RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 ACRBPQ8NEB7 543 aa10.84□□□□□ -0.67
SMAD9-203ENST00000399275 NUP88Q99567 741 aaPredicted RBP10.84□□□□□ -0.67
SMAD9-203ENST00000399275 TCEAL9Q9UHQ7 104 aa10.84□□□□□ -0.67
SMAD9-203ENST00000399275 A0A087WUV0 522 aaPredicted RBP10.83□□□□□ -0.68
SMAD9-203ENST00000399275 RABEP2Q9H5N1 569 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 RBM26Q5T8P6 1007 aaKnown RBP10.83□□□□□ -0.68
SMAD9-203ENST00000399275 PPP1R14CQ8TAE6 165 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 MTUS1Q9ULD2 1270 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 NOS1P29475 1434 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 PBRM1Q86U86 1689 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 RHOXF2BP0C7M4 288 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 AK2P54819 239 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 UBASH3AP57075 661 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 ATP8B2P98198 1209 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 DYNC1I2Q13409 638 aaKnown RBP10.83□□□□□ -0.68
SMAD9-203ENST00000399275 CCDC96Q2M329 555 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 SYT10Q6XYQ8 523 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 CACNA2D4Q7Z3S7 1137 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 MEIS3Q99687 375 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 RHOXF2Q9BQY4 288 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 NUB1Q9Y5A7 615 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 ABCA5Q8WWZ7 1642 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 KIF24Q5T7B8 1368 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 ZNF521Q96K83 1311 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 SYT1P21579 422 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 CNNM3Q8NE01 707 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 MRPS27Q92552 414 aaKnown RBP10.83□□□□□ -0.68
SMAD9-203ENST00000399275 CCDC43Q96MW1 224 aaKnown RBP10.83□□□□□ -0.68
SMAD9-203ENST00000399275 NEK1Q96PY6 1258 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 CXorf56Q9H5V9 222 aa10.83□□□□□ -0.68
SMAD9-203ENST00000399275 CHMLP26374 656 aa10.82□□□□□ -0.68
SMAD9-203ENST00000399275 ZNF75DP51815 510 aa10.82□□□□□ -0.68
SMAD9-203ENST00000399275 CCDC152Q4G0S7 254 aa10.82□□□□□ -0.68
SMAD9-203ENST00000399275 ISM2Q6H9L7 571 aa10.82□□□□□ -0.68
SMAD9-203ENST00000399275 KCNG4Q8TDN1 519 aa10.82□□□□□ -0.68
SMAD9-203ENST00000399275 GKAP1Q5VSY0 366 aaPredicted RBP10.82□□□□□ -0.68
SMAD9-203ENST00000399275 ATL3Q6DD88 541 aa10.82□□□□□ -0.68
SMAD9-203ENST00000399275 AOPEPQ8N6M6 819 aa10.82□□□□□ -0.68
SMAD9-203ENST00000399275 FAM212AQ96EL1 285 aa10.82□□□□□ -0.68
SMAD9-203ENST00000399275 NUF2Q9BZD4 464 aa10.82□□□□□ -0.68
SMAD9-203ENST00000399275 CTAGE9A4FU28 777 aa10.82□□□□□ -0.68
SMAD9-203ENST00000399275 IRX5P78411 483 aaPredicted RBP10.82□□□□□ -0.68
SMAD9-203ENST00000399275 PHLDB3Q6NSJ2 640 aa10.82□□□□□ -0.68
SMAD9-203ENST00000399275 ARHGEF2Q92974 986 aaKnown RBP10.82□□□□□ -0.68
SMAD9-203ENST00000399275 TPD52L2O43399 206 aaKnown RBP10.82□□□□□ -0.68
SMAD9-203ENST00000399275 GTF2E1P29083 439 aaPredicted RBP10.82□□□□□ -0.68
SMAD9-203ENST00000399275 RHPN1Q8TCX5 695 aa10.82□□□□□ -0.68
SMAD9-203ENST00000399275 THEGQ9P2T0 379 aa10.82□□□□□ -0.68
SMAD9-203ENST00000399275 A2MP01023 1474 aa10.82□□□□□ -0.68
SMAD9-203ENST00000399275 PPP1R12AO14974 1030 aaPredicted RBP10.81□□□□□ -0.68
SMAD9-203ENST00000399275 KANK3Q6NY19 840 aa10.81□□□□□ -0.68
SMAD9-203ENST00000399275 RAPGEF4Q8WZA2 1011 aa10.81□□□□□ -0.68
SMAD9-203ENST00000399275 PIK3R4Q99570 1358 aa10.81□□□□□ -0.68
SMAD9-203ENST00000399275 HNRNPCP07910 306 aaKnown RBP eCLIP10.81□□□□□ -0.68
SMAD9-203ENST00000399275 TSHZ3Q63HK5 1081 aa10.81□□□□□ -0.68
SMAD9-203ENST00000399275 CARD14Q9BXL6 1004 aa10.81□□□□□ -0.68
SMAD9-203ENST00000399275 MACROD2A1Z1Q3 448 aa10.81□□□□□ -0.68
SMAD9-203ENST00000399275 PRC1O43663 620 aa10.81□□□□□ -0.68
SMAD9-203ENST00000399275 VAV2P52735 878 aa10.81□□□□□ -0.68
SMAD9-203ENST00000399275 TAF7Q15545 349 aaPredicted RBP10.81□□□□□ -0.68
SMAD9-203ENST00000399275 BAG1Q99933 345 aaPredicted RBP10.81□□□□□ -0.68
SMAD9-203ENST00000399275 PHAXQ9H814 394 aaKnown RBP10.81□□□□□ -0.68
SMAD9-203ENST00000399275 IMPACTQ9P2X3 320 aa10.81□□□□□ -0.68
SMAD9-203ENST00000399275 PPP1R9AQ9ULJ8 1098 aa10.81□□□□□ -0.68
SMAD9-203ENST00000399275 SCINQ9Y6U3 715 aa10.81□□□□□ -0.68
SMAD9-203ENST00000399275 ZFYVE9O95405 1425 aa10.81□□□□□ -0.68
SMAD9-203ENST00000399275 E2F5Q15329 346 aa10.81□□□□□ -0.68
SMAD9-203ENST00000399275 DDX54Q8TDD1 881 aaKnown RBP10.81□□□□□ -0.68
SMAD9-203ENST00000399275 BOLA2Q9H3K6 86 aa10.81□□□□□ -0.68
SMAD9-203ENST00000399275 GEMIN8Q9NWZ8 242 aaKnown RBP10.81□□□□□ -0.68
SMAD9-203ENST00000399275 AOX1Q06278 1338 aa10.81□□□□□ -0.68
SMAD9-203ENST00000399275 PPP1R7Q15435 360 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 GRAMD4Q6IC98 578 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 NECAB1Q8N987 351 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 MCUR1Q96AQ8 359 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 PUF60Q9UHX1 559 aaKnown RBP10.8□□□□□ -0.68
SMAD9-203ENST00000399275 EMILIN1Q9Y6C2 1016 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 CCDC61Q9Y6R9 512 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 TTC41PQ6P2S7 1318 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 SPECC1L-ADORA2AF8WAN1 911 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 LARP1Q6PKG0 1096 aaKnown RBP10.8□□□□□ -0.68
SMAD9-203ENST00000399275 GPT2Q8TD30 523 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 NACAP1Q9BZK3 213 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 CLSTN2Q9H4D0 955 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 MIS18AQ9NYP9 233 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 BIN1O00499 593 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 BLVRAP53004 296 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 GJC2Q5T442 439 aaPredicted RBP10.8□□□□□ -0.68
SMAD9-203ENST00000399275 PPP1R42Q7Z4L9 355 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 SDCCAG8Q86SQ7 713 aaPredicted RBP10.8□□□□□ -0.68
SMAD9-203ENST00000399275 C17orf53Q8N3J3 647 aaPredicted RBP10.8□□□□□ -0.68
SMAD9-203ENST00000399275 ATP2A3Q93084 1043 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 IQCGQ9H095 443 aaKnown RBP10.8□□□□□ -0.68
SMAD9-203ENST00000399275 SEPT10Q9P0V9 454 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 TTC21BQ7Z4L5 1316 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 MYO1CO00159 1063 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 ZNF131P52739 623 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 CCDC102BQ68D86 513 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 ARHGAP24Q8N264 748 aa10.8□□□□□ -0.68
SMAD9-203ENST00000399275 CCDC77Q9BR77 488 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms