RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 ZC3H12CQ9C0D7 883 aaKnown RBP15.15■□□□□ 0.02
CACNA1C-222ENST00000406454 JADE2Q9NQC1 790 aa15.15■□□□□ 0.02
CACNA1C-222ENST00000406454 CYLC1P35663 651 aaPredicted RBP15.15■□□□□ 0.02
CACNA1C-222ENST00000406454 SPAG5Q96R06 1193 aa15.15■□□□□ 0.02
CACNA1C-222ENST00000406454 RPS6KB1P23443 525 aa15.15■□□□□ 0.02
CACNA1C-222ENST00000406454 HLTFQ14527 1009 aaKnown RBP eCLIP15.15■□□□□ 0.02
CACNA1C-222ENST00000406454 SMARCC2Q8TAQ2 1214 aa15.15■□□□□ 0.02
CACNA1C-222ENST00000406454 SLC52A2Q9HAB3 445 aa15.15■□□□□ 0.02
CACNA1C-222ENST00000406454 LDHBP07195 334 aaKnown RBP15.15■□□□□ 0.02
CACNA1C-222ENST00000406454 RXRAP19793 462 aa15.15■□□□□ 0.02
CACNA1C-222ENST00000406454 ITGA6P23229 1130 aa15.15■□□□□ 0.02
CACNA1C-222ENST00000406454 PARP10Q53GL7 1025 aa15.14■□□□□ 0.01
CACNA1C-222ENST00000406454 OGFOD1Q8N543 542 aa15.14■□□□□ 0.01
CACNA1C-222ENST00000406454 DENND2AQ9ULE3 1009 aa15.14■□□□□ 0.01
CACNA1C-222ENST00000406454 KLHDC4Q8TBB5 520 aa15.14■□□□□ 0.01
CACNA1C-222ENST00000406454 BLMP54132 1417 aaPredicted RBP15.14■□□□□ 0.01
CACNA1C-222ENST00000406454 CCDC174Q6PII3 467 aa15.14■□□□□ 0.01
CACNA1C-222ENST00000406454 CCDC129Q6ZRS4 1044 aa15.14■□□□□ 0.01
CACNA1C-222ENST00000406454 SLC27A2O14975 620 aa15.14■□□□□ 0.01
CACNA1C-222ENST00000406454 CCDC172P0C7W6 258 aa15.14■□□□□ 0.01
CACNA1C-222ENST00000406454 ZKSCAN5Q9Y2L8 839 aa15.14■□□□□ 0.01
CACNA1C-222ENST00000406454 SH3TC1Q8TE82 1336 aa15.14■□□□□ 0.01
CACNA1C-222ENST00000406454 PLEKHG3A1L390 1219 aa15.14■□□□□ 0.01
CACNA1C-222ENST00000406454 POLR3GO15318 223 aaPredicted RBP15.14■□□□□ 0.01
CACNA1C-222ENST00000406454 PRPF4BQ13523 1007 aaKnown RBP15.14■□□□□ 0.01
CACNA1C-222ENST00000406454 KRT79Q5XKE5 535 aa15.14■□□□□ 0.01
CACNA1C-222ENST00000406454 CDCA7Q9BWT1 371 aaPredicted RBP15.14■□□□□ 0.01
CACNA1C-222ENST00000406454 TAOK3Q9H2K8 898 aa15.14■□□□□ 0.01
CACNA1C-222ENST00000406454 ZSWIM4Q9H7M6 989 aa15.14■□□□□ 0.01
CACNA1C-222ENST00000406454 LMOD1P29536 600 aaPredicted RBP15.13■□□□□ 0.01
CACNA1C-222ENST00000406454 IFI16Q16666 785 aaKnown RBP15.13■□□□□ 0.01
CACNA1C-222ENST00000406454 SUCLG2Q96I99 432 aa15.13■□□□□ 0.01
CACNA1C-222ENST00000406454 SNX14Q9Y5W7 946 aa15.13■□□□□ 0.01
CACNA1C-222ENST00000406454 ATL3Q6DD88 541 aa15.13■□□□□ 0.01
CACNA1C-222ENST00000406454 DYNC1I1O14576 645 aa15.13■□□□□ 0.01
CACNA1C-222ENST00000406454 MMRN2Q9H8L6 949 aa15.13■□□□□ 0.01
CACNA1C-222ENST00000406454 CLCN1P35523 988 aa15.13■□□□□ 0.01
CACNA1C-222ENST00000406454 TNNI2P48788 182 aa15.13■□□□□ 0.01
CACNA1C-222ENST00000406454 BICD1Q96G01 975 aa15.13■□□□□ 0.01
CACNA1C-222ENST00000406454 RBM28Q9NW13 759 aaKnown RBP15.13■□□□□ 0.01
CACNA1C-222ENST00000406454 GCOM1H8Y6P7 765 aaPredicted RBP15.12■□□□□ 0.01
CACNA1C-222ENST00000406454 MYZAPP0CAP1 466 aa15.12■□□□□ 0.01
CACNA1C-222ENST00000406454 PNMA6EA0A0J9YXQ4 647 aa15.12■□□□□ 0.01
CACNA1C-222ENST00000406454 SGSM2O43147 1006 aa15.12■□□□□ 0.01
CACNA1C-222ENST00000406454 CTNNA2P26232 953 aa15.12■□□□□ 0.01
CACNA1C-222ENST00000406454 DNAI1Q9UI46 699 aa15.12■□□□□ 0.01
CACNA1C-222ENST00000406454 ARHGEF10O15013 1369 aa15.12■□□□□ 0.01
CACNA1C-222ENST00000406454 XAGE2Q96GT9 111 aa15.12■□□□□ 0.01
CACNA1C-222ENST00000406454 PUM3Q15397 648 aaKnown RBP15.12■□□□□ 0.01
CACNA1C-222ENST00000406454 SPECC1Q5M775 1068 aa15.12■□□□□ 0.01
CACNA1C-222ENST00000406454 PDE8AO60658 829 aa15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 MAP2K1Q02750 393 aaPredicted RBP15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 GNA11P29992 359 aa15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 MPHOSPH6Q99547 160 aaKnown RBP15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 ZKSCAN3Q9BRR0 538 aa15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 KIAA0232Q92628 1395 aa15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 BMS1Q14692 1282 aaKnown RBP15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 TFCP2L1Q9NZI6 479 aa15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 GNPATO15228 680 aa15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 EIF4A1P60842 406 aaKnown RBP15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 CCDC91Q7Z6B0 441 aa15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 HOOK3Q86VS8 718 aa15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 FERMT2Q96AC1 680 aa15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 EYA3Q99504 573 aa15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 TTC12Q9H892 705 aaPredicted RBP15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 KRT13P13646 458 aa15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 MCM7P33993 719 aa15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 CKAP4Q07065 602 aaKnown RBP15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 TMEM87BQ96K49 555 aa15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 PARP3Q9Y6F1 533 aa15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 GCKRQ14397 625 aa15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 TBC1D5Q92609 795 aa15.11■□□□□ 0.01
CACNA1C-222ENST00000406454 USP37Q86T82 979 aa15.1■□□□□ 0.01
CACNA1C-222ENST00000406454 APPBP2Q92624 585 aa15.1■□□□□ 0.01
CACNA1C-222ENST00000406454 GTPBP4Q9BZE4 634 aaKnown RBP15.1■□□□□ 0.01
CACNA1C-222ENST00000406454 B4E1Z4 1266 aa15.1■□□□□ 0.01
CACNA1C-222ENST00000406454 A1BGP04217 495 aa15.1■□□□□ 0.01
CACNA1C-222ENST00000406454 JAG2Q9Y219 1238 aa15.1■□□□□ 0.01
CACNA1C-222ENST00000406454 TUBB4AP04350 444 aa15.1■□□□□ 0.01
CACNA1C-222ENST00000406454 FAM227BQ96M60 508 aa15.1■□□□□ 0.01
CACNA1C-222ENST00000406454 CTAGE15A4D2H0 777 aa15.1■□□□□ 0.01
CACNA1C-222ENST00000406454 RIMBP2O15034 1052 aa15.1■□□□□ 0.01
CACNA1C-222ENST00000406454 CTAGE8P0CG41 777 aa15.1■□□□□ 0.01
CACNA1C-222ENST00000406454 CTAGE6Q86UF2 777 aa15.1■□□□□ 0.01
CACNA1C-222ENST00000406454 CTAGE4Q8IX94 777 aa15.1■□□□□ 0.01
CACNA1C-222ENST00000406454 PUF60Q9UHX1 559 aaKnown RBP15.1■□□□□ 0.01
CACNA1C-222ENST00000406454 TMEM2Q9UHN6 1383 aa15.1■□□□□ 0.01
CACNA1C-222ENST00000406454 TTC6Q86TZ1 520 aa15.1■□□□□ 0.01
CACNA1C-222ENST00000406454 ZNF594Q96JF6 807 aaPredicted RBP15.1■□□□□ 0.01
CACNA1C-222ENST00000406454 SPDYE3A6NKU9 549 aa15.09■□□□□ 0.01
CACNA1C-222ENST00000406454 CTR9Q6PD62 1173 aa15.09■□□□□ 0.01
CACNA1C-222ENST00000406454 RNF123Q5XPI4 1314 aa15.09■□□□□ 0.01
CACNA1C-222ENST00000406454 STX17P56962 302 aa15.09■□□□□ 0.01
CACNA1C-222ENST00000406454 IQUBQ8NA54 791 aa15.09■□□□□ 0.01
CACNA1C-222ENST00000406454 KIF24Q5T7B8 1368 aa15.09■□□□□ 0.01
CACNA1C-222ENST00000406454 FAM160A1Q05DH4 1040 aa15.09■□□□□ 0.01
CACNA1C-222ENST00000406454 TRAPPC3LQ5T215 181 aa15.09■□□□□ 0.01
CACNA1C-222ENST00000406454 PRDM10Q9NQV6 1147 aa15.09■□□□□ 0.01
CACNA1C-222ENST00000406454 ARMT1Q9H993 441 aa15.09■□□□□ 0.01
CACNA1C-222ENST00000406454 BICDL2A1A5D9 508 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms