RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 SDCCAG8Q86SQ7 713 aaPredicted RBP13.8□□□□□ -0.2
SIN3A-202ENST00000394947 ANKRD50Q9ULJ7 1429 aa13.8□□□□□ -0.2
SIN3A-202ENST00000394947 ZFYP08048 801 aaPredicted RBP13.8□□□□□ -0.2
SIN3A-202ENST00000394947 ATP11AP98196 1134 aa13.8□□□□□ -0.2
SIN3A-202ENST00000394947 BIRC3Q13489 604 aa13.8□□□□□ -0.2
SIN3A-202ENST00000394947 NEDD9Q14511 834 aa13.8□□□□□ -0.2
SIN3A-202ENST00000394947 PPP1R42Q7Z4L9 355 aa13.8□□□□□ -0.2
SIN3A-202ENST00000394947 C16orf71Q8IYS4 520 aaPredicted RBP13.8□□□□□ -0.2
SIN3A-202ENST00000394947 IFNKQ9P0W0 207 aa13.8□□□□□ -0.2
SIN3A-202ENST00000394947 RTL1A6NKG5 1358 aa13.8□□□□□ -0.2
SIN3A-202ENST00000394947 IVLP07476 585 aa13.8□□□□□ -0.2
SIN3A-202ENST00000394947 MCM5P33992 734 aa13.8□□□□□ -0.2
SIN3A-202ENST00000394947 NCBP1Q09161 790 aaKnown RBP13.8□□□□□ -0.2
SIN3A-202ENST00000394947 PTPROQ16827 1216 aa13.8□□□□□ -0.2
SIN3A-202ENST00000394947 HELBQ8NG08 1087 aaPredicted RBP13.8□□□□□ -0.2
SIN3A-202ENST00000394947 CCDC42Q96M95 316 aa13.8□□□□□ -0.2
SIN3A-202ENST00000394947 STK38LQ9Y2H1 464 aa13.8□□□□□ -0.2
SIN3A-202ENST00000394947 RFX1P22670 979 aa13.8□□□□□ -0.2
SIN3A-202ENST00000394947 PRKG1Q13976 671 aa13.8□□□□□ -0.2
SIN3A-202ENST00000394947 CASC4Q6P4E1 433 aa13.8□□□□□ -0.2
SIN3A-202ENST00000394947 STMN4Q9H169 189 aaPredicted RBP13.8□□□□□ -0.2
SIN3A-202ENST00000394947 EBAG9O00559 213 aa13.8□□□□□ -0.2
SIN3A-202ENST00000394947 FOXO3O43524 673 aa13.8□□□□□ -0.2
SIN3A-202ENST00000394947 ZSCAN22P10073 491 aaPredicted RBP13.8□□□□□ -0.2
SIN3A-202ENST00000394947 INF2Q27J81 1249 aa13.8□□□□□ -0.2
SIN3A-202ENST00000394947 GTPBP4Q9BZE4 634 aaKnown RBP13.8□□□□□ -0.2
SIN3A-202ENST00000394947 ANKFY1Q9P2R3 1169 aa13.8□□□□□ -0.2
SIN3A-202ENST00000394947 NBPF8Q3BBV2 869 aa13.79□□□□□ -0.2
SIN3A-202ENST00000394947 NBPF11Q86T75 865 aa13.79□□□□□ -0.2
SIN3A-202ENST00000394947 RSRC1Q96IZ7 334 aaKnown RBP13.79□□□□□ -0.2
SIN3A-202ENST00000394947 TBC1D7Q9P0N9 293 aa13.79□□□□□ -0.2
SIN3A-202ENST00000394947 TMX3Q96JJ7 454 aa13.79□□□□□ -0.2
SIN3A-202ENST00000394947 TACO1Q9BSH4 297 aaKnown RBP13.79□□□□□ -0.2
SIN3A-202ENST00000394947 ATP2A2P16615 1042 aaKnown RBP13.79□□□□□ -0.2
SIN3A-202ENST00000394947 APOBRQ0VD83 1088 aa13.79□□□□□ -0.2
SIN3A-202ENST00000394947 CCDC117Q8IWD4 279 aaPredicted RBP13.79□□□□□ -0.2
SIN3A-202ENST00000394947 DDX12PQ92771 950 aa13.79□□□□□ -0.2
SIN3A-202ENST00000394947 TTC14Q96N46 770 aa13.79□□□□□ -0.2
SIN3A-202ENST00000394947 LACTBP83111 547 aaPredicted RBP13.79□□□□□ -0.2
SIN3A-202ENST00000394947 SPDYE3A6NKU9 549 aa13.79□□□□□ -0.2
SIN3A-202ENST00000394947 CCDC169A6NNP5 214 aa13.79□□□□□ -0.2
SIN3A-202ENST00000394947 ANKLE2Q86XL3 938 aa13.79□□□□□ -0.2
SIN3A-202ENST00000394947 THEMISQ8N1K5 641 aaPredicted RBP13.79□□□□□ -0.2
SIN3A-202ENST00000394947 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.79□□□□□ -0.2
SIN3A-202ENST00000394947 MORC4Q8TE76 937 aa13.79□□□□□ -0.2
SIN3A-202ENST00000394947 CASQ2O14958 399 aaPredicted RBP13.78□□□□□ -0.2
SIN3A-202ENST00000394947 CCDC14Q49A88 953 aa13.78□□□□□ -0.2
SIN3A-202ENST00000394947 SEL1L2Q5TEA6 688 aa13.78□□□□□ -0.2
SIN3A-202ENST00000394947 CDC5LQ99459 802 aaKnown RBP13.78□□□□□ -0.2
SIN3A-202ENST00000394947 NUF2Q9BZD4 464 aa13.78□□□□□ -0.2
SIN3A-202ENST00000394947 FAM204AQ9H8W3 233 aa13.78□□□□□ -0.2
SIN3A-202ENST00000394947 BZW2Q9Y6E2 419 aaKnown RBP13.78□□□□□ -0.2
SIN3A-202ENST00000394947 MYOM3Q5VTT5 1437 aa13.78□□□□□ -0.2
SIN3A-202ENST00000394947 PSMA7O14818 248 aa13.78□□□□□ -0.2
SIN3A-202ENST00000394947 RARSP54136 660 aaKnown RBP13.78□□□□□ -0.2
SIN3A-202ENST00000394947 KIF22Q14807 665 aa13.78□□□□□ -0.2
SIN3A-202ENST00000394947 RAB3GAP1Q15042 981 aa13.78□□□□□ -0.2
SIN3A-202ENST00000394947 CTAGE1Q96RT6 745 aa13.78□□□□□ -0.2
SIN3A-202ENST00000394947 IL1RL1Q01638 556 aa13.78□□□□□ -0.2
SIN3A-202ENST00000394947 ITIH3Q06033 890 aa13.78□□□□□ -0.2
SIN3A-202ENST00000394947 RAD51AP2Q09MP3 1159 aa13.78□□□□□ -0.2
SIN3A-202ENST00000394947 PLEKHH1Q9ULM0 1364 aa13.78□□□□□ -0.2
SIN3A-202ENST00000394947 PI4KAP2A4QPH2 592 aa13.78□□□□□ -0.2
SIN3A-202ENST00000394947 C4orf50Q6ZRC1 276 aa13.78□□□□□ -0.2
SIN3A-202ENST00000394947 TAB3Q8N5C8 712 aaPredicted RBP13.78□□□□□ -0.2
SIN3A-202ENST00000394947 PI4KAP1Q8N8J0 262 aa13.78□□□□□ -0.2
SIN3A-202ENST00000394947 FAM76AQ8TAV0 307 aa13.78□□□□□ -0.2
SIN3A-202ENST00000394947 LRRC27Q9C0I9 530 aa13.78□□□□□ -0.2
SIN3A-202ENST00000394947 C6orf50Q9HD87 102 aa13.78□□□□□ -0.2
SIN3A-202ENST00000394947 GJA3Q9Y6H8 435 aa13.78□□□□□ -0.2
SIN3A-202ENST00000394947 ZNF174Q15697 407 aa13.77□□□□□ -0.2
SIN3A-202ENST00000394947 GPCPD1Q9NPB8 672 aa13.77□□□□□ -0.2
SIN3A-202ENST00000394947 SPOPO43791 374 aa13.77□□□□□ -0.2
SIN3A-202ENST00000394947 MAGEB6Q8N7X4 407 aa13.77□□□□□ -0.2
SIN3A-202ENST00000394947 NACA2Q9H009 215 aa13.77□□□□□ -0.2
SIN3A-202ENST00000394947 MROH2BQ7Z745 1585 aa13.77□□□□□ -0.2
SIN3A-202ENST00000394947 SCAPERQ9BY12 1400 aa13.77□□□□□ -0.2
SIN3A-202ENST00000394947 ECHDC1Q9NTX5 307 aa13.77□□□□□ -0.21
SIN3A-202ENST00000394947 CLNS1AP54105 237 aaKnown RBP13.77□□□□□ -0.21
SIN3A-202ENST00000394947 DCLK2Q8N568 766 aa13.77□□□□□ -0.21
SIN3A-202ENST00000394947 PA2G4Q9UQ80 394 aaKnown RBP13.77□□□□□ -0.21
SIN3A-202ENST00000394947 EXOC5O00471 708 aa13.77□□□□□ -0.21
SIN3A-202ENST00000394947 IGHDP01880 384 aa13.77□□□□□ -0.21
SIN3A-202ENST00000394947 PPFIBP2Q8ND30 876 aa13.77□□□□□ -0.21
SIN3A-202ENST00000394947 VPS16Q9H269 839 aa13.77□□□□□ -0.21
SIN3A-202ENST00000394947 RABGAP1Q9Y3P9 1069 aa13.77□□□□□ -0.21
SIN3A-202ENST00000394947 FRMD3A2A2Y4 597 aa13.76□□□□□ -0.21
SIN3A-202ENST00000394947 NBPF7P0C2Y1 421 aaPredicted RBP13.76□□□□□ -0.21
SIN3A-202ENST00000394947 BEND3Q5T5X7 828 aa13.76□□□□□ -0.21
SIN3A-202ENST00000394947 TBC1D31Q96DN5 1066 aa13.76□□□□□ -0.21
SIN3A-202ENST00000394947 KRT2P35908 639 aa13.76□□□□□ -0.21
SIN3A-202ENST00000394947 TRIM68Q6AZZ1 485 aa13.76□□□□□ -0.21
SIN3A-202ENST00000394947 BAG1Q99933 345 aaPredicted RBP13.76□□□□□ -0.21
SIN3A-202ENST00000394947 DDX21Q9NR30 783 aaKnown RBP eCLIP13.76□□□□□ -0.21
SIN3A-202ENST00000394947 SLC39A6Q13433 755 aa13.76□□□□□ -0.21
SIN3A-202ENST00000394947 PRR16Q569H4 304 aa13.76□□□□□ -0.21
SIN3A-202ENST00000394947 SPOUT1Q5T280 376 aaKnown RBP13.76□□□□□ -0.21
SIN3A-202ENST00000394947 CPSF2Q9P2I0 782 aaKnown RBP13.76□□□□□ -0.21
SIN3A-202ENST00000394947 KRT86O43790 486 aa13.76□□□□□ -0.21
SIN3A-202ENST00000394947 IFRD2Q12894 506 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms