RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 TMX4Q9H1E5 349 aaPredicted RBP18.66■□□□□ 0.58
SMARCD1-202ENST00000394963 DENND2AQ9ULE3 1009 aa18.66■□□□□ 0.58
SMARCD1-202ENST00000394963 TOPAZ1Q8N9V7 1692 aa18.66■□□□□ 0.58
SMARCD1-202ENST00000394963 BECN2A8MW95 431 aa18.65■□□□□ 0.58
SMARCD1-202ENST00000394963 MCM5P33992 734 aa18.65■□□□□ 0.58
SMARCD1-202ENST00000394963 PIH1D3Q9NQM4 214 aaKnown RBP18.65■□□□□ 0.58
SMARCD1-202ENST00000394963 MED1Q15648 1581 aaPredicted RBP18.65■□□□□ 0.58
SMARCD1-202ENST00000394963 FAM196AQ6ZSG2 479 aa18.65■□□□□ 0.58
SMARCD1-202ENST00000394963 DZIP1Q86YF9 867 aaKnown RBP18.65■□□□□ 0.58
SMARCD1-202ENST00000394963 APPBP2Q92624 585 aa18.65■□□□□ 0.58
SMARCD1-202ENST00000394963 A0A087WWV3 80 aa18.65■□□□□ 0.58
SMARCD1-202ENST00000394963 SASS6Q6UVJ0 657 aa18.65■□□□□ 0.58
SMARCD1-202ENST00000394963 TPTE2Q6XPS3 522 aa18.65■□□□□ 0.58
SMARCD1-202ENST00000394963 BIN1O00499 593 aa18.64■□□□□ 0.58
SMARCD1-202ENST00000394963 HSPA1LP34931 641 aa18.64■□□□□ 0.58
SMARCD1-202ENST00000394963 MSL1Q68DK7 614 aa18.64■□□□□ 0.57
SMARCD1-202ENST00000394963 RASSF8Q8NHQ8 419 aa18.64■□□□□ 0.57
SMARCD1-202ENST00000394963 LPIN2Q92539 896 aa18.64■□□□□ 0.57
SMARCD1-202ENST00000394963 RPGRQ92834 1020 aaKnown RBP18.64■□□□□ 0.57
SMARCD1-202ENST00000394963 DACT1Q9NYF0 836 aa18.64■□□□□ 0.57
SMARCD1-202ENST00000394963 UBN2Q6ZU65 1347 aa18.64■□□□□ 0.57
SMARCD1-202ENST00000394963 NOL10Q9BSC4 688 aaKnown RBP18.64■□□□□ 0.57
SMARCD1-202ENST00000394963 SLC26A6Q9BXS9 759 aa18.64■□□□□ 0.57
SMARCD1-202ENST00000394963 CYP2E1P05181 493 aaPredicted RBP18.63■□□□□ 0.57
SMARCD1-202ENST00000394963 PDE6AP16499 860 aa18.63■□□□□ 0.57
SMARCD1-202ENST00000394963 MARCKSP29966 332 aaPredicted RBP18.63■□□□□ 0.57
SMARCD1-202ENST00000394963 SART3Q15020 963 aaKnown RBP18.63■□□□□ 0.57
SMARCD1-202ENST00000394963 ADD1P35611 737 aaKnown RBP18.63■□□□□ 0.57
SMARCD1-202ENST00000394963 TRAPPC3LQ5T215 181 aa18.63■□□□□ 0.57
SMARCD1-202ENST00000394963 MFSD6Q6ZSS7 791 aa18.63■□□□□ 0.57
SMARCD1-202ENST00000394963 STOX1Q6ZVD7 989 aa18.63■□□□□ 0.57
SMARCD1-202ENST00000394963 SLC12A7Q9Y666 1083 aa18.63■□□□□ 0.57
SMARCD1-202ENST00000394963 CYP2D7A0A087X1C5 515 aa18.63■□□□□ 0.57
SMARCD1-202ENST00000394963 LRP10Q7Z4F1 713 aa18.63■□□□□ 0.57
SMARCD1-202ENST00000394963 NUP62CLQ9H1M0 184 aa18.63■□□□□ 0.57
SMARCD1-202ENST00000394963 HELLSQ9NRZ9 838 aa18.63■□□□□ 0.57
SMARCD1-202ENST00000394963 GOLGA8AA7E2F4 631 aa18.62■□□□□ 0.57
SMARCD1-202ENST00000394963 METAP2P50579 478 aaKnown RBP eCLIP18.62■□□□□ 0.57
SMARCD1-202ENST00000394963 RASGRF1Q13972 1273 aa18.62■□□□□ 0.57
SMARCD1-202ENST00000394963 TTF1Q15361 905 aaPredicted RBP18.62■□□□□ 0.57
SMARCD1-202ENST00000394963 AATFQ9NY61 560 aaKnown RBP eCLIP18.62■□□□□ 0.57
SMARCD1-202ENST00000394963 MTMR6Q9Y217 621 aa18.62■□□□□ 0.57
SMARCD1-202ENST00000394963 UQCRFS1P1P0C7P4 283 aa18.62■□□□□ 0.57
SMARCD1-202ENST00000394963 SCRN1Q12765 414 aa18.62■□□□□ 0.57
SMARCD1-202ENST00000394963 NKX1-1Q15270 411 aaPredicted RBP18.62■□□□□ 0.57
SMARCD1-202ENST00000394963 CELF1Q92879 486 aaKnown RBP18.62■□□□□ 0.57
SMARCD1-202ENST00000394963 SPATA31A1Q5TZJ5 1347 aa18.62■□□□□ 0.57
SMARCD1-202ENST00000394963 CASP7P55210 303 aa18.62■□□□□ 0.57
SMARCD1-202ENST00000394963 TBC1D9BQ66K14 1250 aa18.62■□□□□ 0.57
SMARCD1-202ENST00000394963 USP5P45974 858 aa18.61■□□□□ 0.57
SMARCD1-202ENST00000394963 ZMYM1Q5SVZ6 1142 aa18.61■□□□□ 0.57
SMARCD1-202ENST00000394963 NAA16Q6N069 864 aaPredicted RBP18.61■□□□□ 0.57
SMARCD1-202ENST00000394963 ZFYP08048 801 aaPredicted RBP18.61■□□□□ 0.57
SMARCD1-202ENST00000394963 HMGB1P09429 215 aaKnown RBP18.61■□□□□ 0.57
SMARCD1-202ENST00000394963 CUL4AQ13619 759 aa18.61■□□□□ 0.57
SMARCD1-202ENST00000394963 RGPD5Q99666 1765 aa18.61■□□□□ 0.57
SMARCD1-202ENST00000394963 GOLGA6L19H0YKK7 550 aa18.61■□□□□ 0.57
SMARCD1-202ENST00000394963 KINO60870 393 aaKnown RBP18.61■□□□□ 0.57
SMARCD1-202ENST00000394963 CDCA7Q9BWT1 371 aaPredicted RBP18.61■□□□□ 0.57
SMARCD1-202ENST00000394963 TOB2Q14106 344 aaPredicted RBP18.6■□□□□ 0.57
SMARCD1-202ENST00000394963 TTC14Q96N46 770 aa18.6■□□□□ 0.57
SMARCD1-202ENST00000394963 AIFM3Q96NN9 605 aa18.6■□□□□ 0.57
SMARCD1-202ENST00000394963 UTYO14607 1347 aa18.6■□□□□ 0.57
SMARCD1-202ENST00000394963 RBM5P52756 815 aaKnown RBP eCLIP18.6■□□□□ 0.57
SMARCD1-202ENST00000394963 VSIG10Q8N0Z9 540 aa18.6■□□□□ 0.57
SMARCD1-202ENST00000394963 QTRT2Q9H974 415 aaKnown RBP18.6■□□□□ 0.57
SMARCD1-202ENST00000394963 ZNF609O15014 1411 aa18.59■□□□□ 0.57
SMARCD1-202ENST00000394963 ZNF622Q969S3 477 aaKnown RBP eCLIP18.59■□□□□ 0.57
SMARCD1-202ENST00000394963 UBE2HP62256 183 aa18.59■□□□□ 0.57
SMARCD1-202ENST00000394963 PDILTQ8N807 584 aa18.59■□□□□ 0.57
SMARCD1-202ENST00000394963 TRIM5Q9C035 493 aa18.59■□□□□ 0.57
SMARCD1-202ENST00000394963 NCOA3Q9Y6Q9 1424 aa18.59■□□□□ 0.57
SMARCD1-202ENST00000394963 ESPNB1AK53 854 aa18.59■□□□□ 0.57
SMARCD1-202ENST00000394963 RPS8P62241 208 aaKnown RBP18.59■□□□□ 0.57
SMARCD1-202ENST00000394963 DYNLL1P63167 89 aaKnown RBP18.59■□□□□ 0.57
SMARCD1-202ENST00000394963 PARP10Q53GL7 1025 aa18.59■□□□□ 0.57
SMARCD1-202ENST00000394963 HSP90AA4PQ58FG1 418 aa18.59■□□□□ 0.57
SMARCD1-202ENST00000394963 LINC00116Q8NCU8 138 aa18.59■□□□□ 0.57
SMARCD1-202ENST00000394963 EIF5P55010 431 aaKnown RBP18.58■□□□□ 0.57
SMARCD1-202ENST00000394963 KIAA2012Q0VF49 1180 aa18.58■□□□□ 0.57
SMARCD1-202ENST00000394963 RIPOR2Q9Y4F9 1068 aa18.58■□□□□ 0.57
SMARCD1-202ENST00000394963 SAFBQ15424 915 aaKnown RBP eCLIP18.58■□□□□ 0.56
SMARCD1-202ENST00000394963 CNBD1Q8NA66 436 aa18.58■□□□□ 0.56
SMARCD1-202ENST00000394963 DCCP43146 1447 aa18.58■□□□□ 0.56
SMARCD1-202ENST00000394963 SEPT12Q8IYM1 358 aa18.58■□□□□ 0.56
SMARCD1-202ENST00000394963 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.57■□□□□ 0.56
SMARCD1-202ENST00000394963 ZBTB43O43298 467 aa18.57■□□□□ 0.56
SMARCD1-202ENST00000394963 IARSP41252 1262 aaKnown RBP18.57■□□□□ 0.56
SMARCD1-202ENST00000394963 CCDC183Q5T5S1 534 aa18.57■□□□□ 0.56
SMARCD1-202ENST00000394963 INTS5Q6P9B9 1019 aaKnown RBP18.57■□□□□ 0.56
SMARCD1-202ENST00000394963 SAP30BPQ9UHR5 308 aaKnown RBP18.57■□□□□ 0.56
SMARCD1-202ENST00000394963 STX8Q9UNK0 236 aa18.57■□□□□ 0.56
SMARCD1-202ENST00000394963 MAGEB6P1A0A0J9YX57 407 aa18.57■□□□□ 0.56
SMARCD1-202ENST00000394963 LIG1P18858 919 aa18.57■□□□□ 0.56
SMARCD1-202ENST00000394963 TTC6Q86TZ1 520 aa18.57■□□□□ 0.56
SMARCD1-202ENST00000394963 ALG1Q9BT22 464 aa18.57■□□□□ 0.56
SMARCD1-202ENST00000394963 TM6SF1Q9BZW5 370 aa18.57■□□□□ 0.56
SMARCD1-202ENST00000394963 SPECC1Q5M775 1068 aa18.56■□□□□ 0.56
SMARCD1-202ENST00000394963 VAT1LQ9HCJ6 419 aa18.56■□□□□ 0.56
SMARCD1-202ENST00000394963 LRSAM1Q6UWE0 723 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms