RNA–Protein interactions for RNA: ENST00000408981.6

RPE-203, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-203ENST00000408981 USP16Q9Y5T5 823 aa11.34□□□□□ -0.59
RPE-203ENST00000408981 CHD8Q9HCK8 2581 aa11.34□□□□□ -0.59
RPE-203ENST00000408981 DDX60Q8IY21 1712 aaKnown RBP11.34□□□□□ -0.59
RPE-203ENST00000408981 TCF20Q9UGU0 1960 aaKnown RBP11.34□□□□□ -0.59
RPE-203ENST00000408981 PRR33A8MZF0 331 aa11.33□□□□□ -0.6
RPE-203ENST00000408981 SASH1O94885 1247 aa11.33□□□□□ -0.6
RPE-203ENST00000408981 AKNAD1Q5T1N1 836 aa11.33□□□□□ -0.6
RPE-203ENST00000408981 DDX46Q7L014 1031 aaKnown RBP11.33□□□□□ -0.6
RPE-203ENST00000408981 ANKRD13AQ8IZ07 590 aa11.33□□□□□ -0.6
RPE-203ENST00000408981 ZBTB38Q8NAP3 1195 aaPredicted RBP11.33□□□□□ -0.6
RPE-203ENST00000408981 GMLQ99445 158 aa11.33□□□□□ -0.6
RPE-203ENST00000408981 POLLQ9UGP5 575 aa11.33□□□□□ -0.6
RPE-203ENST00000408981 GRAPQ13588 217 aa11.32□□□□□ -0.6
RPE-203ENST00000408981 KCTD2Q14681 263 aa11.32□□□□□ -0.6
RPE-203ENST00000408981 C9orf50Q5SZB4 431 aa11.32□□□□□ -0.6
RPE-203ENST00000408981 GRAPLQ8TC17 118 aaPredicted RBP11.32□□□□□ -0.6
RPE-203ENST00000408981 L3MBTL2Q969R5 705 aa11.32□□□□□ -0.6
RPE-203ENST00000408981 CARD11Q9BXL7 1154 aa11.32□□□□□ -0.6
RPE-203ENST00000408981 ZC3H12CQ9C0D7 883 aaKnown RBP11.32□□□□□ -0.6
RPE-203ENST00000408981 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.32□□□□□ -0.6
RPE-203ENST00000408981 TSPYL2Q9H2G4 693 aaPredicted RBP11.32□□□□□ -0.6
RPE-203ENST00000408981 UBN2Q6ZU65 1347 aa11.32□□□□□ -0.6
RPE-203ENST00000408981 NTSR2O95665 410 aa11.31□□□□□ -0.6
RPE-203ENST00000408981 ITGB8P26012 769 aa11.31□□□□□ -0.6
RPE-203ENST00000408981 C17orf99Q6UX52 265 aa11.31□□□□□ -0.6
RPE-203ENST00000408981 TMC4Q7Z404 712 aa11.31□□□□□ -0.6
RPE-203ENST00000408981 OGFOD1Q8N543 542 aa11.31□□□□□ -0.6
RPE-203ENST00000408981 KHSRPQ92945 711 aaKnown RBP eCLIP11.31□□□□□ -0.63e-8■■■■□ 21.2
RPE-203ENST00000408981 DEFB129Q9H1M3 183 aa11.31□□□□□ -0.6
RPE-203ENST00000408981 KCNH6Q9H252 994 aa11.31□□□□□ -0.6
RPE-203ENST00000408981 GABRQQ9UN88 632 aa11.31□□□□□ -0.6
RPE-203ENST00000408981 SCN9AQ15858 1988 aa11.3□□□□□ -0.6
RPE-203ENST00000408981 FCGRTP55899 365 aa11.3□□□□□ -0.6
RPE-203ENST00000408981 TEFQ10587 303 aa11.3□□□□□ -0.6
RPE-203ENST00000408981 AAK1Q2M2I8 961 aa11.3□□□□□ -0.6
RPE-203ENST00000408981 ERMP1Q7Z2K6 904 aa11.3□□□□□ -0.6
RPE-203ENST00000408981 PHOX2BQ99453 314 aa11.3□□□□□ -0.6
RPE-203ENST00000408981 CXXC1Q9P0U4 656 aaPredicted RBP11.3□□□□□ -0.6
RPE-203ENST00000408981 PFASO15067 1338 aa11.3□□□□□ -0.6
RPE-203ENST00000408981 RGS20O76081 388 aa11.29□□□□□ -0.6
RPE-203ENST00000408981 KCNQ1P51787 676 aa11.29□□□□□ -0.6
RPE-203ENST00000408981 GPSM2P81274 684 aa11.29□□□□□ -0.6
RPE-203ENST00000408981 NBPF10Q6P3W6 841 aaKnown RBP11.29□□□□□ -0.6
RPE-203ENST00000408981 PPP1R42Q7Z4L9 355 aa11.29□□□□□ -0.6
RPE-203ENST00000408981 ZCCHC17Q9NP64 241 aaKnown RBP11.29□□□□□ -0.6
RPE-203ENST00000408981 COL1A1P02452 1464 aaPredicted RBP11.29□□□□□ -0.6
RPE-203ENST00000408981 DDX60LQ5H9U9 1706 aaKnown RBP11.29□□□□□ -0.6
RPE-203ENST00000408981 BTBD19C9JJ37 291 aa11.28□□□□□ -0.6
RPE-203ENST00000408981 USP2O75604 605 aaPredicted RBP11.28□□□□□ -0.6
RPE-203ENST00000408981 CACNB1Q02641 598 aaPredicted RBP11.28□□□□□ -0.6
RPE-203ENST00000408981 TFF2Q03403 129 aa11.28□□□□□ -0.6
RPE-203ENST00000408981 LRRC26Q2I0M4 334 aa11.28□□□□□ -0.6
RPE-203ENST00000408981 SUPT20HL1Q3ZLR7 823 aa11.28□□□□□ -0.6
RPE-203ENST00000408981 NGEFQ8N5V2 710 aa11.28□□□□□ -0.6
RPE-203ENST00000408981 PXYLP1Q8TE99 480 aa11.28□□□□□ -0.6
RPE-203ENST00000408981 ZNF576Q9H609 170 aa11.28□□□□□ -0.6
RPE-203ENST00000408981 PRKAG2Q9UGJ0 569 aa11.28□□□□□ -0.6
RPE-203ENST00000408981 TAOK2Q9UL54 1235 aa11.28□□□□□ -0.6
RPE-203ENST00000408981 USP17L3A6NCW0 530 aa11.27□□□□□ -0.61
RPE-203ENST00000408981 USP17L4A6NCW7 530 aa11.27□□□□□ -0.61
RPE-203ENST00000408981 PI4K2BG5E9Z4 385 aa11.27□□□□□ -0.61
RPE-203ENST00000408981 FLT3LGP49771 235 aa11.27□□□□□ -0.61
RPE-203ENST00000408981 CSPP1Q1MSJ5 1256 aa11.27□□□□□ -0.61
RPE-203ENST00000408981 USP17L1Q7RTZ2 530 aa11.27□□□□□ -0.61
RPE-203ENST00000408981 TBC1D16Q8TBP0 767 aa11.27□□□□□ -0.61
RPE-203ENST00000408981 SPTBN4Q9H254 2564 aa11.26□□□□□ -0.61
RPE-203ENST00000408981 ERVV-1B6SEH8 477 aa11.26□□□□□ -0.61
RPE-203ENST00000408981 CETPP11597 493 aa11.26□□□□□ -0.61
RPE-203ENST00000408981 IGFBP4P22692 258 aa11.26□□□□□ -0.61
RPE-203ENST00000408981 COL9A2Q14055 689 aaPredicted RBP11.26□□□□□ -0.61
RPE-203ENST00000408981 SLC10A5Q5PT55 438 aa11.26□□□□□ -0.61
RPE-203ENST00000408981 EPG5Q9HCE0 2579 aa11.25□□□□□ -0.61
RPE-203ENST00000408981 CFAP54Q96N23 3096 aa11.25□□□□□ -0.61
RPE-203ENST00000408981 KCNQ3O43525 872 aa11.25□□□□□ -0.61
RPE-203ENST00000408981 DNAJB2P25686 324 aa11.25□□□□□ -0.61
RPE-203ENST00000408981 PRDM12Q9H4Q4 367 aa11.25□□□□□ -0.61
RPE-203ENST00000408981 PPP2R3BQ9Y5P8 575 aa11.25□□□□□ -0.61
RPE-203ENST00000408981 LRRC37AA6NMS7 1700 aa11.25□□□□□ -0.61
RPE-203ENST00000408981 MAP3K15Q6ZN16 1313 aa11.25□□□□□ -0.61
RPE-203ENST00000408981 U2AF1L5P0DN76 240 aaPredicted RBP11.24□□□□□ -0.61
RPE-203ENST00000408981 U2AF1Q01081 240 aaKnown RBP eCLIP11.24□□□□□ -0.61
RPE-203ENST00000408981 MTHFSDQ2M296 383 aaKnown RBP11.24□□□□□ -0.61
RPE-203ENST00000408981 NBPF12Q5TAG4 269 aaPredicted RBP11.24□□□□□ -0.61
RPE-203ENST00000408981 KIF6Q6ZMV9 814 aa11.24□□□□□ -0.61
RPE-203ENST00000408981 UTP14AQ9BVJ6 771 aaKnown RBP11.24□□□□□ -0.61
RPE-203ENST00000408981 CARD14Q9BXL6 1004 aa11.24□□□□□ -0.61
RPE-203ENST00000408981 ATRXP46100 2492 aa11.24□□□□□ -0.61
RPE-203ENST00000408981 GFRA3O60609 400 aa11.23□□□□□ -0.61
RPE-203ENST00000408981 SNRPA1P09661 255 aaKnown RBP11.23□□□□□ -0.61
RPE-203ENST00000408981 HCLS1P14317 486 aaPredicted RBP11.23□□□□□ -0.61
RPE-203ENST00000408981 IRF5Q13568 498 aa11.23□□□□□ -0.61
RPE-203ENST00000408981 ZNF34Q8IZ26 560 aa11.23□□□□□ -0.61
RPE-203ENST00000408981 FBXW7Q969H0 707 aa11.23□□□□□ -0.61
RPE-203ENST00000408981 MXD3Q9BW11 206 aa11.23□□□□□ -0.61
RPE-203ENST00000408981 ZBTB3Q9H5J0 574 aa11.23□□□□□ -0.61
RPE-203ENST00000408981 OGDHLQ9ULD0 1010 aa11.23□□□□□ -0.61
RPE-203ENST00000408981 COL3A1P02461 1466 aaPredicted RBP11.23□□□□□ -0.61
RPE-203ENST00000408981 UFL1O94874 794 aa11.22□□□□□ -0.61
RPE-203ENST00000408981 COL6A1P12109 1028 aa11.22□□□□□ -0.61
RPE-203ENST00000408981 C1QBPQ07021 282 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms