RNA–Protein interactions for RNA: ENST00000414044.1

VTA1P1-201, Transcript of vesicle trafficking 1 pseudogene 1, humanhuman

BASIC

Gene VTA1P1, Length 866 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1P1-201ENST00000414044 NSUN5Q96P11 429 aaKnown RBP7.34□□□□□ -1.23
VTA1P1-201ENST00000414044 TANGO6Q9C0B7 1094 aa7.34□□□□□ -1.23
VTA1P1-201ENST00000414044 CAPN10Q9HC96 672 aa7.34□□□□□ -1.23
VTA1P1-201ENST00000414044 SRA1Q9HD15 236 aaKnown RBP7.34□□□□□ -1.23
VTA1P1-201ENST00000414044 FOXD3Q9UJU5 478 aaPredicted RBP7.34□□□□□ -1.23
VTA1P1-201ENST00000414044 GIPC1O14908 333 aa7.33□□□□□ -1.24
VTA1P1-201ENST00000414044 TNFRSF21O75509 655 aa7.33□□□□□ -1.24
VTA1P1-201ENST00000414044 TRIP4Q15650 581 aaPredicted RBP7.33□□□□□ -1.24
VTA1P1-201ENST00000414044 GRIK5Q16478 980 aa7.33□□□□□ -1.24
VTA1P1-201ENST00000414044 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.33□□□□□ -1.24
VTA1P1-201ENST00000414044 PDE12Q6L8Q7 609 aaKnown RBP7.33□□□□□ -1.24
VTA1P1-201ENST00000414044 HFE2Q6ZVN8 426 aa7.33□□□□□ -1.24
VTA1P1-201ENST00000414044 MAP4K3Q8IVH8 894 aa7.33□□□□□ -1.24
VTA1P1-201ENST00000414044 SLC43A3Q8NBI5 491 aa7.33□□□□□ -1.24
VTA1P1-201ENST00000414044 SPACA7Q96KW9 195 aa7.33□□□□□ -1.24
VTA1P1-201ENST00000414044 ACBD3Q9H3P7 528 aa7.33□□□□□ -1.24
VTA1P1-201ENST00000414044 C12orf49Q9H741 205 aa7.33□□□□□ -1.24
VTA1P1-201ENST00000414044 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.33□□□□□ -1.24
VTA1P1-201ENST00000414044 DYRK3O43781 588 aa7.32□□□□□ -1.24
VTA1P1-201ENST00000414044 H2AFB1P0C5Y9 115 aa7.32□□□□□ -1.24
VTA1P1-201ENST00000414044 H2AFB2P0C5Z0 115 aa7.32□□□□□ -1.24
VTA1P1-201ENST00000414044 TTC39BQ5VTQ0 682 aaPredicted RBP7.32□□□□□ -1.24
VTA1P1-201ENST00000414044 USPL1Q5W0Q7 1092 aa7.32□□□□□ -1.24
VTA1P1-201ENST00000414044 ZNF438Q7Z4V0 828 aa7.32□□□□□ -1.24
VTA1P1-201ENST00000414044 FAM177A1Q8N128 213 aaPredicted RBP7.32□□□□□ -1.24
VTA1P1-201ENST00000414044 CCDC74AQ96AQ1 378 aa7.32□□□□□ -1.24
VTA1P1-201ENST00000414044 MUC3BQ9H195 1237 aa7.32□□□□□ -1.24
VTA1P1-201ENST00000414044 PTPN12Q05209 780 aaKnown RBP7.31□□□□□ -1.24
VTA1P1-201ENST00000414044 HYAL2Q12891 473 aa7.31□□□□□ -1.24
VTA1P1-201ENST00000414044 GNL2Q13823 731 aaKnown RBP7.31□□□□□ -1.24
VTA1P1-201ENST00000414044 IGF2-ASQ6U949 168 aa7.31□□□□□ -1.24
VTA1P1-201ENST00000414044 SHISA2Q6UWI4 295 aa7.31□□□□□ -1.24
VTA1P1-201ENST00000414044 PI16Q6UXB8 463 aa7.31□□□□□ -1.24
VTA1P1-201ENST00000414044 NLRP2Q9NX02 1062 aa7.31□□□□□ -1.24
VTA1P1-201ENST00000414044 J3QW42 95 aa7.3□□□□□ -1.24
VTA1P1-201ENST00000414044 PHACTR2O75167 634 aa7.3□□□□□ -1.24
VTA1P1-201ENST00000414044 TNNI2P48788 182 aa7.3□□□□□ -1.24
VTA1P1-201ENST00000414044 ZMYM1Q5SVZ6 1142 aa7.3□□□□□ -1.24
VTA1P1-201ENST00000414044 GDF6Q6KF10 455 aaPredicted RBP7.3□□□□□ -1.24
VTA1P1-201ENST00000414044 HS2ST1Q7LGA3 356 aa7.3□□□□□ -1.24
VTA1P1-201ENST00000414044 OR13H1Q8NG92 308 aa7.3□□□□□ -1.24
VTA1P1-201ENST00000414044 EPS8L3Q8TE67 593 aaKnown RBP7.3□□□□□ -1.24
VTA1P1-201ENST00000414044 OSBPL7Q9BZF2 842 aa7.3□□□□□ -1.24
VTA1P1-201ENST00000414044 ZFYVE28Q9HCC9 887 aa7.3□□□□□ -1.24
VTA1P1-201ENST00000414044 PRKAG2Q9UGJ0 569 aa7.3□□□□□ -1.24
VTA1P1-201ENST00000414044 DDX41Q9UJV9 622 aaKnown RBP7.3□□□□□ -1.24
VTA1P1-201ENST00000414044 FAM177BA6PVY3 158 aa7.29□□□□□ -1.24
VTA1P1-201ENST00000414044 SMNDC1O75940 238 aaKnown RBP eCLIP7.29□□□□□ -1.24
VTA1P1-201ENST00000414044 ZNF394Q53GI3 561 aa7.29□□□□□ -1.24
VTA1P1-201ENST00000414044 USP48Q86UV5 1035 aa7.29□□□□□ -1.24
VTA1P1-201ENST00000414044 ZNF654Q8IZM8 581 aa7.29□□□□□ -1.24
VTA1P1-201ENST00000414044 IL22RA1Q8N6P7 574 aa7.29□□□□□ -1.24
VTA1P1-201ENST00000414044 SRCIN1Q9C0H9 1055 aa7.29□□□□□ -1.24
VTA1P1-201ENST00000414044 ELP3Q9H9T3 547 aa7.29□□□□□ -1.24
VTA1P1-201ENST00000414044 FAM8A1Q9UBU6 413 aa7.29□□□□□ -1.24
VTA1P1-201ENST00000414044 PCDHGB7Q9Y5F8 929 aa7.29□□□□□ -1.24
VTA1P1-201ENST00000414044 TP53INP1Q96A56 240 aa7.28□□□□□ -1.24
VTA1P1-201ENST00000414044 PUS7Q96PZ0 661 aaKnown RBP7.28□□□□□ -1.24
VTA1P1-201ENST00000414044 GMLQ99445 158 aa7.28□□□□□ -1.24
VTA1P1-201ENST00000414044 NPHS2Q9NP85 383 aa7.28□□□□□ -1.24
VTA1P1-201ENST00000414044 ABI2Q9NYB9 513 aaPredicted RBP7.28□□□□□ -1.24
VTA1P1-201ENST00000414044 TMEM63CQ9P1W3 806 aa7.28□□□□□ -1.24
VTA1P1-201ENST00000414044 USP31Q70CQ4 1352 aa7.28□□□□□ -1.24
VTA1P1-201ENST00000414044 HMGB1P09429 215 aaKnown RBP7.27□□□□□ -1.25
VTA1P1-201ENST00000414044 USP17L7P0C7H9 530 aa7.27□□□□□ -1.25
VTA1P1-201ENST00000414044 ATP2B1P20020 1258 aa7.27□□□□□ -1.25
VTA1P1-201ENST00000414044 RACK1P63244 317 aaKnown RBP7.27□□□□□ -1.25
VTA1P1-201ENST00000414044 MEI1Q5TIA1 1274 aa7.27□□□□□ -1.25
VTA1P1-201ENST00000414044 ARMC5Q96C12 935 aa7.27□□□□□ -1.25
VTA1P1-201ENST00000414044 SSBP4Q9BWG4 385 aaPredicted RBP7.27□□□□□ -1.25
VTA1P1-201ENST00000414044 MRPL18Q9H0U6 180 aaKnown RBP7.27□□□□□ -1.25
VTA1P1-201ENST00000414044 GGT7Q9UJ14 662 aa7.27□□□□□ -1.25
VTA1P1-201ENST00000414044 INPP5FQ9Y2H2 1132 aa7.27□□□□□ -1.25
VTA1P1-201ENST00000414044 SCO2A0A1W2PP80 73 aa7.26□□□□□ -1.25
VTA1P1-201ENST00000414044 DNAJA1P31689 397 aaKnown RBP7.26□□□□□ -1.25
VTA1P1-201ENST00000414044 ST13P50502 369 aaKnown RBP7.26□□□□□ -1.25
VTA1P1-201ENST00000414044 TAF1CQ15572 869 aaPredicted RBP7.26□□□□□ -1.25
VTA1P1-201ENST00000414044 GALNT12Q8IXK2 581 aa7.26□□□□□ -1.25
VTA1P1-201ENST00000414044 WFDC12Q8WWY7 111 aa7.26□□□□□ -1.25
VTA1P1-201ENST00000414044 SPATA32Q96LK8 384 aa7.26□□□□□ -1.25
VTA1P1-201ENST00000414044 CHRDQ9H2X0 955 aa7.26□□□□□ -1.25
VTA1P1-201ENST00000414044 PPME1Q9Y570 386 aa7.26□□□□□ -1.25
VTA1P1-201ENST00000414044 DLL1O00548 723 aa7.25□□□□□ -1.25
VTA1P1-201ENST00000414044 SMARCA5O60264 1052 aaPredicted RBP7.25□□□□□ -1.25
VTA1P1-201ENST00000414044 GADD45BO75293 160 aaPredicted RBP7.25□□□□□ -1.25
VTA1P1-201ENST00000414044 DEAF1O75398 565 aaPredicted RBP7.25□□□□□ -1.25
VTA1P1-201ENST00000414044 POLR3DP05423 398 aaPredicted RBP7.25□□□□□ -1.25
VTA1P1-201ENST00000414044 HSP90B1P14625 803 aaKnown RBP7.25□□□□□ -1.25
VTA1P1-201ENST00000414044 CANXP27824 592 aaKnown RBP7.25□□□□□ -1.25
VTA1P1-201ENST00000414044 IREB2P48200 963 aaKnown RBP7.25□□□□□ -1.25
VTA1P1-201ENST00000414044 PRSS36Q5K4E3 855 aa7.25□□□□□ -1.25
VTA1P1-201ENST00000414044 FAM117BQ6P1L5 589 aa7.25□□□□□ -1.25
VTA1P1-201ENST00000414044 DPH6Q7L8W6 267 aa7.25□□□□□ -1.25
VTA1P1-201ENST00000414044 NCAPG2Q86XI2 1143 aa7.25□□□□□ -1.25
VTA1P1-201ENST00000414044 DHX38Q92620 1227 aaKnown RBP7.25□□□□□ -1.25
VTA1P1-201ENST00000414044 DNAJC2Q99543 621 aaKnown RBP7.25□□□□□ -1.25
VTA1P1-201ENST00000414044 BCO2Q9BYV7 579 aa7.25□□□□□ -1.25
VTA1P1-201ENST00000414044 AKTIPQ9H8T0 292 aa7.25□□□□□ -1.25
VTA1P1-201ENST00000414044 EREGO14944 169 aa7.24□□□□□ -1.25
VTA1P1-201ENST00000414044 ARID5AQ03989 594 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms