RNA–Protein interactions for RNA: ENST00000397459.6

CNTN4-201, Transcript of contactin 4, humanhuman

TSL 1 (best) BASIC

Gene CNTN4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-201ENST00000397459 MORC2Q9Y6X9 1032 aaPredicted RBP9.47□□□□□ -0.89
CNTN4-201ENST00000397459 CARMIL3Q8ND23 1372 aa9.47□□□□□ -0.89
CNTN4-201ENST00000397459 GOLGA6L9A6NEM1 432 aa9.47□□□□□ -0.89
CNTN4-201ENST00000397459 JAK2O60674 1132 aa9.47□□□□□ -0.89
CNTN4-201ENST00000397459 SKILP12757 684 aa9.47□□□□□ -0.89
CNTN4-201ENST00000397459 CASP7P55210 303 aa9.47□□□□□ -0.89
CNTN4-201ENST00000397459 AIMP1Q12904 312 aaKnown RBP9.47□□□□□ -0.89
CNTN4-201ENST00000397459 STK3Q13188 491 aa9.47□□□□□ -0.89
CNTN4-201ENST00000397459 SNW1Q13573 536 aaKnown RBP9.47□□□□□ -0.89
CNTN4-201ENST00000397459 IMMTQ16891 758 aaKnown RBP9.47□□□□□ -0.89
CNTN4-201ENST00000397459 CPLX2Q6PUV4 134 aaKnown RBP9.47□□□□□ -0.89
CNTN4-201ENST00000397459 C17orf53Q8N3J3 647 aaPredicted RBP9.47□□□□□ -0.89
CNTN4-201ENST00000397459 FSIP1Q8NA03 581 aa9.47□□□□□ -0.89
CNTN4-201ENST00000397459 CCDC191Q8NCU4 936 aa9.47□□□□□ -0.89
CNTN4-201ENST00000397459 C16orf45Q96MC5 204 aaPredicted RBP9.47□□□□□ -0.89
CNTN4-201ENST00000397459 LAMA4Q16363 1823 aa9.46□□□□□ -0.89
CNTN4-201ENST00000397459 A0A087WZG4 1122 aa9.46□□□□□ -0.9
CNTN4-201ENST00000397459 SLU7O95391 586 aaKnown RBP9.46□□□□□ -0.9
CNTN4-201ENST00000397459 ME1P48163 572 aa9.46□□□□□ -0.9
CNTN4-201ENST00000397459 NKX1-1Q15270 411 aaPredicted RBP9.46□□□□□ -0.9
CNTN4-201ENST00000397459 FMR1NBQ8N0W7 255 aaPredicted RBP9.46□□□□□ -0.9
CNTN4-201ENST00000397459 CCAR2Q8N163 923 aaKnown RBP9.46□□□□□ -0.9
CNTN4-201ENST00000397459 DDX54Q8TDD1 881 aaKnown RBP9.46□□□□□ -0.9
CNTN4-201ENST00000397459 DNAJC2Q99543 621 aaKnown RBP9.46□□□□□ -0.9
CNTN4-201ENST00000397459 CWC25Q9NXE8 425 aaPredicted RBP9.46□□□□□ -0.9
CNTN4-201ENST00000397459 KIAA1468Q9P260 1216 aa9.46□□□□□ -0.9
CNTN4-201ENST00000397459 HOOK1Q9UJC3 728 aaKnown RBP9.46□□□□□ -0.9
CNTN4-201ENST00000397459 SHANK3Q9BYB0 1731 aa9.46□□□□□ -0.9
CNTN4-201ENST00000397459 CCDC69A6NI79 296 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 E7EWF7 191 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 EYA2O00167 538 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 PDIA3P30101 505 aaKnown RBP9.45□□□□□ -0.9
CNTN4-201ENST00000397459 NLRP12P59046 1061 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 STK38Q15208 465 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 SF3A1Q15459 793 aaKnown RBP9.45□□□□□ -0.9
CNTN4-201ENST00000397459 SYNE3Q6ZMZ3 975 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 DHX40Q8IX18 779 aaKnown RBP9.45□□□□□ -0.9
CNTN4-201ENST00000397459 KRT222Q8N1A0 295 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 DBNDD2Q9BQY9 259 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 SDF4Q9BRK5 362 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 CHMP3Q9Y3E7 222 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 USP16Q9Y5T5 823 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 COL22A1Q8NFW1 1626 aaPredicted RBP9.45□□□□□ -0.9
CNTN4-201ENST00000397459 ATP8B1O43520 1251 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 SFPQP23246 707 aaKnown RBP eCLIP9.45□□□□□ -0.9
CNTN4-201ENST00000397459 CMA1P23946 247 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 CCZ1BP86790 482 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 CCZ1P86791 482 aaPredicted RBP9.45□□□□□ -0.9
CNTN4-201ENST00000397459 CT47A1Q5JQC4 288 aaPredicted RBP9.45□□□□□ -0.9
CNTN4-201ENST00000397459 EPHA10Q5JZY3 1008 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 CCDC158Q5M9N0 1113 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 FAM173BQ6P4H8 233 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 UBE3BQ7Z3V4 1068 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 LINC00301Q8NCQ3 95 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 CNKSR2Q8WXI2 1034 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 USP28Q96RU2 1077 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 L2HGDHQ9H9P8 463 aa9.45□□□□□ -0.9
CNTN4-201ENST00000397459 NUP188Q5SRE5 1749 aa9.44□□□□□ -0.9
CNTN4-201ENST00000397459 FAM237AA0A1B0GTK4 181 aa9.44□□□□□ -0.9
CNTN4-201ENST00000397459 ERVV-2B6SEH9 535 aa9.44□□□□□ -0.9
CNTN4-201ENST00000397459 PPP6R2O75170 966 aa9.44□□□□□ -0.9
CNTN4-201ENST00000397459 SLC3A2P08195 630 aaKnown RBP9.44□□□□□ -0.9
CNTN4-201ENST00000397459 IFIT1P09914 478 aaKnown RBP9.44□□□□□ -0.9
CNTN4-201ENST00000397459 HSPD1P10809 573 aaKnown RBP9.44□□□□□ -0.9
CNTN4-201ENST00000397459 TUBB4BP68371 445 aa9.44□□□□□ -0.9
CNTN4-201ENST00000397459 C8orf76Q96K31 380 aa9.44□□□□□ -0.9
CNTN4-201ENST00000397459 ZNF512BQ96KM6 892 aaPredicted RBP9.44□□□□□ -0.9
CNTN4-201ENST00000397459 ARGLU1Q9NWB6 273 aaPredicted RBP9.44□□□□□ -0.9
CNTN4-201ENST00000397459 COL14A1Q05707 1796 aaKnown RBP9.44□□□□□ -0.9
CNTN4-201ENST00000397459 PHLPP2Q6ZVD8 1323 aa9.44□□□□□ -0.9
CNTN4-201ENST00000397459 COL16A1Q07092 1604 aaPredicted RBP9.44□□□□□ -0.9
CNTN4-201ENST00000397459 DDX60Q8IY21 1712 aaKnown RBP9.44□□□□□ -0.9
CNTN4-201ENST00000397459 CCDC66A2RUB6 948 aa9.44□□□□□ -0.9
CNTN4-201ENST00000397459 SPTLC2O15270 562 aa9.44□□□□□ -0.9
CNTN4-201ENST00000397459 CTDNEP1O95476 244 aa9.44□□□□□ -0.9
CNTN4-201ENST00000397459 MYL6BP14649 208 aa9.44□□□□□ -0.9
CNTN4-201ENST00000397459 LRMPQ12912 555 aa9.44□□□□□ -0.9
CNTN4-201ENST00000397459 C11orf57Q6ZUT1 292 aaPredicted RBP9.44□□□□□ -0.9
CNTN4-201ENST00000397459 FBXO18Q8NFZ0 1043 aa9.44□□□□□ -0.9
CNTN4-201ENST00000397459 NCOA7Q8NI08 942 aa9.44□□□□□ -0.9
CNTN4-201ENST00000397459 CCDC34Q96HJ3 373 aa9.44□□□□□ -0.9
CNTN4-201ENST00000397459 TCEANC2Q96MN5 208 aa9.44□□□□□ -0.9
CNTN4-201ENST00000397459 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.44□□□□□ -0.9
CNTN4-201ENST00000397459 ZMYM6O95789 1325 aa9.44□□□□□ -0.9
CNTN4-201ENST00000397459 GLI3P10071 1580 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 CBX1P83916 185 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 STOX1Q6ZVD7 989 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 FILIP1Q7Z7B0 1213 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 RALYLQ86SE5 291 aaKnown RBP9.43□□□□□ -0.9
CNTN4-201ENST00000397459 MPNDQ8N594 471 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 APPBP2Q92624 585 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 DDX11Q96FC9 970 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 MTA3Q9BTC8 594 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 BCCIPQ9P287 314 aaKnown RBP eCLIP9.43□□□□□ -0.9
CNTN4-201ENST00000397459 DACH1Q9UI36 760 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 PCDHA7Q9UN72 937 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 ATRNO75882 1429 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 UBR2Q8IWV8 1755 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 MAST3O60307 1309 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 CPLX1O14810 134 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms