RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 IGFLR1Q9H665 355 aa6.99□□□□□ -1.29
LSM5-205ENST00000409952 KRTAP9-6A0A140TA67 174 aa6.98□□□□□ -1.29
LSM5-205ENST00000409952 STK10O94804 968 aaKnown RBP6.98□□□□□ -1.29
LSM5-205ENST00000409952 TBC1D8BQ0IIM8 1120 aa6.98□□□□□ -1.29
LSM5-205ENST00000409952 GPATCH3Q96I76 525 aa6.98□□□□□ -1.29
LSM5-205ENST00000409952 GGNBP2Q9H3C7 697 aa6.98□□□□□ -1.29
LSM5-205ENST00000409952 ELP3Q9H9T3 547 aa6.98□□□□□ -1.29
LSM5-205ENST00000409952 ABI2Q9NYB9 513 aaPredicted RBP6.98□□□□□ -1.29
LSM5-205ENST00000409952 hCG_2014768A0A024R1R8 64 aa6.97□□□□□ -1.29
LSM5-205ENST00000409952 SPDYE3A6NKU9 549 aa6.97□□□□□ -1.29
LSM5-205ENST00000409952 ADAM23O75077 832 aa6.97□□□□□ -1.29
LSM5-205ENST00000409952 RGS9O75916 674 aaPredicted RBP6.97□□□□□ -1.29
LSM5-205ENST00000409952 SPATA31C1P0DKV0 1188 aa6.97□□□□□ -1.29
LSM5-205ENST00000409952 CPB1P15086 417 aa6.97□□□□□ -1.29
LSM5-205ENST00000409952 IGBP1P78318 339 aa6.97□□□□□ -1.29
LSM5-205ENST00000409952 MLLT1Q03111 559 aaPredicted RBP6.97□□□□□ -1.29
LSM5-205ENST00000409952 PTPROQ16827 1216 aa6.97□□□□□ -1.29
LSM5-205ENST00000409952 ZNF394Q53GI3 561 aa6.97□□□□□ -1.29
LSM5-205ENST00000409952 COL13A1Q5TAT6 717 aaPredicted RBP6.97□□□□□ -1.29
LSM5-205ENST00000409952 MCF2L2Q86YR7 1114 aa6.97□□□□□ -1.29
LSM5-205ENST00000409952 DHX37Q8IY37 1157 aaKnown RBP6.97□□□□□ -1.29
LSM5-205ENST00000409952 GJD3Q8N144 294 aa6.97□□□□□ -1.29
LSM5-205ENST00000409952 KCNB2Q92953 911 aa6.97□□□□□ -1.29
LSM5-205ENST00000409952 JPH1Q9HDC5 661 aaPredicted RBP6.97□□□□□ -1.29
LSM5-205ENST00000409952 TMEM63CQ9P1W3 806 aa6.97□□□□□ -1.29
LSM5-205ENST00000409952 AK5Q9Y6K8 562 aa6.97□□□□□ -1.29
LSM5-205ENST00000409952 CTSHP09668 335 aa6.96□□□□□ -1.3
LSM5-205ENST00000409952 RACK1P63244 317 aaKnown RBP6.96□□□□□ -1.3
LSM5-205ENST00000409952 DNM1Q05193 864 aaKnown RBP6.96□□□□□ -1.3
LSM5-205ENST00000409952 PTPN12Q05209 780 aaKnown RBP6.96□□□□□ -1.3
LSM5-205ENST00000409952 TCEAL1Q15170 157 aa6.96□□□□□ -1.3
LSM5-205ENST00000409952 USP48Q86UV5 1035 aa6.96□□□□□ -1.3
LSM5-205ENST00000409952 JAZF1Q86VZ6 243 aa6.96□□□□□ -1.3
LSM5-205ENST00000409952 NUDT8Q8WV74 236 aa6.96□□□□□ -1.3
LSM5-205ENST00000409952 METTL14Q9HCE5 456 aaKnown RBP6.96□□□□□ -1.3
LSM5-205ENST00000409952 POLIQ9UNA4 740 aa6.96□□□□□ -1.3
LSM5-205ENST00000409952 PCDHGB7Q9Y5F8 929 aa6.96□□□□□ -1.3
LSM5-205ENST00000409952 J3QW42 95 aa6.95□□□□□ -1.3
LSM5-205ENST00000409952 CLSTN1O94985 981 aa6.95□□□□□ -1.3
LSM5-205ENST00000409952 FGRP09769 529 aa6.95□□□□□ -1.3
LSM5-205ENST00000409952 IBSPP21815 317 aaPredicted RBP6.95□□□□□ -1.3
LSM5-205ENST00000409952 HSD3B2P26439 372 aa6.95□□□□□ -1.3
LSM5-205ENST00000409952 USP5P45974 858 aa6.95□□□□□ -1.3
LSM5-205ENST00000409952 BAG6P46379 1132 aa6.95□□□□□ -1.3
LSM5-205ENST00000409952 BMS1Q14692 1282 aaKnown RBP6.95□□□□□ -1.3
LSM5-205ENST00000409952 TTC39BQ5VTQ0 682 aaPredicted RBP6.95□□□□□ -1.3
LSM5-205ENST00000409952 MSL1Q68DK7 614 aa6.95□□□□□ -1.3
LSM5-205ENST00000409952 ELMSAN1Q6PJG2 1045 aa6.95□□□□□ -1.3
LSM5-205ENST00000409952 CD163Q86VB7 1156 aa6.95□□□□□ -1.3
LSM5-205ENST00000409952 KRTAP1-3Q8IUG1 177 aa6.95□□□□□ -1.3
LSM5-205ENST00000409952 BRINP2Q9C0B6 783 aa6.95□□□□□ -1.3
LSM5-205ENST00000409952 CHRDQ9H2X0 955 aa6.95□□□□□ -1.3
LSM5-205ENST00000409952 CNTN3Q9P232 1028 aa6.95□□□□□ -1.3
LSM5-205ENST00000409952 A0A0A0MRY4 1105 aa6.94□□□□□ -1.3
LSM5-205ENST00000409952 CYP2E1P05181 493 aaPredicted RBP6.94□□□□□ -1.3
LSM5-205ENST00000409952 PCSK2P16519 638 aa6.94□□□□□ -1.3
LSM5-205ENST00000409952 HYAL2Q12891 473 aa6.94□□□□□ -1.3
LSM5-205ENST00000409952 NFE2L2Q16236 605 aa6.94□□□□□ -1.3
LSM5-205ENST00000409952 HFE2Q6ZVN8 426 aa6.94□□□□□ -1.3
LSM5-205ENST00000409952 HS2ST1Q7LGA3 356 aa6.94□□□□□ -1.3
LSM5-205ENST00000409952 ZNF438Q7Z4V0 828 aa6.94□□□□□ -1.3
LSM5-205ENST00000409952 CERS3Q8IU89 383 aa6.94□□□□□ -1.3
LSM5-205ENST00000409952 DTWD1Q8N5C7 304 aa6.94□□□□□ -1.3
LSM5-205ENST00000409952 CEP120Q8N960 986 aa6.94□□□□□ -1.3
LSM5-205ENST00000409952 PLD4Q96BZ4 506 aa6.94□□□□□ -1.3
LSM5-205ENST00000409952 NSUN5Q96P11 429 aaKnown RBP6.94□□□□□ -1.3
LSM5-205ENST00000409952 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.94□□□□□ -1.3
LSM5-205ENST00000409952 SMG9Q9H0W8 520 aaKnown RBP6.94□□□□□ -1.3
LSM5-205ENST00000409952 SRA1Q9HD15 236 aaKnown RBP6.94□□□□□ -1.3
LSM5-205ENST00000409952 SALL4Q9UJQ4 1053 aa6.94□□□□□ -1.3
LSM5-205ENST00000409952 SPG7Q9UQ90 795 aa6.94□□□□□ -1.3
LSM5-205ENST00000409952 C1QTNF9BB2RNN3 333 aa6.93□□□□□ -1.3
LSM5-205ENST00000409952 MSTNO14793 375 aa6.93□□□□□ -1.3
LSM5-205ENST00000409952 EIF2AK2P19525 551 aaKnown RBP6.93□□□□□ -1.3
LSM5-205ENST00000409952 CHRNA4P43681 627 aa6.93□□□□□ -1.3
LSM5-205ENST00000409952 GJA8P48165 433 aa6.93□□□□□ -1.3
LSM5-205ENST00000409952 PRRT3Q5FWE3 981 aa6.93□□□□□ -1.3
LSM5-205ENST00000409952 ZCRB1Q8TBF4 217 aaKnown RBP6.93□□□□□ -1.3
LSM5-205ENST00000409952 MRFAP1L1Q96HT8 127 aa6.93□□□□□ -1.3
LSM5-205ENST00000409952 CSRNP1Q96S65 589 aa6.93□□□□□ -1.3
LSM5-205ENST00000409952 A6NHS1 94 aa6.92□□□□□ -1.3
LSM5-205ENST00000409952 TNFRSF21O75509 655 aa6.92□□□□□ -1.3
LSM5-205ENST00000409952 EIF4BP23588 611 aaKnown RBP6.92□□□□□ -1.3
LSM5-205ENST00000409952 ANAPC15P60006 121 aa6.92□□□□□ -1.3
LSM5-205ENST00000409952 RNF187Q5TA31 235 aaPredicted RBP6.92□□□□□ -1.3
LSM5-205ENST00000409952 FMR1NBQ8N0W7 255 aaPredicted RBP6.92□□□□□ -1.3
LSM5-205ENST00000409952 CACTIN-AS1Q8N1I8 211 aa6.92□□□□□ -1.3
LSM5-205ENST00000409952 C1orf127Q8N9H9 656 aa6.92□□□□□ -1.3
LSM5-205ENST00000409952 GGT7Q9UJ14 662 aa6.92□□□□□ -1.3
LSM5-205ENST00000409952 NOP58Q9Y2X3 529 aaKnown RBP6.92□□□□□ -1.3
LSM5-205ENST00000409952 MRPL42Q9Y6G3 142 aaKnown RBP6.92□□□□□ -1.3
LSM5-205ENST00000409952 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.92□□□□□ -1.3
LSM5-205ENST00000409952 NFKBIEO00221 500 aa6.91□□□□□ -1.3
LSM5-205ENST00000409952 GHRHP01286 108 aa6.91□□□□□ -1.3
LSM5-205ENST00000409952 XRCC5P13010 732 aaKnown RBP6.91□□□□□ -1.3
LSM5-205ENST00000409952 ELNP15502 786 aa6.91□□□□□ -1.3
LSM5-205ENST00000409952 ATF4P18848 351 aaPredicted RBP6.91□□□□□ -1.3
LSM5-205ENST00000409952 TRIM28Q13263 835 aaKnown RBP6.91□□□□□ -1.3
LSM5-205ENST00000409952 TRAPPC3LQ5T215 181 aa6.91□□□□□ -1.3
LSM5-205ENST00000409952 NBPF6Q5VWK0 638 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms