RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 TTC14Q96N46 770 aa16.88■□□□□ 0.29
LIMS2-206ENST00000409754 BSDC1Q9NW68 430 aaPredicted RBP16.88■□□□□ 0.29
LIMS2-206ENST00000409754 A0A1B0GUL6 1792 aa16.87■□□□□ 0.29
LIMS2-206ENST00000409754 TTF1Q15361 905 aaPredicted RBP16.87■□□□□ 0.29
LIMS2-206ENST00000409754 TSGA10IPQ3SY00 556 aa16.87■□□□□ 0.29
LIMS2-206ENST00000409754 C7orf43Q8WVR3 580 aa16.87■□□□□ 0.29
LIMS2-206ENST00000409754 TMX3Q96JJ7 454 aa16.87■□□□□ 0.29
LIMS2-206ENST00000409754 SEC62Q99442 399 aaKnown RBP16.87■□□□□ 0.29
LIMS2-206ENST00000409754 CWC22Q9HCG8 908 aaKnown RBP16.87■□□□□ 0.29
LIMS2-206ENST00000409754 PIM2Q9P1W9 311 aa16.87■□□□□ 0.29
LIMS2-206ENST00000409754 U3KPZ7 1027 aaPredicted RBP16.87■□□□□ 0.29
LIMS2-206ENST00000409754 AKAP11Q9UKA4 1901 aa16.86■□□□□ 0.29
LIMS2-206ENST00000409754 PHKA1P46020 1223 aa16.86■□□□□ 0.29
LIMS2-206ENST00000409754 CUL4AQ13619 759 aa16.86■□□□□ 0.29
LIMS2-206ENST00000409754 CCDC129Q6ZRS4 1044 aa16.86■□□□□ 0.29
LIMS2-206ENST00000409754 ZNF622Q969S3 477 aaKnown RBP eCLIP16.86■□□□□ 0.29
LIMS2-206ENST00000409754 ZSWIM6Q9HCJ5 1215 aa16.86■□□□□ 0.29
LIMS2-206ENST00000409754 FOXD4L1Q9NU39 408 aa16.86■□□□□ 0.29
LIMS2-206ENST00000409754 DUOX1Q9NRD9 1551 aa16.86■□□□□ 0.29
LIMS2-206ENST00000409754 FRAT2O75474 233 aaPredicted RBP16.85■□□□□ 0.29
LIMS2-206ENST00000409754 CASTP20810 708 aaKnown RBP16.85■□□□□ 0.29
LIMS2-206ENST00000409754 PSMA5P28066 241 aa16.85■□□□□ 0.29
LIMS2-206ENST00000409754 JAKMIP1Q96N16 626 aaKnown RBP16.85■□□□□ 0.29
LIMS2-206ENST00000409754 DSCC1Q9BVC3 393 aa16.85■□□□□ 0.29
LIMS2-206ENST00000409754 BCS1LQ9Y276 419 aa16.85■□□□□ 0.29
LIMS2-206ENST00000409754 RPAP1Q9BWH6 1393 aaPredicted RBP16.85■□□□□ 0.29
LIMS2-206ENST00000409754 SBF1O95248 1867 aa16.85■□□□□ 0.29
LIMS2-206ENST00000409754 ADCK5Q3MIX3 580 aa16.85■□□□□ 0.29
LIMS2-206ENST00000409754 ZSCAN25Q6NSZ9 544 aa16.85■□□□□ 0.29
LIMS2-206ENST00000409754 PI16Q6UXB8 463 aa16.85■□□□□ 0.29
LIMS2-206ENST00000409754 TTLL6Q8N841 843 aa16.85■□□□□ 0.29
LIMS2-206ENST00000409754 CELF1Q92879 486 aaKnown RBP16.85■□□□□ 0.29
LIMS2-206ENST00000409754 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.85■□□□□ 0.29
LIMS2-206ENST00000409754 CYP46A1Q9Y6A2 500 aa16.85■□□□□ 0.29
LIMS2-206ENST00000409754 MAST3O60307 1309 aa16.84■□□□□ 0.29
LIMS2-206ENST00000409754 PRELPP51888 382 aa16.84■□□□□ 0.29
LIMS2-206ENST00000409754 KRT32Q14532 448 aa16.84■□□□□ 0.29
LIMS2-206ENST00000409754 RAB3GAP1Q15042 981 aa16.84■□□□□ 0.29
LIMS2-206ENST00000409754 DALRD3Q5D0E6 543 aaKnown RBP16.84■□□□□ 0.29
LIMS2-206ENST00000409754 VPS53Q5VIR6 699 aa16.84■□□□□ 0.29
LIMS2-206ENST00000409754 APPBP2Q92624 585 aa16.84■□□□□ 0.29
LIMS2-206ENST00000409754 INTS4Q96HW7 963 aaKnown RBP16.84■□□□□ 0.29
LIMS2-206ENST00000409754 CRAMP1Q96RY5 1269 aa16.84■□□□□ 0.29
LIMS2-206ENST00000409754 CYP2E1P05181 493 aaPredicted RBP16.83■□□□□ 0.28
LIMS2-206ENST00000409754 RPS8P62241 208 aaKnown RBP16.83■□□□□ 0.28
LIMS2-206ENST00000409754 UBE4AQ14139 1066 aa16.83■□□□□ 0.28
LIMS2-206ENST00000409754 SLFNL1Q499Z3 407 aa16.83■□□□□ 0.28
LIMS2-206ENST00000409754 RUFY3Q7L099 469 aa16.83■□□□□ 0.28
LIMS2-206ENST00000409754 RPGRQ92834 1020 aaKnown RBP16.83■□□□□ 0.28
LIMS2-206ENST00000409754 OSBP2Q969R2 916 aa16.83■□□□□ 0.28
LIMS2-206ENST00000409754 MINPP1Q9UNW1 487 aa16.83■□□□□ 0.28
LIMS2-206ENST00000409754 M0R2C6 588 aa16.82■□□□□ 0.28
LIMS2-206ENST00000409754 AK2P54819 239 aa16.82■□□□□ 0.28
LIMS2-206ENST00000409754 SPATA5Q8NB90 893 aa16.82■□□□□ 0.28
LIMS2-206ENST00000409754 PDRG1Q9NUG6 133 aa16.82■□□□□ 0.28
LIMS2-206ENST00000409754 CCDC88AQ3V6T2 1871 aa16.82■□□□□ 0.28
LIMS2-206ENST00000409754 SNAP23O00161 211 aa16.81■□□□□ 0.28
LIMS2-206ENST00000409754 NFKBIEO00221 500 aa16.81■□□□□ 0.28
LIMS2-206ENST00000409754 C21orf2O43822 256 aa16.81■□□□□ 0.28
LIMS2-206ENST00000409754 HSPD1P10809 573 aaKnown RBP16.81■□□□□ 0.28
LIMS2-206ENST00000409754 ADD2P35612 726 aa16.81■□□□□ 0.28
LIMS2-206ENST00000409754 CNKSR1Q969H4 720 aa16.81■□□□□ 0.28
LIMS2-206ENST00000409754 PIH1D3Q9NQM4 214 aaKnown RBP16.81■□□□□ 0.28
LIMS2-206ENST00000409754 ZNF219Q9P2Y4 722 aaPredicted RBP16.81■□□□□ 0.28
LIMS2-206ENST00000409754 LIMCH1Q9UPQ0 1083 aa16.81■□□□□ 0.28
LIMS2-206ENST00000409754 MYH7P12883 1935 aa16.81■□□□□ 0.28
LIMS2-206ENST00000409754 COL4A5P29400 1685 aa16.81■□□□□ 0.28
LIMS2-206ENST00000409754 NUCB2P80303 420 aa16.81■□□□□ 0.28
LIMS2-206ENST00000409754 GRAPQ13588 217 aa16.81■□□□□ 0.28
LIMS2-206ENST00000409754 RASGRF1Q13972 1273 aa16.81■□□□□ 0.28
LIMS2-206ENST00000409754 UBE3CQ15386 1083 aa16.81■□□□□ 0.28
LIMS2-206ENST00000409754 GPR162Q16538 588 aa16.81■□□□□ 0.28
LIMS2-206ENST00000409754 WASHC4Q2M389 1173 aa16.81■□□□□ 0.28
LIMS2-206ENST00000409754 ZGPATQ8N5A5 531 aaKnown RBP16.81■□□□□ 0.28
LIMS2-206ENST00000409754 GRAPLQ8TC17 118 aaPredicted RBP16.81■□□□□ 0.28
LIMS2-206ENST00000409754 RBM17Q96I25 401 aaKnown RBP16.81■□□□□ 0.28
LIMS2-206ENST00000409754 ALDH8A1Q9H2A2 487 aaPredicted RBP16.81■□□□□ 0.28
LIMS2-206ENST00000409754 ZNF804BA4D1E1 1349 aa16.8■□□□□ 0.28
LIMS2-206ENST00000409754 CPA1P15085 419 aa16.8■□□□□ 0.28
LIMS2-206ENST00000409754 BCAMP50895 628 aa16.8■□□□□ 0.28
LIMS2-206ENST00000409754 BLOC1S2Q6QNY1 142 aa16.8■□□□□ 0.28
LIMS2-206ENST00000409754 NOL8Q76FK4 1167 aaKnown RBP16.8■□□□□ 0.28
LIMS2-206ENST00000409754 ANKRD2Q9GZV1 360 aa16.8■□□□□ 0.28
LIMS2-206ENST00000409754 CHD4Q14839 1912 aa16.8■□□□□ 0.28
LIMS2-206ENST00000409754 CYP21A2P08686 494 aa16.79■□□□□ 0.28
LIMS2-206ENST00000409754 SLC9C2Q5TAH2 1124 aa16.79■□□□□ 0.28
LIMS2-206ENST00000409754 TNPO1Q92973 898 aaKnown RBP16.79■□□□□ 0.28
LIMS2-206ENST00000409754 ZSCAN31Q96LW9 406 aaPredicted RBP16.79■□□□□ 0.28
LIMS2-206ENST00000409754 PPEF1O14829 653 aaPredicted RBP16.78■□□□□ 0.28
LIMS2-206ENST00000409754 RPS6KB1P23443 525 aa16.78■□□□□ 0.28
LIMS2-206ENST00000409754 RASSF7Q02833 373 aa16.78■□□□□ 0.28
LIMS2-206ENST00000409754 PUS7LQ9H0K6 701 aaKnown RBP16.78■□□□□ 0.28
LIMS2-206ENST00000409754 GNL3LQ9NVN8 582 aaKnown RBP16.78■□□□□ 0.28
LIMS2-206ENST00000409754 TAF6LQ9Y6J9 622 aa16.78■□□□□ 0.28
LIMS2-206ENST00000409754 IDH1O75874 414 aaKnown RBP16.78■□□□□ 0.28
LIMS2-206ENST00000409754 PDE6AP16499 860 aa16.78■□□□□ 0.28
LIMS2-206ENST00000409754 ALDH1B1P30837 517 aa16.78■□□□□ 0.28
LIMS2-206ENST00000409754 MCM4P33991 863 aa16.78■□□□□ 0.28
LIMS2-206ENST00000409754 MAP3K12Q12852 859 aa16.78■□□□□ 0.28
LIMS2-206ENST00000409754 ANKRD1Q15327 319 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms