RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 ZFYVE1Q9HBF4 777 aa7.62□□□□□ -1.19
HMGB1P10-201ENST00000395823 SENP2Q9HC62 589 aa7.62□□□□□ -1.19
HMGB1P10-201ENST00000395823 NAGPAQ9UK23 515 aa7.62□□□□□ -1.19
HMGB1P10-201ENST00000395823 PPFIA3O75145 1194 aa7.61□□□□□ -1.19
HMGB1P10-201ENST00000395823 PCNX4Q63HM2 1172 aa7.61□□□□□ -1.19
HMGB1P10-201ENST00000395823 GOLM1Q8NBJ4 401 aa7.61□□□□□ -1.19
HMGB1P10-201ENST00000395823 OSBPL2Q9H1P3 480 aa7.61□□□□□ -1.19
HMGB1P10-201ENST00000395823 IGFLR1Q9H665 355 aa7.61□□□□□ -1.19
HMGB1P10-201ENST00000395823 ZNF408Q9H9D4 720 aa7.61□□□□□ -1.19
HMGB1P10-201ENST00000395823 KLF15Q9UIH9 416 aa7.61□□□□□ -1.19
HMGB1P10-201ENST00000395823 PHF24Q9UPV7 400 aa7.61□□□□□ -1.19
HMGB1P10-201ENST00000395823 SUPT16HQ9Y5B9 1047 aaKnown RBP7.61□□□□□ -1.19
HMGB1P10-201ENST00000395823 SIN3BO75182 1162 aa7.6□□□□□ -1.19
HMGB1P10-201ENST00000395823 PCBP4P57723 403 aaKnown RBP7.6□□□□□ -1.19
HMGB1P10-201ENST00000395823 SERINC3Q13530 473 aa7.6□□□□□ -1.19
HMGB1P10-201ENST00000395823 NEUROD1Q13562 356 aa7.6□□□□□ -1.19
HMGB1P10-201ENST00000395823 SNAP47Q5SQN1 464 aa7.6□□□□□ -1.19
HMGB1P10-201ENST00000395823 VN1R5Q7Z5H4 357 aa7.6□□□□□ -1.19
HMGB1P10-201ENST00000395823 VWA5B2Q8N398 1253 aa7.6□□□□□ -1.19
HMGB1P10-201ENST00000395823 MDFIQ99750 246 aa7.6□□□□□ -1.19
HMGB1P10-201ENST00000395823 UBE2OQ9C0C9 1292 aaKnown RBP7.6□□□□□ -1.19
HMGB1P10-201ENST00000395823 ZSWIM4Q9H7M6 989 aa7.6□□□□□ -1.19
HMGB1P10-201ENST00000395823 EIF2AK2P19525 551 aaKnown RBP7.59□□□□□ -1.19
HMGB1P10-201ENST00000395823 ETFBP38117 255 aa7.59□□□□□ -1.19
HMGB1P10-201ENST00000395823 ZNF157P51786 506 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P10-201ENST00000395823 RPS26P62854 115 aaKnown RBP7.59□□□□□ -1.19
HMGB1P10-201ENST00000395823 TBC1D8BQ0IIM8 1120 aa7.59□□□□□ -1.19
HMGB1P10-201ENST00000395823 ZNF423Q2M1K9 1284 aa7.59□□□□□ -1.19
HMGB1P10-201ENST00000395823 BNC2Q6ZN30 1099 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P10-201ENST00000395823 FAM196AQ6ZSG2 479 aa7.59□□□□□ -1.19
HMGB1P10-201ENST00000395823 FBXO27Q8NI29 283 aa7.59□□□□□ -1.19
HMGB1P10-201ENST00000395823 STK35Q8TDR2 534 aa7.59□□□□□ -1.19
HMGB1P10-201ENST00000395823 TMEM39AQ9NV64 488 aa7.59□□□□□ -1.19
HMGB1P10-201ENST00000395823 GPN3Q9UHW5 284 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P10-201ENST00000395823 PRR12Q9ULL5 1215 aa7.59□□□□□ -1.19
HMGB1P10-201ENST00000395823 SLC6A14Q9UN76 642 aa7.59□□□□□ -1.19
HMGB1P10-201ENST00000395823 SOX13Q9UN79 622 aa7.59□□□□□ -1.19
HMGB1P10-201ENST00000395823 PCDHB5Q9Y5E4 795 aa7.59□□□□□ -1.19
HMGB1P10-201ENST00000395823 CDC14CA4D256 554 aa7.58□□□□□ -1.2
HMGB1P10-201ENST00000395823 B3GALT4O96024 378 aa7.58□□□□□ -1.2
HMGB1P10-201ENST00000395823 F13A1P00488 732 aa7.58□□□□□ -1.2
HMGB1P10-201ENST00000395823 GHRHP01286 108 aa7.58□□□□□ -1.2
HMGB1P10-201ENST00000395823 CPB1P15086 417 aa7.58□□□□□ -1.2
HMGB1P10-201ENST00000395823 BMP6P22004 513 aa7.58□□□□□ -1.2
HMGB1P10-201ENST00000395823 PCDH1Q08174 1060 aa7.58□□□□□ -1.2
HMGB1P10-201ENST00000395823 APOBRQ0VD83 1088 aa7.58□□□□□ -1.2
HMGB1P10-201ENST00000395823 NFX1Q12986 1120 aaKnown RBP7.58□□□□□ -1.2
HMGB1P10-201ENST00000395823 LAPTM4AQ15012 233 aa7.58□□□□□ -1.2
HMGB1P10-201ENST00000395823 PERM1Q5SV97 790 aa7.58□□□□□ -1.2
HMGB1P10-201ENST00000395823 SOGA3Q5TF21 947 aa7.58□□□□□ -1.2
HMGB1P10-201ENST00000395823 CEP135Q66GS9 1140 aa7.58□□□□□ -1.2
HMGB1P10-201ENST00000395823 SLITRK4Q8IW52 837 aa7.58□□□□□ -1.2
HMGB1P10-201ENST00000395823 TRIM42Q8IWZ5 723 aa7.58□□□□□ -1.2
HMGB1P10-201ENST00000395823 BSNDQ8WZ55 320 aa7.58□□□□□ -1.2
HMGB1P10-201ENST00000395823 PLD4Q96BZ4 506 aa7.58□□□□□ -1.2
HMGB1P10-201ENST00000395823 CLEC4MQ9H2X3 399 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P10-201ENST00000395823 TBX22Q9Y458 520 aa7.58□□□□□ -1.2
HMGB1P10-201ENST00000395823 MRVI1Q9Y6F6 885 aa7.58□□□□□ -1.2
HMGB1P10-201ENST00000395823 FAM221AA4D161 298 aa7.57□□□□□ -1.2
HMGB1P10-201ENST00000395823 SSBP05455 408 aaKnown RBP eCLIP7.57□□□□□ -1.2
HMGB1P10-201ENST00000395823 GAS6Q14393 721 aa7.57□□□□□ -1.2
HMGB1P10-201ENST00000395823 BMS1Q14692 1282 aaKnown RBP7.57□□□□□ -1.2
HMGB1P10-201ENST00000395823 KANK3Q6NY19 840 aa7.57□□□□□ -1.2
HMGB1P10-201ENST00000395823 FAM35AQ86V20 835 aa7.57□□□□□ -1.2
HMGB1P10-201ENST00000395823 NANOS1Q8WY41 292 aaKnown RBP7.57□□□□□ -1.2
HMGB1P10-201ENST00000395823 TNFRSF25Q93038 417 aa7.57□□□□□ -1.2
HMGB1P10-201ENST00000395823 TRERF1Q96PN7 1200 aa7.57□□□□□ -1.2
HMGB1P10-201ENST00000395823 LRRC3Q9BY71 257 aa7.57□□□□□ -1.2
HMGB1P10-201ENST00000395823 TRIM33Q9UPN9 1127 aa7.57□□□□□ -1.2
HMGB1P10-201ENST00000395823 TLR3O15455 904 aaKnown RBP7.56□□□□□ -1.2
HMGB1P10-201ENST00000395823 KLF4O43474 513 aa7.56□□□□□ -1.2
HMGB1P10-201ENST00000395823 SMNDC1O75940 238 aaKnown RBP eCLIP7.56□□□□□ -1.2
HMGB1P10-201ENST00000395823 BMP4P12644 408 aa7.56□□□□□ -1.2
HMGB1P10-201ENST00000395823 CANXP27824 592 aaKnown RBP7.56□□□□□ -1.2
HMGB1P10-201ENST00000395823 COL9A2Q14055 689 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P10-201ENST00000395823 PCSK7Q16549 785 aa7.56□□□□□ -1.2
HMGB1P10-201ENST00000395823 CKAP2LQ8IYA6 745 aa7.56□□□□□ -1.2
HMGB1P10-201ENST00000395823 NLGN1Q8N2Q7 840 aa7.56□□□□□ -1.2
HMGB1P10-201ENST00000395823 GAL3ST3Q96A11 431 aa7.56□□□□□ -1.2
HMGB1P10-201ENST00000395823 LPIN3Q9BQK8 851 aa7.56□□□□□ -1.2
HMGB1P10-201ENST00000395823 ADAM19Q9H013 955 aa7.56□□□□□ -1.2
HMGB1P10-201ENST00000395823 STRIP2Q9ULQ0 834 aa7.56□□□□□ -1.2
HMGB1P10-201ENST00000395823 TLDC2A0PJX2 215 aa7.55□□□□□ -1.2
HMGB1P10-201ENST00000395823 LCE2BO14633 110 aa7.55□□□□□ -1.2
HMGB1P10-201ENST00000395823 ADH7P40394 386 aa7.55□□□□□ -1.2
HMGB1P10-201ENST00000395823 SEPT6Q14141 434 aa7.55□□□□□ -1.2
HMGB1P10-201ENST00000395823 SEZ6Q53EL9 994 aa7.55□□□□□ -1.2
HMGB1P10-201ENST00000395823 NBPF6Q5VWK0 638 aa7.55□□□□□ -1.2
HMGB1P10-201ENST00000395823 ZNF746Q6NUN9 644 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P10-201ENST00000395823 CCDC81Q6ZN84 652 aa7.55□□□□□ -1.2
HMGB1P10-201ENST00000395823 CCDC84Q86UT8 332 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P10-201ENST00000395823 JAZF1Q86VZ6 243 aa7.55□□□□□ -1.2
HMGB1P10-201ENST00000395823 FCHSD1Q86WN1 690 aa7.55□□□□□ -1.2
HMGB1P10-201ENST00000395823 GRIN3AQ8TCU5 1115 aa7.55□□□□□ -1.2
HMGB1P10-201ENST00000395823 NKD1Q969G9 470 aa7.55□□□□□ -1.2
HMGB1P10-201ENST00000395823 SHDQ96IW2 340 aa7.55□□□□□ -1.2
HMGB1P10-201ENST00000395823 NBPF4Q96M43 638 aa7.55□□□□□ -1.2
HMGB1P10-201ENST00000395823 SMG9Q9H0W8 520 aaKnown RBP7.55□□□□□ -1.2
HMGB1P10-201ENST00000395823 AVENQ9NQS1 362 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P10-201ENST00000395823 PPT2Q9UMR5 302 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms