RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 PAPPAQ13219 1627 aa11.65□□□□□ -0.54
SMPD4-203ENST00000412570 PLEKHG2Q9H7P9 1386 aa11.65□□□□□ -0.54
SMPD4-203ENST00000412570 RXRAP19793 462 aa11.65□□□□□ -0.54
SMPD4-203ENST00000412570 SF3B3Q15393 1217 aaKnown RBP11.65□□□□□ -0.54
SMPD4-203ENST00000412570 DPP8Q6V1X1 898 aaPredicted RBP11.65□□□□□ -0.54
SMPD4-203ENST00000412570 KIF2CQ99661 725 aa11.65□□□□□ -0.54
SMPD4-203ENST00000412570 POLLQ9UGP5 575 aa11.65□□□□□ -0.54
SMPD4-203ENST00000412570 RNF113AO15541 343 aaKnown RBP11.65□□□□□ -0.55
SMPD4-203ENST00000412570 SLURP2P0DP57 97 aa11.65□□□□□ -0.55
SMPD4-203ENST00000412570 MAST3O60307 1309 aa11.64□□□□□ -0.55
SMPD4-203ENST00000412570 GPAA1O43292 621 aa11.64□□□□□ -0.55
SMPD4-203ENST00000412570 ADRA2BP18089 450 aa11.64□□□□□ -0.55
SMPD4-203ENST00000412570 MCMDC2Q4G0Z9 681 aa11.64□□□□□ -0.55
SMPD4-203ENST00000412570 CCDC82Q8N4S0 544 aa11.64□□□□□ -0.55
SMPD4-203ENST00000412570 C4BP0C0L5 1744 aa11.64□□□□□ -0.55
SMPD4-203ENST00000412570 RAD21O60216 631 aa11.64□□□□□ -0.55
SMPD4-203ENST00000412570 PDE6AP16499 860 aa11.64□□□□□ -0.55
SMPD4-203ENST00000412570 CACNB3P54284 484 aa11.64□□□□□ -0.55
SMPD4-203ENST00000412570 ZC3H12CQ9C0D7 883 aaKnown RBP11.64□□□□□ -0.55
SMPD4-203ENST00000412570 LSG1Q9H089 658 aaKnown RBP11.64□□□□□ -0.55
SMPD4-203ENST00000412570 GGA1Q9UJY5 639 aa11.64□□□□□ -0.55
SMPD4-203ENST00000412570 CCDC171Q6TFL3 1326 aa11.64□□□□□ -0.55
SMPD4-203ENST00000412570 CTDSPL2Q05D32 466 aa11.64□□□□□ -0.55
SMPD4-203ENST00000412570 PICALMQ13492 652 aa11.64□□□□□ -0.55
SMPD4-203ENST00000412570 ADGRA1Q86SQ6 560 aa11.64□□□□□ -0.55
SMPD4-203ENST00000412570 DZIP1Q86YF9 867 aaKnown RBP11.64□□□□□ -0.55
SMPD4-203ENST00000412570 PIBF1Q8WXW3 757 aa11.64□□□□□ -0.55
SMPD4-203ENST00000412570 GNL3LQ9NVN8 582 aaKnown RBP11.64□□□□□ -0.55
SMPD4-203ENST00000412570 SAP30BPQ9UHR5 308 aaKnown RBP11.64□□□□□ -0.55
SMPD4-203ENST00000412570 SNX14Q9Y5W7 946 aa11.64□□□□□ -0.55
SMPD4-203ENST00000412570 ZNF609O15014 1411 aa11.63□□□□□ -0.55
SMPD4-203ENST00000412570 ZKSCAN1P17029 563 aaPredicted RBP11.63□□□□□ -0.55
SMPD4-203ENST00000412570 TDO2P48775 406 aa11.63□□□□□ -0.55
SMPD4-203ENST00000412570 CREB3L3Q68CJ9 461 aa11.63□□□□□ -0.55
SMPD4-203ENST00000412570 KIAA0825Q8IV33 1275 aa11.63□□□□□ -0.55
SMPD4-203ENST00000412570 RBM26Q5T8P6 1007 aaKnown RBP11.63□□□□□ -0.55
SMPD4-203ENST00000412570 MPNDQ8N594 471 aa11.63□□□□□ -0.55
SMPD4-203ENST00000412570 ISY1Q9ULR0 285 aaKnown RBP11.63□□□□□ -0.55
SMPD4-203ENST00000412570 DPEP1P16444 411 aa11.62□□□□□ -0.55
SMPD4-203ENST00000412570 MAP3K12Q12852 859 aa11.62□□□□□ -0.55
SMPD4-203ENST00000412570 AOC3Q16853 763 aa11.62□□□□□ -0.55
SMPD4-203ENST00000412570 LCORLQ8N3X6 602 aa11.62□□□□□ -0.55
SMPD4-203ENST00000412570 ZNF277Q9NRM2 450 aaPredicted RBP11.62□□□□□ -0.55
SMPD4-203ENST00000412570 CCT2P78371 535 aaKnown RBP11.62□□□□□ -0.55
SMPD4-203ENST00000412570 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.62□□□□□ -0.551e-6■■■□□ 17.9
SMPD4-203ENST00000412570 PCDHAC2Q9Y5I4 1007 aa11.62□□□□□ -0.55
SMPD4-203ENST00000412570 SLC4A4Q9Y6R1 1079 aa11.62□□□□□ -0.55
SMPD4-203ENST00000412570 RAD17O75943 681 aa11.62□□□□□ -0.55
SMPD4-203ENST00000412570 SRGNP10124 158 aa11.61□□□□□ -0.55
SMPD4-203ENST00000412570 DDX11Q96FC9 970 aa11.61□□□□□ -0.55
SMPD4-203ENST00000412570 SLC27A2O14975 620 aa11.61□□□□□ -0.55
SMPD4-203ENST00000412570 ST18O60284 1047 aa11.61□□□□□ -0.55
SMPD4-203ENST00000412570 HSPD1P10809 573 aaKnown RBP11.61□□□□□ -0.55
SMPD4-203ENST00000412570 PKP1Q13835 747 aa11.61□□□□□ -0.55
SMPD4-203ENST00000412570 NAA16Q6N069 864 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-203ENST00000412570 SAMD1Q6SPF0 538 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-203ENST00000412570 CCDC83Q8IWF9 413 aa11.61□□□□□ -0.55
SMPD4-203ENST00000412570 PCNTO95613 3336 aa11.61□□□□□ -0.55
SMPD4-203ENST00000412570 NUP188Q5SRE5 1749 aa11.61□□□□□ -0.55
SMPD4-203ENST00000412570 MFSD14BQ5SR56 506 aa11.61□□□□□ -0.55
SMPD4-203ENST00000412570 ILDR2Q71H61 639 aa11.61□□□□□ -0.55
SMPD4-203ENST00000412570 GZF1Q9H116 711 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-203ENST00000412570 CYP21A2P08686 494 aa11.6□□□□□ -0.55
SMPD4-203ENST00000412570 FGFR2P21802 821 aa11.6□□□□□ -0.55
SMPD4-203ENST00000412570 SLC10A5Q5PT55 438 aa11.6□□□□□ -0.55
SMPD4-203ENST00000412570 NHSQ6T4R5 1651 aa11.6□□□□□ -0.55
SMPD4-203ENST00000412570 SBF2Q86WG5 1849 aa11.6□□□□□ -0.55
SMPD4-203ENST00000412570 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.6□□□□□ -0.55
SMPD4-203ENST00000412570 TBC1D16Q8TBP0 767 aa11.6□□□□□ -0.55
SMPD4-203ENST00000412570 MYL10Q9BUA6 226 aa11.6□□□□□ -0.55
SMPD4-203ENST00000412570 BRIP1Q9BX63 1249 aa11.6□□□□□ -0.55
SMPD4-203ENST00000412570 LARGE1O95461 756 aa11.6□□□□□ -0.55
SMPD4-203ENST00000412570 FGAP02671 866 aa11.6□□□□□ -0.55
SMPD4-203ENST00000412570 UQCRFS1P1P0C7P4 283 aa11.6□□□□□ -0.55
SMPD4-203ENST00000412570 PDE6BP35913 854 aa11.6□□□□□ -0.55
SMPD4-203ENST00000412570 AK2P54819 239 aa11.6□□□□□ -0.55
SMPD4-203ENST00000412570 TCP10Q12799 353 aa11.6□□□□□ -0.55
SMPD4-203ENST00000412570 PDRG1Q9NUG6 133 aa11.6□□□□□ -0.55
SMPD4-203ENST00000412570 ZBTB12Q9Y330 459 aaPredicted RBP11.6□□□□□ -0.55
SMPD4-203ENST00000412570 NAPBQ9H115 298 aa11.59□□□□□ -0.55
SMPD4-203ENST00000412570 RAD50Q92878 1312 aa11.59□□□□□ -0.55
SMPD4-203ENST00000412570 CYP2D6P10635 497 aa11.59□□□□□ -0.55
SMPD4-203ENST00000412570 MECOMQ03112 1051 aa11.59□□□□□ -0.55
SMPD4-203ENST00000412570 MAPKAPK5Q8IW41 473 aa11.59□□□□□ -0.55
SMPD4-203ENST00000412570 NKX2-3Q8TAU0 364 aa11.59□□□□□ -0.55
SMPD4-203ENST00000412570 XDHP47989 1333 aa11.59□□□□□ -0.55
SMPD4-203ENST00000412570 SPEF2Q9C093 1822 aa11.59□□□□□ -0.55
SMPD4-203ENST00000412570 RBM25P49756 843 aaKnown RBP11.59□□□□□ -0.55
SMPD4-203ENST00000412570 BLOC1S2Q6QNY1 142 aa11.59□□□□□ -0.55
SMPD4-203ENST00000412570 BRF1Q92994 677 aa11.59□□□□□ -0.55
SMPD4-203ENST00000412570 ANKRD2Q9GZV1 360 aa11.59□□□□□ -0.55
SMPD4-203ENST00000412570 NCOA5Q9HCD5 579 aaKnown RBP11.59□□□□□ -0.55
SMPD4-203ENST00000412570 PPIP5K2O43314 1243 aa11.58□□□□□ -0.56
SMPD4-203ENST00000412570 POLD1P28340 1107 aa11.58□□□□□ -0.56
SMPD4-203ENST00000412570 FLAD1Q8NFF5 587 aa11.58□□□□□ -0.56
SMPD4-203ENST00000412570 UPF1Q92900 1129 aaKnown RBP eCLIP11.58□□□□□ -0.561e-11■■■■■ 41.1
SMPD4-203ENST00000412570 B4E1Z4 1266 aa11.58□□□□□ -0.56
SMPD4-203ENST00000412570 K7ELQ4 463 aaPredicted RBP11.58□□□□□ -0.56
SMPD4-203ENST00000412570 UBE4AQ14139 1066 aa11.58□□□□□ -0.56
SMPD4-203ENST00000412570 NLGN2Q8NFZ4 835 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms