RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 NFKBIEO00221 500 aa18.01■□□□□ 0.47
CAPN3-207ENST00000397200 FRAT2O75474 233 aaPredicted RBP18.01■□□□□ 0.47
CAPN3-207ENST00000397200 AOC3Q16853 763 aa18.01■□□□□ 0.47
CAPN3-207ENST00000397200 COA1Q9GZY4 146 aa18.01■□□□□ 0.47
CAPN3-207ENST00000397200 VPS33BQ9H267 617 aa18.01■□□□□ 0.47
CAPN3-207ENST00000397200 LTBP3Q9NS15 1303 aa18.01■□□□□ 0.47
CAPN3-207ENST00000397200 GOLGB1Q14789 3259 aaKnown RBP18.01■□□□□ 0.47
CAPN3-207ENST00000397200 AKAP11Q9UKA4 1901 aa18.01■□□□□ 0.47
CAPN3-207ENST00000397200 YBX3P16989 372 aaKnown RBP eCLIP18.01■□□□□ 0.47
CAPN3-207ENST00000397200 ARHGAP27Q6ZUM4 889 aa18.01■□□□□ 0.47
CAPN3-207ENST00000397200 CD209Q9NNX6 404 aa18.01■□□□□ 0.47
CAPN3-207ENST00000397200 IQSEC3Q9UPP2 1182 aaPredicted RBP18.01■□□□□ 0.47
CAPN3-207ENST00000397200 SEMA3EO15041 775 aa18■□□□□ 0.47
CAPN3-207ENST00000397200 REC8O95072 547 aa18■□□□□ 0.47
CAPN3-207ENST00000397200 MCAMP43121 646 aa18■□□□□ 0.47
CAPN3-207ENST00000397200 RASGRF1Q13972 1273 aa18■□□□□ 0.47
CAPN3-207ENST00000397200 GPR162Q16538 588 aa18■□□□□ 0.47
CAPN3-207ENST00000397200 DOK7Q18PE1 504 aa18■□□□□ 0.47
CAPN3-207ENST00000397200 LARGE2Q8N3Y3 721 aa18■□□□□ 0.47
CAPN3-207ENST00000397200 DNAJC2Q99543 621 aaKnown RBP18■□□□□ 0.47
CAPN3-207ENST00000397200 HAUS7Q99871 368 aa18■□□□□ 0.47
CAPN3-207ENST00000397200 DENND2AQ9ULE3 1009 aa18■□□□□ 0.47
CAPN3-207ENST00000397200 IL1R1P14778 569 aa17.99■□□□□ 0.47
CAPN3-207ENST00000397200 IARSP41252 1262 aaKnown RBP17.99■□□□□ 0.47
CAPN3-207ENST00000397200 RASSF7Q02833 373 aa17.99■□□□□ 0.47
CAPN3-207ENST00000397200 SCARF1Q14162 830 aa17.99■□□□□ 0.47
CAPN3-207ENST00000397200 SPATA5Q8NB90 893 aa17.99■□□□□ 0.47
CAPN3-207ENST00000397200 TDRD7Q8NHU6 1098 aaKnown RBP17.99■□□□□ 0.47
CAPN3-207ENST00000397200 DBNDD1Q9H9R9 158 aa17.99■□□□□ 0.47
CAPN3-207ENST00000397200 SNRKQ9NRH2 765 aa17.99■□□□□ 0.47
CAPN3-207ENST00000397200 CCDC88AQ3V6T2 1871 aa17.99■□□□□ 0.47
CAPN3-207ENST00000397200 CHD4Q14839 1912 aa17.99■□□□□ 0.47
CAPN3-207ENST00000397200 MAP4K4O95819 1239 aaPredicted RBP17.98■□□□□ 0.47
CAPN3-207ENST00000397200 DDIT3P35638 169 aa17.98■□□□□ 0.47
CAPN3-207ENST00000397200 HMG20BQ9P0W2 317 aa17.98■□□□□ 0.47
CAPN3-207ENST00000397200 NDUFB9Q9Y6M9 179 aa17.98■□□□□ 0.47
CAPN3-207ENST00000397200 TRIM6-TRIM34B2RNG4 842 aa17.98■□□□□ 0.47
CAPN3-207ENST00000397200 ZBTB22O15209 634 aa17.98■□□□□ 0.47
CAPN3-207ENST00000397200 EPB41L2O43491 1005 aaKnown RBP17.98■□□□□ 0.47
CAPN3-207ENST00000397200 ECE2O60344 883 aa17.98■□□□□ 0.47
CAPN3-207ENST00000397200 ZAP70P43403 619 aa17.98■□□□□ 0.47
CAPN3-207ENST00000397200 RABEP1Q15276 862 aa17.98■□□□□ 0.47
CAPN3-207ENST00000397200 PI16Q6UXB8 463 aa17.98■□□□□ 0.47
CAPN3-207ENST00000397200 PODNQ7Z5L7 613 aa17.98■□□□□ 0.47
CAPN3-207ENST00000397200 ESYT1Q9BSJ8 1104 aa17.98■□□□□ 0.47
CAPN3-207ENST00000397200 PDS5AQ29RF7 1337 aaKnown RBP17.97■□□□□ 0.47
CAPN3-207ENST00000397200 CHMLP26374 656 aa17.97■□□□□ 0.47
CAPN3-207ENST00000397200 CHAF1AQ13111 956 aaPredicted RBP17.97■□□□□ 0.47
CAPN3-207ENST00000397200 SLKQ9H2G2 1235 aaPredicted RBP17.97■□□□□ 0.47
CAPN3-207ENST00000397200 PAG1Q9NWQ8 432 aa17.97■□□□□ 0.47
CAPN3-207ENST00000397200 COL1A1P02452 1464 aaPredicted RBP17.97■□□□□ 0.47
CAPN3-207ENST00000397200 GOLIM4O00461 696 aa17.96■□□□□ 0.47
CAPN3-207ENST00000397200 NIM1KQ8IY84 436 aa17.96■□□□□ 0.47
CAPN3-207ENST00000397200 CNTROBQ8N137 903 aa17.96■□□□□ 0.47
CAPN3-207ENST00000397200 JDP2Q8WYK2 163 aa17.96■□□□□ 0.47
CAPN3-207ENST00000397200 RILPL2Q969X0 211 aa17.96■□□□□ 0.47
CAPN3-207ENST00000397200 IL17RAQ96F46 866 aa17.96■□□□□ 0.47
CAPN3-207ENST00000397200 SBF1O95248 1867 aa17.95■□□□□ 0.46
CAPN3-207ENST00000397200 GRIN3BO60391 1043 aa17.95■□□□□ 0.46
CAPN3-207ENST00000397200 COL4A5P29400 1685 aa17.95■□□□□ 0.46
CAPN3-207ENST00000397200 DICER1Q9UPY3 1922 aaKnown RBP17.94■□□□□ 0.46
CAPN3-207ENST00000397200 CD2BP2O95400 341 aaKnown RBP17.94■□□□□ 0.46
CAPN3-207ENST00000397200 TTF1Q15361 905 aaPredicted RBP17.94■□□□□ 0.46
CAPN3-207ENST00000397200 FBXW7Q969H0 707 aa17.94■□□□□ 0.46
CAPN3-207ENST00000397200 EVI5LQ96CN4 794 aa17.94■□□□□ 0.46
CAPN3-207ENST00000397200 EDC3Q96F86 508 aaKnown RBP17.94■□□□□ 0.46
CAPN3-207ENST00000397200 SCN9AQ15858 1988 aa17.94■□□□□ 0.46
CAPN3-207ENST00000397200 K7ELQ4 463 aaPredicted RBP17.94■□□□□ 0.46
CAPN3-207ENST00000397200 CYP2E1P05181 493 aaPredicted RBP17.94■□□□□ 0.46
CAPN3-207ENST00000397200 LMNB1P20700 586 aa17.94■□□□□ 0.46
CAPN3-207ENST00000397200 WDR66Q8TBY9 1149 aa17.94■□□□□ 0.46
CAPN3-207ENST00000397200 CHMP5Q9NZZ3 219 aa17.94■□□□□ 0.46
CAPN3-207ENST00000397200 JAG2Q9Y219 1238 aa17.94■□□□□ 0.46
CAPN3-207ENST00000397200 FAM205AQ6ZU69 1335 aa17.93■□□□□ 0.46
CAPN3-207ENST00000397200 PSME4Q14997 1843 aa17.93■□□□□ 0.46
CAPN3-207ENST00000397200 PRELPP51888 382 aa17.93■□□□□ 0.46
CAPN3-207ENST00000397200 GTF2IP78347 998 aa17.93■□□□□ 0.46
CAPN3-207ENST00000397200 ZNRF3Q9ULT6 936 aa17.93■□□□□ 0.46
CAPN3-207ENST00000397200 MYO5AQ9Y4I1 1855 aaKnown RBP17.93■□□□□ 0.46
CAPN3-207ENST00000397200 DOCK2Q92608 1830 aa17.92■□□□□ 0.46
CAPN3-207ENST00000397200 TTLL5Q6EMB2 1281 aa17.92■□□□□ 0.46
CAPN3-207ENST00000397200 ZGPATQ8N5A5 531 aaKnown RBP17.92■□□□□ 0.46
CAPN3-207ENST00000397200 TBC1D22AQ8WUA7 517 aa17.92■□□□□ 0.46
CAPN3-207ENST00000397200 FSD1Q9BTV5 496 aa17.92■□□□□ 0.46
CAPN3-207ENST00000397200 ABCF2Q9UG63 623 aa17.92■□□□□ 0.46
CAPN3-207ENST00000397200 MYH7P12883 1935 aa17.92■□□□□ 0.46
CAPN3-207ENST00000397200 YDJCA8MPS7 323 aa17.91■□□□□ 0.46
CAPN3-207ENST00000397200 KBTBD3Q8NAB2 608 aa17.91■□□□□ 0.46
CAPN3-207ENST00000397200 PIH1D3Q9NQM4 214 aaKnown RBP17.91■□□□□ 0.46
CAPN3-207ENST00000397200 CIZ1Q9ULV3 898 aaPredicted RBP17.91■□□□□ 0.46
CAPN3-207ENST00000397200 SALL1Q9NSC2 1324 aa17.91■□□□□ 0.46
CAPN3-207ENST00000397200 USP17L3A6NCW0 530 aa17.9■□□□□ 0.46
CAPN3-207ENST00000397200 USP17L4A6NCW7 530 aa17.9■□□□□ 0.46
CAPN3-207ENST00000397200 STRIP1Q5VSL9 837 aa17.9■□□□□ 0.46
CAPN3-207ENST00000397200 USP17L1Q7RTZ2 530 aa17.9■□□□□ 0.46
CAPN3-207ENST00000397200 KCNQ5Q9NR82 932 aa17.9■□□□□ 0.46
CAPN3-207ENST00000397200 LRP2BPQ9P2M1 347 aa17.9■□□□□ 0.46
CAPN3-207ENST00000397200 ZNF646O15015 1829 aaPredicted RBP17.9■□□□□ 0.46
CAPN3-207ENST00000397200 IDH1O75874 414 aaKnown RBP17.9■□□□□ 0.46
CAPN3-207ENST00000397200 ANAPC15P60006 121 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms