RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 CRHR2Q13324 411 aa12.16□□□□□ -0.46
NUP43-204ENST00000403890 ARHGEF6Q15052 776 aa12.16□□□□□ -0.46
NUP43-204ENST00000403890 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.16□□□□□ -0.46
NUP43-204ENST00000403890 TSPYL4Q9UJ04 414 aa12.16□□□□□ -0.46
NUP43-204ENST00000403890 CLSPNQ9HAW4 1339 aa12.15□□□□□ -0.46
NUP43-204ENST00000403890 IRS4O14654 1257 aaPredicted RBP12.15□□□□□ -0.46
NUP43-204ENST00000403890 MMP14P50281 582 aa12.15□□□□□ -0.46
NUP43-204ENST00000403890 RTL5Q5HYW3 569 aaPredicted RBP12.15□□□□□ -0.46
NUP43-204ENST00000403890 APOBEC3FQ8IUX4 373 aaKnown RBP12.15□□□□□ -0.46
NUP43-204ENST00000403890 DPF3Q92784 378 aa12.15□□□□□ -0.46
NUP43-204ENST00000403890 MARVELD3Q96A59 401 aa12.15□□□□□ -0.46
NUP43-204ENST00000403890 WNK4Q96J92 1243 aa12.15□□□□□ -0.46
NUP43-204ENST00000403890 EMP3P54852 163 aa12.14□□□□□ -0.47
NUP43-204ENST00000403890 CAP1Q01518 475 aa12.14□□□□□ -0.47
NUP43-204ENST00000403890 NFE2L2Q16236 605 aa12.14□□□□□ -0.47
NUP43-204ENST00000403890 MAP3K11Q16584 847 aa12.14□□□□□ -0.47
NUP43-204ENST00000403890 PLBD2Q8NHP8 589 aa12.14□□□□□ -0.47
NUP43-204ENST00000403890 ISCA1Q9BUE6 129 aa12.14□□□□□ -0.47
NUP43-204ENST00000403890 SEC31BQ9NQW1 1179 aa12.14□□□□□ -0.47
NUP43-204ENST00000403890 UNCXA6NJT0 531 aa12.13□□□□□ -0.47
NUP43-204ENST00000403890 ATP5J2-PTCD1G3V325 749 aa12.13□□□□□ -0.47
NUP43-204ENST00000403890 PPP1R12BO60237 982 aaPredicted RBP12.13□□□□□ -0.47
NUP43-204ENST00000403890 SASH1O94885 1247 aa12.13□□□□□ -0.47
NUP43-204ENST00000403890 MYCP01106 439 aaPredicted RBP12.13□□□□□ -0.47
NUP43-204ENST00000403890 ATP2B4P23634 1241 aa12.13□□□□□ -0.47
NUP43-204ENST00000403890 DACT2Q5SW24 774 aa12.13□□□□□ -0.47
NUP43-204ENST00000403890 ANKRD13DQ6ZTN6 518 aa12.13□□□□□ -0.47
NUP43-204ENST00000403890 CLMNQ96JQ2 1002 aa12.13□□□□□ -0.47
NUP43-204ENST00000403890 MXD3Q9BW11 206 aa12.13□□□□□ -0.47
NUP43-204ENST00000403890 FZD1Q9UP38 647 aa12.13□□□□□ -0.47
NUP43-204ENST00000403890 PTCH2Q9Y6C5 1203 aa12.13□□□□□ -0.47
NUP43-204ENST00000403890 COL6A3P12111 3177 aa12.13□□□□□ -0.47
NUP43-204ENST00000403890 COL4A1P02462 1669 aa12.13□□□□□ -0.47
NUP43-204ENST00000403890 XDHP47989 1333 aa12.12□□□□□ -0.47
NUP43-204ENST00000403890 MYO3BQ8WXR4 1341 aa12.12□□□□□ -0.47
NUP43-204ENST00000403890 WTIPA6NIX2 430 aaPredicted RBP12.12□□□□□ -0.47
NUP43-204ENST00000403890 HSP90B1P14625 803 aaKnown RBP12.12□□□□□ -0.47
NUP43-204ENST00000403890 PPP2R1AP30153 589 aa12.12□□□□□ -0.47
NUP43-204ENST00000403890 TRIM28Q13263 835 aaKnown RBP12.12□□□□□ -0.47
NUP43-204ENST00000403890 STRIP1Q5VSL9 837 aa12.12□□□□□ -0.47
NUP43-204ENST00000403890 PTPN18Q99952 460 aa12.12□□□□□ -0.47
NUP43-204ENST00000403890 DEFB129Q9H1M3 183 aa12.12□□□□□ -0.47
NUP43-204ENST00000403890 TESPA1A2RU30 521 aaPredicted RBP12.11□□□□□ -0.47
NUP43-204ENST00000403890 IFNLR1Q8IU57 520 aaPredicted RBP12.11□□□□□ -0.47
NUP43-204ENST00000403890 SPNS2Q8IVW8 549 aa12.11□□□□□ -0.47
NUP43-204ENST00000403890 FBXW7Q969H0 707 aa12.11□□□□□ -0.47
NUP43-204ENST00000403890 PLEKHF1Q96S99 279 aa12.11□□□□□ -0.47
NUP43-204ENST00000403890 PRO3102Q9H379 93 aa12.11□□□□□ -0.47
NUP43-204ENST00000403890 BABAM1Q9NWV8 329 aa12.11□□□□□ -0.47
NUP43-204ENST00000403890 PSME4Q14997 1843 aa12.1□□□□□ -0.47
NUP43-204ENST00000403890 MMRN1Q13201 1228 aa12.1□□□□□ -0.47
NUP43-204ENST00000403890 SUPT20HL1Q3ZLR7 823 aa12.1□□□□□ -0.47
NUP43-204ENST00000403890 CCDC152Q4G0S7 254 aa12.1□□□□□ -0.47
NUP43-204ENST00000403890 ANKRD18AQ8IVF6 992 aa12.1□□□□□ -0.47
NUP43-204ENST00000403890 BOLA1Q9Y3E2 137 aa12.1□□□□□ -0.47
NUP43-204ENST00000403890 GJA5P36382 358 aa12.09□□□□□ -0.47
NUP43-204ENST00000403890 KIAA0825Q8IV33 1275 aa12.09□□□□□ -0.47
NUP43-204ENST00000403890 ZBTB38Q8NAP3 1195 aaPredicted RBP12.09□□□□□ -0.47
NUP43-204ENST00000403890 SH3TC2Q8TF17 1288 aa12.09□□□□□ -0.47
NUP43-204ENST00000403890 ZBED3Q96IU2 234 aaPredicted RBP12.09□□□□□ -0.47
NUP43-204ENST00000403890 HTATIP2Q9BUP3 242 aa12.09□□□□□ -0.47
NUP43-204ENST00000403890 COA1Q9GZY4 146 aa12.09□□□□□ -0.47
NUP43-204ENST00000403890 ZFYVE28Q9HCC9 887 aa12.09□□□□□ -0.47
NUP43-204ENST00000403890 CHPF2Q9P2E5 772 aa12.09□□□□□ -0.47
NUP43-204ENST00000403890 NR2E3Q9Y5X4 410 aa12.09□□□□□ -0.47
NUP43-204ENST00000403890 DLG5Q8TDM6 1919 aa12.09□□□□□ -0.47
NUP43-204ENST00000403890 A0A1W2PPC1 479 aa12.08□□□□□ -0.48
NUP43-204ENST00000403890 IREB2P48200 963 aaKnown RBP12.08□□□□□ -0.48
NUP43-204ENST00000403890 TTLL5Q6EMB2 1281 aa12.08□□□□□ -0.48
NUP43-204ENST00000403890 PNNQ9H307 717 aaKnown RBP12.08□□□□□ -0.48
NUP43-204ENST00000403890 PPP2R3BQ9Y5P8 575 aa12.08□□□□□ -0.48
NUP43-204ENST00000403890 COL1A1P02452 1464 aaPredicted RBP12.08□□□□□ -0.48
NUP43-204ENST00000403890 MED23Q9ULK4 1368 aa12.07□□□□□ -0.48
NUP43-204ENST00000403890 PDE8AO60658 829 aa12.07□□□□□ -0.48
NUP43-204ENST00000403890 USP2O75604 605 aaPredicted RBP12.07□□□□□ -0.48
NUP43-204ENST00000403890 DLGAP5Q15398 846 aa12.07□□□□□ -0.48
NUP43-204ENST00000403890 TAF1CQ15572 869 aaPredicted RBP12.07□□□□□ -0.48
NUP43-204ENST00000403890 ANKRD13AQ8IZ07 590 aa12.07□□□□□ -0.48
NUP43-204ENST00000403890 NKX2-3Q8TAU0 364 aa12.07□□□□□ -0.48
NUP43-204ENST00000403890 CCDC85AQ96PX6 553 aaPredicted RBP12.07□□□□□ -0.48
NUP43-204ENST00000403890 MAPK8IP3Q9UPT6 1336 aa12.07□□□□□ -0.48
NUP43-204ENST00000403890 KIF22Q14807 665 aa12.06□□□□□ -0.48
NUP43-204ENST00000403890 SHISA4Q96DD7 197 aa12.06□□□□□ -0.48
NUP43-204ENST00000403890 MS4A4AQ96JQ5 239 aa12.06□□□□□ -0.48
NUP43-204ENST00000403890 PCGF6Q9BYE7 350 aa12.06□□□□□ -0.48
NUP43-204ENST00000403890 DBF4Q9UBU7 674 aaPredicted RBP12.06□□□□□ -0.48
NUP43-204ENST00000403890 SOX1O00570 391 aaPredicted RBP12.05□□□□□ -0.48
NUP43-204ENST00000403890 ZBTB7BO15156 539 aaPredicted RBP12.05□□□□□ -0.48
NUP43-204ENST00000403890 WDHD1O75717 1129 aaPredicted RBP12.05□□□□□ -0.48
NUP43-204ENST00000403890 GNRH1P01148 92 aa12.05□□□□□ -0.48
NUP43-204ENST00000403890 CCT4P50991 539 aaKnown RBP12.05□□□□□ -0.48
NUP43-204ENST00000403890 PRMT2P55345 433 aa12.05□□□□□ -0.48
NUP43-204ENST00000403890 KRT24Q2M2I5 525 aa12.05□□□□□ -0.48
NUP43-204ENST00000403890 NBPF12Q5TAG4 269 aaPredicted RBP12.05□□□□□ -0.48
NUP43-204ENST00000403890 HDGFL1Q5TGJ6 251 aa12.05□□□□□ -0.48
NUP43-204ENST00000403890 BRI3BPQ8WY22 251 aa12.05□□□□□ -0.48
NUP43-204ENST00000403890 OPTNQ96CV9 577 aa12.05□□□□□ -0.48
NUP43-204ENST00000403890 LRCH3Q96II8 777 aa12.05□□□□□ -0.48
NUP43-204ENST00000403890 CDC5LQ99459 802 aaKnown RBP12.05□□□□□ -0.48
NUP43-204ENST00000403890 BSDC1Q9NW68 430 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms