RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 PIP4K2BP78356 416 aa7.5□□□□□ -1.21
PMS1-203ENST00000409593 VN1R5Q7Z5H4 357 aa7.5□□□□□ -1.21
PMS1-203ENST00000409593 TXNRD3Q86VQ6 643 aa7.5□□□□□ -1.21
PMS1-203ENST00000409593 KLHL23Q8NBE8 558 aa7.5□□□□□ -1.21
PMS1-203ENST00000409593 TCF12Q99081 682 aa7.5□□□□□ -1.21
PMS1-203ENST00000409593 MRPL18Q9H0U6 180 aaKnown RBP7.5□□□□□ -1.21
PMS1-203ENST00000409593 NLRP2Q9NX02 1062 aa7.5□□□□□ -1.21
PMS1-203ENST00000409593 GRIA4P48058 902 aa7.49□□□□□ -1.21
PMS1-203ENST00000409593 ARL4DP49703 201 aa7.49□□□□□ -1.21
PMS1-203ENST00000409593 SPRED3Q2MJR0 410 aa7.49□□□□□ -1.21
PMS1-203ENST00000409593 KIAA0319Q5VV43 1072 aa7.49□□□□□ -1.21
PMS1-203ENST00000409593 PI16Q6UXB8 463 aa7.49□□□□□ -1.21
PMS1-203ENST00000409593 HOMEZQ8IX15 550 aa7.49□□□□□ -1.21
PMS1-203ENST00000409593 KLHDC7BQ96G42 594 aa7.49□□□□□ -1.21
PMS1-203ENST00000409593 DDX3YO15523 660 aaKnown RBP7.48□□□□□ -1.21
PMS1-203ENST00000409593 IREB2P48200 963 aaKnown RBP7.48□□□□□ -1.21
PMS1-203ENST00000409593 NLRP12P59046 1061 aa7.48□□□□□ -1.21
PMS1-203ENST00000409593 FMR1Q06787 632 aaKnown RBP eCLIP7.48□□□□□ -1.21
PMS1-203ENST00000409593 DOC2BQ14184 412 aa7.48□□□□□ -1.21
PMS1-203ENST00000409593 ENOX2Q16206 610 aaKnown RBP7.48□□□□□ -1.21
PMS1-203ENST00000409593 ACAD11Q709F0 780 aa7.48□□□□□ -1.21
PMS1-203ENST00000409593 WNT8BQ93098 351 aa7.48□□□□□ -1.21
PMS1-203ENST00000409593 GZF1Q9H116 711 aaPredicted RBP7.48□□□□□ -1.21
PMS1-203ENST00000409593 KCNK4Q9NYG8 393 aa7.48□□□□□ -1.21
PMS1-203ENST00000409593 C19orf57Q0VDD7 668 aa7.47□□□□□ -1.21
PMS1-203ENST00000409593 HGSNATQ68CP4 663 aa7.47□□□□□ -1.21
PMS1-203ENST00000409593 KRTAP1-3Q8IUG1 177 aa7.47□□□□□ -1.21
PMS1-203ENST00000409593 AGGF1Q8N302 714 aaeCLIP7.47□□□□□ -1.21
PMS1-203ENST00000409593 OSGEPQ9NPF4 335 aa7.47□□□□□ -1.21
PMS1-203ENST00000409593 SOX1O00570 391 aaPredicted RBP7.47□□□□□ -1.21
PMS1-203ENST00000409593 ALX3O95076 343 aa7.47□□□□□ -1.21
PMS1-203ENST00000409593 WISP1O95388 367 aa7.47□□□□□ -1.21
PMS1-203ENST00000409593 ESRRAP11474 423 aaPredicted RBP7.47□□□□□ -1.21
PMS1-203ENST00000409593 ATP2B2Q01814 1243 aa7.47□□□□□ -1.21
PMS1-203ENST00000409593 GRM2Q14416 872 aa7.47□□□□□ -1.21
PMS1-203ENST00000409593 DUOXA2Q1HG44 320 aa7.47□□□□□ -1.21
PMS1-203ENST00000409593 WFDC12Q8WWY7 111 aa7.47□□□□□ -1.21
PMS1-203ENST00000409593 AKTIPQ9H8T0 292 aa7.47□□□□□ -1.21
PMS1-203ENST00000409593 TRAK1Q9UPV9 953 aa7.47□□□□□ -1.21
PMS1-203ENST00000409593 ADAM11O75078 769 aa7.46□□□□□ -1.22
PMS1-203ENST00000409593 NOS3P29474 1203 aa7.46□□□□□ -1.22
PMS1-203ENST00000409593 PCDH1Q08174 1060 aa7.46□□□□□ -1.22
PMS1-203ENST00000409593 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.46□□□□□ -1.22
PMS1-203ENST00000409593 UBASH3BQ8TF42 649 aa7.46□□□□□ -1.22
PMS1-203ENST00000409593 FOXD4L4Q8WXT5 416 aaPredicted RBP7.46□□□□□ -1.22
PMS1-203ENST00000409593 SETDB2Q96T68 719 aa7.46□□□□□ -1.22
PMS1-203ENST00000409593 CLEC4MQ9H2X3 399 aaPredicted RBP7.46□□□□□ -1.22
PMS1-203ENST00000409593 ABCB6Q9NP58 842 aa7.46□□□□□ -1.22
PMS1-203ENST00000409593 TPSG1Q9NRR2 321 aa7.46□□□□□ -1.22
PMS1-203ENST00000409593 F8W735 103 aaPredicted RBP7.45□□□□□ -1.22
PMS1-203ENST00000409593 P4HBP07237 508 aaKnown RBP7.45□□□□□ -1.22
PMS1-203ENST00000409593 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.45□□□□□ -1.22
PMS1-203ENST00000409593 ANKRD33BA6NCL7 494 aa7.44□□□□□ -1.22
PMS1-203ENST00000409593 TM4SF5O14894 197 aa7.44□□□□□ -1.22
PMS1-203ENST00000409593 FURINP09958 794 aa7.44□□□□□ -1.22
PMS1-203ENST00000409593 GLB1P16278 677 aa7.44□□□□□ -1.22
PMS1-203ENST00000409593 GSTM4Q03013 218 aa7.44□□□□□ -1.22
PMS1-203ENST00000409593 PRPF40BQ6NWY9 871 aaKnown RBP7.44□□□□□ -1.22
PMS1-203ENST00000409593 USP26Q9BXU7 913 aa7.44□□□□□ -1.22
PMS1-203ENST00000409593 BCO2Q9BYV7 579 aa7.44□□□□□ -1.22
PMS1-203ENST00000409593 ZNF576Q9H609 170 aa7.44□□□□□ -1.22
PMS1-203ENST00000409593 WWC3Q9ULE0 1092 aa7.44□□□□□ -1.22
PMS1-203ENST00000409593 FCGRTP55899 365 aa7.44□□□□□ -1.22
PMS1-203ENST00000409593 DTHD1Q6ZMT9 781 aa7.44□□□□□ -1.22
PMS1-203ENST00000409593 TP53INP1Q96A56 240 aa7.44□□□□□ -1.22
PMS1-203ENST00000409593 TMEM238LA0A1B0GVL6 79 aa7.43□□□□□ -1.22
PMS1-203ENST00000409593 ITPKAP23677 461 aa7.43□□□□□ -1.22
PMS1-203ENST00000409593 CCDC27Q2M243 656 aa7.43□□□□□ -1.22
PMS1-203ENST00000409593 ALG1LQ6GMV1 187 aa7.43□□□□□ -1.22
PMS1-203ENST00000409593 TMEM130Q8N3G9 435 aa7.43□□□□□ -1.22
PMS1-203ENST00000409593 FBF1Q8TES7 1133 aa7.43□□□□□ -1.22
PMS1-203ENST00000409593 MEGF10Q96KG7 1140 aa7.43□□□□□ -1.22
PMS1-203ENST00000409593 PPP4R2Q9NY27 417 aa7.43□□□□□ -1.22
PMS1-203ENST00000409593 LDHBP07195 334 aaKnown RBP7.42□□□□□ -1.22
PMS1-203ENST00000409593 ZNF423Q2M1K9 1284 aa7.42□□□□□ -1.22
PMS1-203ENST00000409593 NXPE4Q6UWF7 544 aa7.42□□□□□ -1.22
PMS1-203ENST00000409593 GLIS3Q8NEA6 775 aa7.42□□□□□ -1.22
PMS1-203ENST00000409593 SOX17Q9H6I2 414 aaPredicted RBP7.42□□□□□ -1.22
PMS1-203ENST00000409593 ZBTB7CA1YPR0 619 aa7.41□□□□□ -1.22
PMS1-203ENST00000409593 KIAA1211Q6ZU35 1233 aa7.41□□□□□ -1.22
PMS1-203ENST00000409593 RUSC1Q9BVN2 902 aa7.41□□□□□ -1.22
PMS1-203ENST00000409593 ZNF157P51786 506 aaPredicted RBP7.41□□□□□ -1.22
PMS1-203ENST00000409593 PTPN12Q05209 780 aaKnown RBP7.4□□□□□ -1.23
PMS1-203ENST00000409593 RNF208Q9H0X6 261 aa7.4□□□□□ -1.23
PMS1-203ENST00000409593 GPN3Q9UHW5 284 aaPredicted RBP7.4□□□□□ -1.23
PMS1-203ENST00000409593 AKAP2Q9Y2D5 859 aa7.4□□□□□ -1.23
PMS1-203ENST00000409593 LOC100289279A0A1B0GTE1 492 aa7.39□□□□□ -1.23
PMS1-203ENST00000409593 K7ELQ4 463 aaPredicted RBP7.39□□□□□ -1.23
PMS1-203ENST00000409593 B3GALT4O96024 378 aa7.39□□□□□ -1.23
PMS1-203ENST00000409593 RSPO4Q2I0M5 234 aaPredicted RBP7.39□□□□□ -1.23
PMS1-203ENST00000409593 EAPPQ56P03 285 aaPredicted RBP7.39□□□□□ -1.23
PMS1-203ENST00000409593 DNAJC14Q6Y2X3 702 aaPredicted RBP7.39□□□□□ -1.23
PMS1-203ENST00000409593 DDX54Q8TDD1 881 aaKnown RBP7.39□□□□□ -1.23
PMS1-203ENST00000409593 SSBP4Q9BWG4 385 aaPredicted RBP7.39□□□□□ -1.23
PMS1-203ENST00000409593 CEP41Q9BYV8 373 aa7.39□□□□□ -1.23
PMS1-203ENST00000409593 SPG7Q9UQ90 795 aa7.39□□□□□ -1.23
PMS1-203ENST00000409593 FDX2Q6P4F2 183 aa7.38□□□□□ -1.23
PMS1-203ENST00000409593 Q6ZS46 218 aa7.38□□□□□ -1.23
PMS1-203ENST00000409593 EIF4EBP3O60516 100 aaPredicted RBP7.38□□□□□ -1.23
PMS1-203ENST00000409593 ADAM23O75077 832 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms