RNA–Protein interactions for RNA: ENST00000411066.1

RN7SKP259-201, Transcript of RNA, 7SK small nuclear pseudogene 259, humanhuman

BASIC

Gene RN7SKP259, Length 333 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP259-201ENST00000411066 TCRBV5S4A2TA0A5A2 114 aa12.73□□□□□ -0.37
RN7SKP259-201ENST00000411066 GOLGA6L3A6NEY3 463 aa12.73□□□□□ -0.37
RN7SKP259-201ENST00000411066 FOXP2O15409 715 aa12.73□□□□□ -0.37
RN7SKP259-201ENST00000411066 IDH1O75874 414 aaKnown RBP12.73□□□□□ -0.37
RN7SKP259-201ENST00000411066 MBD3O95983 291 aa12.73□□□□□ -0.37
RN7SKP259-201ENST00000411066 F13A1P00488 732 aa12.73□□□□□ -0.37
RN7SKP259-201ENST00000411066 FGAP02671 866 aa12.73□□□□□ -0.37
RN7SKP259-201ENST00000411066 RFC4P35249 363 aa12.73□□□□□ -0.37
RN7SKP259-201ENST00000411066 RASGRF1Q13972 1273 aa12.73□□□□□ -0.37
RN7SKP259-201ENST00000411066 COL9A3Q14050 684 aaPredicted RBP12.73□□□□□ -0.37
RN7SKP259-201ENST00000411066 SLC27A3Q5K4L6 730 aa12.73□□□□□ -0.37
RN7SKP259-201ENST00000411066 FAM182BQ5T319 152 aa12.73□□□□□ -0.37
RN7SKP259-201ENST00000411066 BICDL1Q6ZP65 573 aa12.73□□□□□ -0.37
RN7SKP259-201ENST00000411066 NECAB1Q8N987 351 aa12.73□□□□□ -0.37
RN7SKP259-201ENST00000411066 GTF3C6Q969F1 213 aa12.73□□□□□ -0.37
RN7SKP259-201ENST00000411066 LLPHQ9BRT6 129 aaKnown RBP12.73□□□□□ -0.37
RN7SKP259-201ENST00000411066 GNL3LQ9NVN8 582 aaKnown RBP12.73□□□□□ -0.37
RN7SKP259-201ENST00000411066 MYO5AQ9Y4I1 1855 aaKnown RBP12.73□□□□□ -0.37
RN7SKP259-201ENST00000411066 ZNF532Q9HCE3 1301 aa12.72□□□□□ -0.37
RN7SKP259-201ENST00000411066 PFKFB2O60825 505 aa12.72□□□□□ -0.37
RN7SKP259-201ENST00000411066 PRPF40AO75400 957 aaKnown RBP12.72□□□□□ -0.37
RN7SKP259-201ENST00000411066 RPS8P62241 208 aaKnown RBP12.72□□□□□ -0.37
RN7SKP259-201ENST00000411066 C3orf67Q6ZVT6 689 aa12.72□□□□□ -0.37
RN7SKP259-201ENST00000411066 TMEM87AQ8NBN3 555 aa12.72□□□□□ -0.37
RN7SKP259-201ENST00000411066 TCEANC2Q96MN5 208 aa12.72□□□□□ -0.37
RN7SKP259-201ENST00000411066 ANKRD2Q9GZV1 360 aa12.72□□□□□ -0.37
RN7SKP259-201ENST00000411066 GZF1Q9H116 711 aaPredicted RBP12.72□□□□□ -0.37
RN7SKP259-201ENST00000411066 MINPP1Q9UNW1 487 aa12.72□□□□□ -0.37
RN7SKP259-201ENST00000411066 MTMR6Q9Y217 621 aa12.72□□□□□ -0.37
RN7SKP259-201ENST00000411066 CARMIL3Q8ND23 1372 aa12.71□□□□□ -0.37
RN7SKP259-201ENST00000411066 ZNF213O14771 459 aa12.71□□□□□ -0.37
RN7SKP259-201ENST00000411066 SEMA3EO15041 775 aa12.71□□□□□ -0.37
RN7SKP259-201ENST00000411066 GNAT2P19087 354 aa12.71□□□□□ -0.37
RN7SKP259-201ENST00000411066 BCAMP50895 628 aa12.71□□□□□ -0.37
RN7SKP259-201ENST00000411066 EVCP57679 992 aa12.71□□□□□ -0.37
RN7SKP259-201ENST00000411066 FGD1P98174 961 aa12.71□□□□□ -0.37
RN7SKP259-201ENST00000411066 CSPP1Q1MSJ5 1256 aa12.71□□□□□ -0.37
RN7SKP259-201ENST00000411066 FOXD4L5Q5VV16 416 aaPredicted RBP12.71□□□□□ -0.37
RN7SKP259-201ENST00000411066 TTLL5Q6EMB2 1281 aa12.71□□□□□ -0.37
RN7SKP259-201ENST00000411066 FOXD4L4Q8WXT5 416 aaPredicted RBP12.71□□□□□ -0.37
RN7SKP259-201ENST00000411066 BRF1Q92994 677 aa12.71□□□□□ -0.37
RN7SKP259-201ENST00000411066 ZNF274Q96GC6 653 aaPredicted RBP12.71□□□□□ -0.37
RN7SKP259-201ENST00000411066 STRBPQ96SI9 672 aaKnown RBP12.71□□□□□ -0.37
RN7SKP259-201ENST00000411066 WWC3Q9ULE0 1092 aa12.71□□□□□ -0.37
RN7SKP259-201ENST00000411066 UBR3Q6ZT12 1888 aa12.71□□□□□ -0.37
RN7SKP259-201ENST00000411066 COL4A1P02462 1669 aa12.7□□□□□ -0.38
RN7SKP259-201ENST00000411066 PDS5AQ29RF7 1337 aaKnown RBP12.7□□□□□ -0.38
RN7SKP259-201ENST00000411066 PNPLA7Q6ZV29 1317 aa12.7□□□□□ -0.38
RN7SKP259-201ENST00000411066 CAVIN4Q5BKX8 364 aa12.7□□□□□ -0.38
RN7SKP259-201ENST00000411066 LARP1BQ659C4 914 aaKnown RBP12.7□□□□□ -0.38
RN7SKP259-201ENST00000411066 TMED8Q6PL24 325 aaPredicted RBP12.7□□□□□ -0.38
RN7SKP259-201ENST00000411066 KRT27Q7Z3Y8 459 aa12.7□□□□□ -0.38
RN7SKP259-201ENST00000411066 NCOA7Q8NI08 942 aa12.7□□□□□ -0.38
RN7SKP259-201ENST00000411066 CELF1Q92879 486 aaKnown RBP12.7□□□□□ -0.38
RN7SKP259-201ENST00000411066 AIDAQ96BJ3 306 aa12.7□□□□□ -0.38
RN7SKP259-201ENST00000411066 BRWD3Q6RI45 1802 aa12.69□□□□□ -0.38
RN7SKP259-201ENST00000411066 PATL2C9JE40 543 aaKnown RBP12.69□□□□□ -0.38
RN7SKP259-201ENST00000411066 SNAP23O00161 211 aa12.69□□□□□ -0.38
RN7SKP259-201ENST00000411066 IGSF3O75054 1194 aa12.69□□□□□ -0.38
RN7SKP259-201ENST00000411066 NCLP19338 710 aaKnown RBP12.69□□□□□ -0.38
RN7SKP259-201ENST00000411066 MCM5P33992 734 aa12.69□□□□□ -0.38
RN7SKP259-201ENST00000411066 MRE11P49959 708 aa12.69□□□□□ -0.38
RN7SKP259-201ENST00000411066 ZNF445P59923 1031 aa12.69□□□□□ -0.38
RN7SKP259-201ENST00000411066 HMGN5P82970 282 aaKnown RBP12.69□□□□□ -0.38
RN7SKP259-201ENST00000411066 SMIM5Q71RC9 77 aa12.69□□□□□ -0.38
RN7SKP259-201ENST00000411066 FBXO33Q7Z6M2 555 aa12.69□□□□□ -0.38
RN7SKP259-201ENST00000411066 RALYLQ86SE5 291 aaKnown RBP12.69□□□□□ -0.38
RN7SKP259-201ENST00000411066 MB21D2Q8IYB1 491 aaPredicted RBP12.69□□□□□ -0.38
RN7SKP259-201ENST00000411066 MAGEB6Q8N7X4 407 aa12.69□□□□□ -0.38
RN7SKP259-201ENST00000411066 SMARCC2Q8TAQ2 1214 aa12.69□□□□□ -0.38
RN7SKP259-201ENST00000411066 LRRC4BQ9NT99 713 aa12.69□□□□□ -0.38
RN7SKP259-201ENST00000411066 DENND2AQ9ULE3 1009 aa12.69□□□□□ -0.38
RN7SKP259-201ENST00000411066 KIF3AQ9Y496 699 aa12.69□□□□□ -0.38
RN7SKP259-201ENST00000411066 TAF1P21675 1872 aa12.69□□□□□ -0.38
RN7SKP259-201ENST00000411066 A0A0G2JLW4 131 aa12.68□□□□□ -0.38
RN7SKP259-201ENST00000411066 TM4SF1P30408 202 aa12.68□□□□□ -0.38
RN7SKP259-201ENST00000411066 TRDNQ13061 729 aa12.68□□□□□ -0.38
RN7SKP259-201ENST00000411066 NFIXQ14938 502 aa12.68□□□□□ -0.38
RN7SKP259-201ENST00000411066 AMIGO3Q86WK7 504 aa12.68□□□□□ -0.38
RN7SKP259-201ENST00000411066 GPT2Q8TD30 523 aa12.68□□□□□ -0.38
RN7SKP259-201ENST00000411066 TCHHQ07283 1943 aa12.68□□□□□ -0.38
RN7SKP259-201ENST00000411066 PRC1O43663 620 aa12.67□□□□□ -0.38
RN7SKP259-201ENST00000411066 APOBRQ0VD83 1088 aa12.67□□□□□ -0.38
RN7SKP259-201ENST00000411066 SCRN1Q12765 414 aa12.67□□□□□ -0.38
RN7SKP259-201ENST00000411066 STK3Q13188 491 aa12.67□□□□□ -0.38
RN7SKP259-201ENST00000411066 KLHL34Q8N239 644 aa12.67□□□□□ -0.38
RN7SKP259-201ENST00000411066 SYAP1Q96A49 352 aaPredicted RBP12.67□□□□□ -0.38
RN7SKP259-201ENST00000411066 FAM84BQ96KN1 310 aaPredicted RBP12.67□□□□□ -0.38
RN7SKP259-201ENST00000411066 LRRC2Q9BYS8 371 aa12.67□□□□□ -0.38
RN7SKP259-201ENST00000411066 LRP2BPQ9P2M1 347 aa12.67□□□□□ -0.38
RN7SKP259-201ENST00000411066 TIAM2Q8IVF5 1701 aa12.66□□□□□ -0.38
RN7SKP259-201ENST00000411066 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.66□□□□□ -0.38
RN7SKP259-201ENST00000411066 VPS37CA5D8V6 355 aaPredicted RBP12.66□□□□□ -0.38
RN7SKP259-201ENST00000411066 PHF14O94880 888 aa12.66□□□□□ -0.38
RN7SKP259-201ENST00000411066 MBD4O95243 580 aa12.66□□□□□ -0.38
RN7SKP259-201ENST00000411066 APPP05067 770 aa12.66□□□□□ -0.38
RN7SKP259-201ENST00000411066 PDIA3P30101 505 aaKnown RBP12.66□□□□□ -0.38
RN7SKP259-201ENST00000411066 HAND2P61296 217 aa12.66□□□□□ -0.38
RN7SKP259-201ENST00000411066 CAVIN1Q6NZI2 390 aaKnown RBP12.66□□□□□ -0.38
RN7SKP259-201ENST00000411066 USP48Q86UV5 1035 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms