RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 COL1A1P02452 1464 aaPredicted RBP4.8□□□□□ -1.64
UBE3A-202ENST00000397954 RAB11FIP3O75154 756 aa4.8□□□□□ -1.64
UBE3A-202ENST00000397954 GIGYF1O75420 1035 aaPredicted RBP4.8□□□□□ -1.64
UBE3A-202ENST00000397954 GYS1P13807 737 aa4.8□□□□□ -1.64
UBE3A-202ENST00000397954 ITPK1Q13572 414 aa4.8□□□□□ -1.64
UBE3A-202ENST00000397954 TSGA10IPQ3SY00 556 aa4.8□□□□□ -1.64
UBE3A-202ENST00000397954 ICMTO60725 284 aa4.8□□□□□ -1.64
UBE3A-202ENST00000397954 ALDH1B1P30837 517 aa4.8□□□□□ -1.64
UBE3A-202ENST00000397954 TNNI2P48788 182 aa4.8□□□□□ -1.64
UBE3A-202ENST00000397954 FUT2Q10981 343 aa4.8□□□□□ -1.64
UBE3A-202ENST00000397954 ALDH1L2Q3SY69 923 aa4.8□□□□□ -1.64
UBE3A-202ENST00000397954 CCDC30Q5VVM6 783 aa4.8□□□□□ -1.64
UBE3A-202ENST00000397954 NOL8Q76FK4 1167 aaKnown RBP4.8□□□□□ -1.64
UBE3A-202ENST00000397954 SYTL4Q96C24 671 aaPredicted RBP4.8□□□□□ -1.64
UBE3A-202ENST00000397954 ASAP1Q9ULH1 1129 aa4.8□□□□□ -1.64
UBE3A-202ENST00000397954 CACNA1SQ13698 1873 aa4.8□□□□□ -1.64
UBE3A-202ENST00000397954 PTPRCP08575 1304 aa4.8□□□□□ -1.64
UBE3A-202ENST00000397954 POLRMTO00411 1230 aaKnown RBP4.79□□□□□ -1.64
UBE3A-202ENST00000397954 P4HBP07237 508 aaKnown RBP4.79□□□□□ -1.64
UBE3A-202ENST00000397954 HOXA10P31260 410 aaPredicted RBP4.79□□□□□ -1.64
UBE3A-202ENST00000397954 RIPK4P57078 832 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 TATDN2Q93075 761 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 CRAMP1Q96RY5 1269 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 TINF2Q9BSI4 451 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 ZNF646O15015 1829 aaPredicted RBP4.79□□□□□ -1.64
UBE3A-202ENST00000397954 ZBBXA8MT70 800 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 CAMTA2O94983 1202 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 GTF2F1P35269 517 aaKnown RBP eCLIP4.79□□□□□ -1.646e-11■■■■■ 42.3
UBE3A-202ENST00000397954 USP46P62068 366 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 CHRDL2Q6WN34 429 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 METTL16Q86W50 562 aaKnown RBP4.79□□□□□ -1.64
UBE3A-202ENST00000397954 PNMA1Q8ND90 353 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 MICAL1Q8TDZ2 1067 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 PLA2G12BQ9BX93 195 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 CHMP4BQ9H444 224 aaKnown RBP4.79□□□□□ -1.64
UBE3A-202ENST00000397954 PIF1Q9H611 641 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 PRKAG2Q9UGJ0 569 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 DNMT3AQ9Y6K1 912 aaPredicted RBP4.79□□□□□ -1.64
UBE3A-202ENST00000397954 ZNF521Q96K83 1311 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 CCDC88AQ3V6T2 1871 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 NUDT7P0C024 238 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 NPR1P16066 1061 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 CCDC144BQ3MJ40 725 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 SLFNL1Q499Z3 407 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 EAPPQ56P03 285 aaPredicted RBP4.79□□□□□ -1.64
UBE3A-202ENST00000397954 TPTE2Q6XPS3 522 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 RTKN2Q8IZC4 609 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 PLBD2Q8NHP8 589 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 GTF3C2Q8WUA4 911 aaPredicted RBP4.79□□□□□ -1.64
UBE3A-202ENST00000397954 PSMD1Q99460 953 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 TSPYL4Q9UJ04 414 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 DCTN4Q9UJW0 460 aa4.79□□□□□ -1.64
UBE3A-202ENST00000397954 KIF16BQ96L93 1317 aa4.78□□□□□ -1.64
UBE3A-202ENST00000397954 MAST2Q6P0Q8 1798 aa4.78□□□□□ -1.64
UBE3A-202ENST00000397954 SNED1Q8TER0 1413 aa4.78□□□□□ -1.64
UBE3A-202ENST00000397954 SCAMP3O14828 347 aaKnown RBP4.78□□□□□ -1.64
UBE3A-202ENST00000397954 ATMINO43313 823 aaPredicted RBP4.78□□□□□ -1.64
UBE3A-202ENST00000397954 HMOX1P09601 288 aa4.78□□□□□ -1.64
UBE3A-202ENST00000397954 SWI5Q1ZZU3 235 aa4.78□□□□□ -1.64
UBE3A-202ENST00000397954 CRY2Q49AN0 593 aa4.78□□□□□ -1.64
UBE3A-202ENST00000397954 MASTLQ96GX5 879 aa4.78□□□□□ -1.64
UBE3A-202ENST00000397954 ZNF496Q96IT1 587 aaPredicted RBP4.78□□□□□ -1.64
UBE3A-202ENST00000397954 PURBQ96QR8 312 aaKnown RBP4.78□□□□□ -1.64
UBE3A-202ENST00000397954 SYT17Q9BSW7 474 aa4.78□□□□□ -1.64
UBE3A-202ENST00000397954 PIM2Q9P1W9 311 aa4.78□□□□□ -1.64
UBE3A-202ENST00000397954 TRPM7Q96QT4 1865 aa4.78□□□□□ -1.64
UBE3A-202ENST00000397954 TNNT2P45379 298 aaPredicted RBP4.78□□□□□ -1.64
UBE3A-202ENST00000397954 ZNF34Q8IZ26 560 aa4.78□□□□□ -1.64
UBE3A-202ENST00000397954 PLPP7Q8NBV4 271 aa4.78□□□□□ -1.64
UBE3A-202ENST00000397954 CCDC191Q8NCU4 936 aa4.78□□□□□ -1.64
UBE3A-202ENST00000397954 ARHGAP45Q92619 1136 aa4.78□□□□□ -1.64
UBE3A-202ENST00000397954 SLC4A9Q96Q91 983 aa4.78□□□□□ -1.64
UBE3A-202ENST00000397954 SETDB2Q96T68 719 aa4.78□□□□□ -1.64
UBE3A-202ENST00000397954 ATP5J2-PTCD1G3V325 749 aa4.77□□□□□ -1.65
UBE3A-202ENST00000397954 C21orf2O43822 256 aa4.77□□□□□ -1.65
UBE3A-202ENST00000397954 DKK1O94907 266 aa4.77□□□□□ -1.65
UBE3A-202ENST00000397954 AAMPQ13685 434 aa4.77□□□□□ -1.65
UBE3A-202ENST00000397954 DZIP3Q86Y13 1208 aaKnown RBP4.77□□□□□ -1.65
UBE3A-202ENST00000397954 DNAJC10Q8IXB1 793 aa4.77□□□□□ -1.65
UBE3A-202ENST00000397954 PHACTR3Q96KR7 559 aa4.77□□□□□ -1.65
UBE3A-202ENST00000397954 ACBD3Q9H3P7 528 aa4.77□□□□□ -1.65
UBE3A-202ENST00000397954 LGR6Q9HBX8 967 aa4.77□□□□□ -1.65
UBE3A-202ENST00000397954 CXXC1Q9P0U4 656 aaPredicted RBP4.77□□□□□ -1.65
UBE3A-202ENST00000397954 MYH13Q9UKX3 1938 aa4.77□□□□□ -1.65
UBE3A-202ENST00000397954 H0YIN7 160 aa4.77□□□□□ -1.65
UBE3A-202ENST00000397954 ALDH1L1O75891 902 aa4.77□□□□□ -1.65
UBE3A-202ENST00000397954 DDX10Q13206 875 aaKnown RBP4.77□□□□□ -1.65
UBE3A-202ENST00000397954 TAS1R3Q7RTX0 852 aa4.77□□□□□ -1.65
UBE3A-202ENST00000397954 LRP10Q7Z4F1 713 aa4.77□□□□□ -1.65
UBE3A-202ENST00000397954 ZNF592Q92610 1267 aa4.77□□□□□ -1.65
UBE3A-202ENST00000397954 VTI1AQ96AJ9 217 aa4.77□□□□□ -1.65
UBE3A-202ENST00000397954 RBM17Q96I25 401 aaKnown RBP4.77□□□□□ -1.65
UBE3A-202ENST00000397954 RTFDC1Q9BY42 306 aaPredicted RBP4.77□□□□□ -1.65
UBE3A-202ENST00000397954 TMX4Q9H1E5 349 aaPredicted RBP4.77□□□□□ -1.65
UBE3A-202ENST00000397954 TAF1P21675 1872 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 BBOX1O75936 387 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 FKBP1AP62942 108 aaKnown RBP4.76□□□□□ -1.65
UBE3A-202ENST00000397954 FSTL1Q12841 308 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 PROX2Q3B8N5 592 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 DALRD3Q5D0E6 543 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms