205ENST00000415395 RASGRF1Q13972 1273 aa13.75□□□□□ -0.21
RFFL-205ENST00000415395 CSPP1Q1MSJ5 1256 aa13.75□□□□□ -0.21
RFFL-205ENST00000415395 LRSAM1Q6UWE0 723 aa13.75□□□□□ -0.21
RFFL-205ENST00000415395 ZNF589Q86UQ0 364 aaPredicted RBP13.75□□□□□ -0.21
RFFL-205ENST00000415395 KLHL34Q8N239 644 aa13.75□□□□□ -0.21
RFFL-205ENST00000415395 APPBP2Q92624 585 aa13.75□□□□□ -0.21
RFFL-205ENST00000415395 DSCC1Q9BVC3 393 aa13.75□□□□□ -0.21
RFFL-205ENST00000415395 PALD1Q9ULE6 856 aa13.75□□□□□ -0.21
RFFL-205ENST00000415395 RBM8AQ9Y5S9 174 aaKnown RBP13.75□□□□□ -0.21
RFFL-205ENST00000415395 XDHP47989 1333 aa13.74□□□□□ -0.21
RFFL-205ENST00000415395 IGSF3O75054 1194 aa13.74□□□□□ -0.21
RFFL-205ENST00000415395 MMP10P09238 476 aa13.74□□□□□ -0.21
RFFL-205ENST00000415395 PDE6BP35913 854 aa13.74□□□□□ -0.21
RFFL-205ENST00000415395 BCAMP50895 628 aa13.74□□□□□ -0.21
RFFL-205ENST00000415395 CUL4AQ13619 759 aa13.74□□□□□ -0.21
RFFL-205ENST00000415395 UBE3CQ15386 1083 aa13.74□□□□□ -0.21
RFFL-205ENST00000415395 C15orf52Q6ZUT6 534 aaKnown RBP13.74□□□□□ -0.21
RFFL-205ENST00000415395 FBXO33Q7Z6M2 555 aa13.74□□□□□ -0.21
RFFL-205ENST00000415395 TM6SF1Q9BZW5 370 aa13.74□□□□□ -0.21
RFFL-205ENST00000415395 SNX14Q9Y5W7 946 aa13.74□□□□□ -0.21
RFFL-205ENST00000415395 U3KPZ7 1027 aaPredicted RBP13.74□□□□□ -0.21
RFFL-205ENST00000415395 MAST3O60307 1309 aa13.73□□□□□ -0.21
RFFL-205ENST00000415395 SNAP23O00161 211 aa13.73□□□□□ -0.21
RFFL-205ENST00000415395 OFD1O75665 1012 aa13.73□□□□□ -0.21
RFFL-205ENST00000415395 ADD2P35612 726 aa13.73□□□□□ -0.21
RFFL-205ENST00000415395 TSGA10IPQ3SY00 556 aa13.73□□□□□ -0.21
RFFL-205ENST00000415395 PI16Q6UXB8 463 aa13.73□□□□□ -0.21
RFFL-205ENST00000415395 CCDC39Q9UFE4 941 aa13.73□□□□□ -0.21
RFFL-205ENST00000415395 DENND2AQ9ULE3 1009 aa13.73□□□□□ -0.21
RFFL-205ENST00000415395 COL11A2P13942 1736 aaPredicted RBP13.73□□□□□ -0.21
RFFL-205ENST00000415395 LTBP1Q14766 1721 aa13.73□□□□□ -0.21
RFFL-205ENST00000415395 NPR1P16066 1061 aa13.73□□□□□ -0.21
RFFL-205ENST00000415395 MAP3K12Q12852 859 aa13.73□□□□□ -0.21
RFFL-205ENST00000415395 CREB3L3Q68CJ9 461 aa13.73□□□□□ -0.21
RFFL-205ENST00000415395 TMED8Q6PL24 325 aaPredicted RBP13.73□□□□□ -0.21
RFFL-205ENST00000415395 VPS37DQ86XT2 251 aa13.73□□□□□ -0.21
RFFL-205ENST00000415395 TMX3Q96JJ7 454 aa13.73□□□□□ -0.21
RFFL-205ENST00000415395 PDLIM2Q96JY6 352 aa13.73□□□□□ -0.21
RFFL-205ENST00000415395 DUOX1Q9NRD9 1551 aa13.72□□□□□ -0.21
RFFL-205ENST00000415395 IRS2Q9Y4H2 1338 aa13.72□□□□□ -0.21
RFFL-205ENST00000415395 PRPF40BQ6NWY9 871 aaKnown RBP13.72□□□□□ -0.21
RFFL-205ENST00000415395 ZGPATQ8N5A5 531 aaKnown RBP13.72□□□□□ -0.21
RFFL-205ENST00000415395 FAM84BQ96KN1 310 aaPredicted RBP13.72□□□□□ -0.21
RFFL-205ENST00000415395 SEC62Q99442 399 aaKnown RBP13.72□□□□□ -0.21
RFFL-205ENST00000415395 PIH1D3Q9NQM4 214 aaKnown RBP13.72□□□□□ -0.21
RFFL-205ENST00000415395 PODXL2Q9NZ53 605 aa13.72□□□□□ -0.21
RFFL-205ENST00000415395 NOL7Q9UMY1 257 aaKnown RBP13.72□□□□□ -0.21
RFFL-205ENST00000415395 MAST2Q6P0Q8 1798 aa13.71□□□□□ -0.21
RFFL-205ENST00000415395 WDR33Q9C0J8 1336 aaKnown RBP13.71□□□□□ -0.21
RFFL-205ENST00000415395 SLC27A2O14975 620 aa13.71□□□□□ -0.21
RFFL-205ENST00000415395 BRD1O95696 1058 aa13.71□□□□□ -0.21
RFFL-205ENST00000415395 SRGNP10124 158 aa13.71□□□□□ -0.21
RFFL-205ENST00000415395 ATP2B4P23634 1241 aa13.71□□□□□ -0.21
RFFL-205ENST00000415395 ALDH1B1P30837 517 aa13.71□□□□□ -0.21
RFFL-205ENST00000415395 KRT32Q14532 448 aa13.71□□□□□ -0.21
RFFL-205ENST00000415395 WASHC4Q2M389 1173 aa13.71□□□□□ -0.21
RFFL-205ENST00000415395 SLC9C2Q5TAH2 1124 aa13.71□□□□□ -0.21
RFFL-205ENST00000415395 OSBP2Q969R2 916 aa13.71□□□□□ -0.21
RFFL-205ENST00000415395 ANKIB1Q9P2G1 1089 aa13.71□□□□□ -0.21
RFFL-205ENST00000415395 KIAA1551Q9HCM1 1747 aa13.71□□□□□ -0.22
RFFL-205ENST00000415395 CCDC88AQ3V6T2 1871 aa13.71□□□□□ -0.22
RFFL-205ENST00000415395 ZNF500O60304 480 aaPredicted RBP13.7□□□□□ -0.22
RFFL-205ENST00000415395 IDH1O75874 414 aaKnown RBP13.7□□□□□ -0.22
RFFL-205ENST00000415395 PDE6AP16499 860 aa13.7□□□□□ -0.22
RFFL-205ENST00000415395 PSMA5P28066 241 aa13.7□□□□□ -0.22
RFFL-205ENST00000415395 HIBADHP31937 336 aaKnown RBP13.7□□□□□ -0.22
RFFL-205ENST00000415395 GYG1P46976 350 aa13.7□□□□□ -0.22
RFFL-205ENST00000415395 RASEFQ8IZ41 740 aa13.7□□□□□ -0.22
RFFL-205ENST00000415395 SLC16A10Q8TF71 515 aa13.7□□□□□ -0.22
RFFL-205ENST00000415395 RPAP1Q9BWH6 1393 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms