RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 PFDN6O15212 129 aa8.3□□□□□ -1.08
PTPN3-203ENST00000412145 PRPF40BQ6NWY9 871 aaKnown RBP8.3□□□□□ -1.08
PTPN3-203ENST00000412145 SDCCAG8Q86SQ7 713 aaPredicted RBP8.3□□□□□ -1.08
PTPN3-203ENST00000412145 RNF10Q8N5U6 811 aaKnown RBP8.3□□□□□ -1.08
PTPN3-203ENST00000412145 STX10O60499 249 aa8.3□□□□□ -1.08
PTPN3-203ENST00000412145 RNASELQ05823 741 aaKnown RBP8.3□□□□□ -1.08
PTPN3-203ENST00000412145 PRR16Q569H4 304 aa8.3□□□□□ -1.08
PTPN3-203ENST00000412145 NGLY1Q96IV0 654 aa8.3□□□□□ -1.08
PTPN3-203ENST00000412145 SIL1Q9H173 461 aa8.3□□□□□ -1.08
PTPN3-203ENST00000412145 GNA11P29992 359 aa8.3□□□□□ -1.08
PTPN3-203ENST00000412145 NBPF8Q3BBV2 869 aa8.3□□□□□ -1.08
PTPN3-203ENST00000412145 ESR2Q92731 530 aa8.3□□□□□ -1.08
PTPN3-203ENST00000412145 ERO1AQ96HE7 468 aa8.3□□□□□ -1.08
PTPN3-203ENST00000412145 ZNF830Q96NB3 372 aaPredicted RBP8.3□□□□□ -1.08
PTPN3-203ENST00000412145 DMRT2Q9Y5R5 561 aa8.3□□□□□ -1.08
PTPN3-203ENST00000412145 KRT3P12035 628 aa8.3□□□□□ -1.08
PTPN3-203ENST00000412145 ECHDC1Q9NTX5 307 aa8.3□□□□□ -1.08
PTPN3-203ENST00000412145 PUF60Q9UHX1 559 aaKnown RBP8.3□□□□□ -1.08
PTPN3-203ENST00000412145 ZKSCAN5Q9Y2L8 839 aa8.3□□□□□ -1.08
PTPN3-203ENST00000412145 PIK3R4Q99570 1358 aa8.29□□□□□ -1.08
PTPN3-203ENST00000412145 NOLC1Q14978 699 aaKnown RBP eCLIP8.29□□□□□ -1.08
PTPN3-203ENST00000412145 PLCD3Q8N3E9 789 aa8.29□□□□□ -1.08
PTPN3-203ENST00000412145 NPHP3Q7Z494 1330 aa8.29□□□□□ -1.08
PTPN3-203ENST00000412145 RUNDC3BQ96NL0 473 aa8.29□□□□□ -1.08
PTPN3-203ENST00000412145 CABP1Q9NZU7 370 aa8.29□□□□□ -1.08
PTPN3-203ENST00000412145 C9orf84Q5VXU9 1444 aa8.29□□□□□ -1.08
PTPN3-203ENST00000412145 DEUP1Q05D60 604 aa8.29□□□□□ -1.08
PTPN3-203ENST00000412145 CCDC125Q86Z20 511 aa8.29□□□□□ -1.08
PTPN3-203ENST00000412145 SELENOSQ9BQE4 189 aa8.29□□□□□ -1.08
PTPN3-203ENST00000412145 ZSCAN22P10073 491 aaPredicted RBP8.29□□□□□ -1.08
PTPN3-203ENST00000412145 IDEP14735 1019 aa8.29□□□□□ -1.08
PTPN3-203ENST00000412145 INPP5BP32019 993 aa8.29□□□□□ -1.08
PTPN3-203ENST00000412145 ITIH3Q06033 890 aa8.29□□□□□ -1.08
PTPN3-203ENST00000412145 ARHGAP45Q92619 1136 aa8.29□□□□□ -1.08
PTPN3-203ENST00000412145 MIS12Q9H081 205 aa8.29□□□□□ -1.08
PTPN3-203ENST00000412145 FAM13AO94988 1023 aa8.29□□□□□ -1.08
PTPN3-203ENST00000412145 TMEM67Q5HYA8 995 aa8.29□□□□□ -1.08
PTPN3-203ENST00000412145 SDCCAG3Q96C92 435 aa8.29□□□□□ -1.08
PTPN3-203ENST00000412145 IMPACTQ9P2X3 320 aa8.29□□□□□ -1.08
PTPN3-203ENST00000412145 SYT1P21579 422 aa8.28□□□□□ -1.08
PTPN3-203ENST00000412145 APBA1Q02410 837 aa8.28□□□□□ -1.08
PTPN3-203ENST00000412145 GKAP1Q5VSY0 366 aaPredicted RBP8.28□□□□□ -1.08
PTPN3-203ENST00000412145 POLE3Q9NRF9 147 aa8.28□□□□□ -1.08
PTPN3-203ENST00000412145 DBF4Q9UBU7 674 aaPredicted RBP8.28□□□□□ -1.08
PTPN3-203ENST00000412145 EXOC7Q9UPT5 735 aa8.28□□□□□ -1.08
PTPN3-203ENST00000412145 EVCP57679 992 aa8.28□□□□□ -1.08
PTPN3-203ENST00000412145 GBP5Q96PP8 586 aa8.28□□□□□ -1.08
PTPN3-203ENST00000412145 YWHAEP62258 255 aaKnown RBP8.28□□□□□ -1.08
PTPN3-203ENST00000412145 SH2D4AQ9H788 454 aa8.28□□□□□ -1.08
PTPN3-203ENST00000412145 MAP3K7CLP57077 242 aa8.28□□□□□ -1.08
PTPN3-203ENST00000412145 RRAGBQ5VZM2 374 aa8.28□□□□□ -1.08
PTPN3-203ENST00000412145 EP400NLQ6ZTU2 488 aa8.28□□□□□ -1.08
PTPN3-203ENST00000412145 CDAN1Q8IWY9 1227 aa8.28□□□□□ -1.08
PTPN3-203ENST00000412145 FRMD4BQ9Y2L6 1034 aa8.28□□□□□ -1.08
PTPN3-203ENST00000412145 CLNS1AP54105 237 aaKnown RBP8.28□□□□□ -1.08
PTPN3-203ENST00000412145 CUL4BQ13620 913 aa8.28□□□□□ -1.08
PTPN3-203ENST00000412145 RPGRQ92834 1020 aaKnown RBP8.28□□□□□ -1.08
PTPN3-203ENST00000412145 ANKIB1Q9P2G1 1089 aa8.28□□□□□ -1.08
PTPN3-203ENST00000412145 INTS4Q96HW7 963 aaKnown RBP8.28□□□□□ -1.08
PTPN3-203ENST00000412145 ZMAT2Q96NC0 199 aaKnown RBP8.28□□□□□ -1.08
PTPN3-203ENST00000412145 CD109Q6YHK3 1445 aa8.28□□□□□ -1.08
PTPN3-203ENST00000412145 RANBP6O60518 1105 aaKnown RBP8.28□□□□□ -1.08
PTPN3-203ENST00000412145 SNX21Q969T3 373 aa8.28□□□□□ -1.08
PTPN3-203ENST00000412145 FAM204AQ9H8W3 233 aa8.28□□□□□ -1.08
PTPN3-203ENST00000412145 PPP2R5BQ15173 497 aa8.27□□□□□ -1.08
PTPN3-203ENST00000412145 GJB2P29033 226 aa8.27□□□□□ -1.09
PTPN3-203ENST00000412145 ATP6V1E1P36543 226 aa8.27□□□□□ -1.09
PTPN3-203ENST00000412145 SULT6B1Q6IMI4 303 aa8.27□□□□□ -1.09
PTPN3-203ENST00000412145 ZNF131P52739 623 aa8.27□□□□□ -1.09
PTPN3-203ENST00000412145 PLCD1P51178 756 aa8.27□□□□□ -1.09
PTPN3-203ENST00000412145 PAK2Q13177 524 aa8.27□□□□□ -1.09
PTPN3-203ENST00000412145 PPP1R2P3Q6NXS1 205 aa8.27□□□□□ -1.09
PTPN3-203ENST00000412145 RAB17Q9H0T7 212 aa8.27□□□□□ -1.09
PTPN3-203ENST00000412145 SAMM50Q9Y512 469 aa8.27□□□□□ -1.09
PTPN3-203ENST00000412145 RTL1A6NKG5 1358 aa8.27□□□□□ -1.09
PTPN3-203ENST00000412145 TTC36A6NLP5 189 aa8.27□□□□□ -1.09
PTPN3-203ENST00000412145 NEK1Q96PY6 1258 aa8.27□□□□□ -1.09
PTPN3-203ENST00000412145 SLC12A5Q9H2X9 1139 aa8.27□□□□□ -1.09
PTPN3-203ENST00000412145 ABCF2Q9UG63 623 aa8.27□□□□□ -1.09
PTPN3-203ENST00000412145 ANGPTL3Q9Y5C1 460 aa8.27□□□□□ -1.09
PTPN3-203ENST00000412145 EIF3CLB5ME19 914 aaKnown RBP8.27□□□□□ -1.09
PTPN3-203ENST00000412145 WDR44Q5JSH3 913 aa8.27□□□□□ -1.09
PTPN3-203ENST00000412145 PSPC1Q8WXF1 523 aaKnown RBP8.27□□□□□ -1.09
PTPN3-203ENST00000412145 EIF3CQ99613 913 aaKnown RBP8.27□□□□□ -1.09
PTPN3-203ENST00000412145 A0A1B0GVL5 298 aa8.27□□□□□ -1.09
PTPN3-203ENST00000412145 PHBP35232 272 aa8.27□□□□□ -1.09
PTPN3-203ENST00000412145 NSMCE1Q8WV22 266 aa8.27□□□□□ -1.09
PTPN3-203ENST00000412145 WDR46O15213 610 aaKnown RBP8.26□□□□□ -1.09
PTPN3-203ENST00000412145 EEF2P13639 858 aaKnown RBP8.26□□□□□ -1.09
PTPN3-203ENST00000412145 SMTNP53814 917 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 WTAPQ15007 396 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 PPP1R42Q7Z4L9 355 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 DNAI1Q9UI46 699 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.26□□□□□ -1.09
PTPN3-203ENST00000412145 RNF40O75150 1001 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 PLCB3Q01970 1234 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 SLFN5Q08AF3 891 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 KRT79Q5XKE5 535 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 PPP4R1Q8TF05 950 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 TEKT1Q969V4 418 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms