RNA–Protein interactions for RNA: ENST00000398637.9

SLC38A1-201, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 8,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-201ENST00000398637 SSFA2P28290 1259 aa12.88□□□□□ -0.35
SLC38A1-201ENST00000398637 ERCC5P28715 1186 aaPredicted RBP12.88□□□□□ -0.35
SLC38A1-201ENST00000398637 NSD3Q9BZ95 1437 aa12.88□□□□□ -0.35
SLC38A1-201ENST00000398637 TTC6Q86TZ1 520 aa12.88□□□□□ -0.35
SLC38A1-201ENST00000398637 CCDC155Q8N6L0 562 aa12.88□□□□□ -0.35
SLC38A1-201ENST00000398637 WASLO00401 505 aaPredicted RBP12.88□□□□□ -0.35
SLC38A1-201ENST00000398637 PRPF6O94906 941 aaKnown RBP12.88□□□□□ -0.35
SLC38A1-201ENST00000398637 RYBPQ8N488 228 aaPredicted RBP12.88□□□□□ -0.35
SLC38A1-201ENST00000398637 AS3MTQ9HBK9 375 aa12.88□□□□□ -0.35
SLC38A1-201ENST00000398637 STK10O94804 968 aaKnown RBP12.88□□□□□ -0.35
SLC38A1-201ENST00000398637 SFPQP23246 707 aaKnown RBP eCLIP12.88□□□□□ -0.35
SLC38A1-201ENST00000398637 POLIQ9UNA4 740 aa12.88□□□□□ -0.35
SLC38A1-201ENST00000398637 TOP2AP11388 1531 aaKnown RBP12.88□□□□□ -0.35
SLC38A1-201ENST00000398637 SBNO2Q9Y2G9 1366 aa12.88□□□□□ -0.35
SLC38A1-201ENST00000398637 ZEB2O60315 1214 aa12.88□□□□□ -0.35
SLC38A1-201ENST00000398637 SESTD1Q86VW0 696 aa12.88□□□□□ -0.35
SLC38A1-201ENST00000398637 CALML3P27482 149 aa12.88□□□□□ -0.35
SLC38A1-201ENST00000398637 QTRT2Q9H974 415 aaKnown RBP12.88□□□□□ -0.35
SLC38A1-201ENST00000398637 MLXIPQ9HAP2 919 aa12.88□□□□□ -0.35
SLC38A1-201ENST00000398637 VIMP08670 466 aaKnown RBP12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 DCAF17Q5H9S7 520 aaPredicted RBP12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 GABPB2Q8TAK5 448 aaPredicted RBP12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 IRS4O14654 1257 aaPredicted RBP12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 TRAK2O60296 914 aa12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 ANXA1P04083 346 aa12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 PARP1P09874 1014 aaKnown RBP12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 ANO10Q9NW15 660 aa12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 FBF1Q8TES7 1133 aa12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 MRC2Q9UBG0 1479 aa12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 ZSCAN12O43309 604 aa12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 MUM1L1Q5H9M0 696 aa12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 NAP1L4Q99733 375 aaKnown RBP12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 FTOQ9C0B1 505 aaKnown RBP eCLIP12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 CNNM2Q9H8M5 875 aa12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 K7ELQ4 463 aaPredicted RBP12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 ATP2A2P16615 1042 aaKnown RBP12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 MCM3P25205 808 aa12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 MCM5P33992 734 aa12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 RASAL2Q9UJF2 1139 aa12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 ATF5Q9Y2D1 282 aaPredicted RBP12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 ATP6V0A2Q9Y487 856 aa12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 ZNF772Q68DY9 489 aaPredicted RBP12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 MICALL1Q8N3F8 863 aa12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 FAM204AQ9H8W3 233 aa12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 RMND1Q9NWS8 449 aa12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 TYW5A2RUC4 315 aaKnown RBP12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 TNFAIP1Q13829 316 aa12.87□□□□□ -0.35
SLC38A1-201ENST00000398637 FBXW4P57775 412 aa12.86□□□□□ -0.35
SLC38A1-201ENST00000398637 KRT79Q5XKE5 535 aa12.86□□□□□ -0.35
SLC38A1-201ENST00000398637 SLITRK6Q9H5Y7 841 aa12.86□□□□□ -0.35
SLC38A1-201ENST00000398637 SYNDIG1Q9H7V2 258 aa12.86□□□□□ -0.35
SLC38A1-201ENST00000398637 ITKQ08881 620 aa12.86□□□□□ -0.35
SLC38A1-201ENST00000398637 SLC9C2Q5TAH2 1124 aa12.86□□□□□ -0.35
SLC38A1-201ENST00000398637 ZBTB43O43298 467 aa12.86□□□□□ -0.35
SLC38A1-201ENST00000398637 UAP1Q16222 522 aaPredicted RBP12.86□□□□□ -0.35
SLC38A1-201ENST00000398637 AP5M1Q9H0R1 490 aa12.86□□□□□ -0.35
SLC38A1-201ENST00000398637 TMPOP42166 694 aaKnown RBP12.86□□□□□ -0.35
SLC38A1-201ENST00000398637 XAGE3Q8WTP9 111 aa12.86□□□□□ -0.35
SLC38A1-201ENST00000398637 RBM46Q8TBY0 533 aaKnown RBP12.86□□□□□ -0.35
SLC38A1-201ENST00000398637 EVI5LQ96CN4 794 aa12.86□□□□□ -0.35
SLC38A1-201ENST00000398637 TMEM106CQ9BVX2 250 aa12.86□□□□□ -0.35
SLC38A1-201ENST00000398637 ORC3Q9UBD5 711 aaPredicted RBP12.86□□□□□ -0.35
SLC38A1-201ENST00000398637 DIXDC1Q155Q3 683 aa12.86□□□□□ -0.35
SLC38A1-201ENST00000398637 GCNAQ96QF7 691 aa12.86□□□□□ -0.35
SLC38A1-201ENST00000398637 SELENOOQ9BVL4 669 aa12.86□□□□□ -0.35
SLC38A1-201ENST00000398637 PI4KAP2A4QPH2 592 aa12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 CKAP4Q07065 602 aaKnown RBP12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 KRT33BQ14525 404 aa12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 PI4KAP1Q8N8J0 262 aa12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 FSIP1Q8NA03 581 aa12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 WDR46O15213 610 aaKnown RBP12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 RRAGBQ5VZM2 374 aa12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 TMTC2Q8N394 836 aa12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 MAST3O60307 1309 aa12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 RAD50Q92878 1312 aa12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 AKR1B10O60218 316 aa12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 FMNL1O95466 1100 aaPredicted RBP12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 CCDC6Q16204 474 aa12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 KANK3Q6NY19 840 aa12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 RPS6KC1Q96S38 1066 aa12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 CCDC66A2RUB6 948 aa12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 RPAP2Q8IXW5 612 aaPredicted RBP12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 GBP3Q9H0R5 595 aa12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 ATP6V1E1P36543 226 aa12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 PRPHP41219 470 aa12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 WDR63Q8IWG1 891 aa12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 CCDC77Q9BR77 488 aa12.85□□□□□ -0.35
SLC38A1-201ENST00000398637 INF2Q27J81 1249 aa12.84□□□□□ -0.35
SLC38A1-201ENST00000398637 CDCA7LQ96GN5 454 aa12.84□□□□□ -0.35
SLC38A1-201ENST00000398637 DISP3Q9P2K9 1392 aa12.84□□□□□ -0.35
SLC38A1-201ENST00000398637 ACBD5Q5T8D3 534 aaPredicted RBP12.84□□□□□ -0.35
SLC38A1-201ENST00000398637 COPS6Q7L5N1 327 aa12.84□□□□□ -0.35
SLC38A1-201ENST00000398637 UBXN4Q92575 508 aa12.84□□□□□ -0.35
SLC38A1-201ENST00000398637 SLC7A5P2Q9GIP4 190 aa12.84□□□□□ -0.35
SLC38A1-201ENST00000398637 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.84□□□□□ -0.35
SLC38A1-201ENST00000398637 EMILIN1Q9Y6C2 1016 aa12.84□□□□□ -0.35
SLC38A1-201ENST00000398637 V9GYY5 206 aaPredicted RBP12.84□□□□□ -0.35
SLC38A1-201ENST00000398637 CAMSAP2Q08AD1 1489 aa12.84□□□□□ -0.35
SLC38A1-201ENST00000398637 MCM7P33993 719 aa12.84□□□□□ -0.35
SLC38A1-201ENST00000398637 ARMC9Q7Z3E5 817 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms