RNA–Protein interactions for RNA: ENST00000394684.8

SGMS2-202, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 6,149 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-202ENST00000394684 VPS52Q8N1B4 723 aa9.89□□□□□ -0.83
SGMS2-202ENST00000394684 NECAB1Q8N987 351 aa9.89□□□□□ -0.83
SGMS2-202ENST00000394684 LEO1Q8WVC0 666 aaPredicted RBP9.89□□□□□ -0.83
SGMS2-202ENST00000394684 SH2D4AQ9H788 454 aa9.89□□□□□ -0.83
SGMS2-202ENST00000394684 CCDC169A6NNP5 214 aa9.89□□□□□ -0.83
SGMS2-202ENST00000394684 CALML3P27482 149 aa9.89□□□□□ -0.83
SGMS2-202ENST00000394684 HSPA1LP34931 641 aa9.89□□□□□ -0.83
SGMS2-202ENST00000394684 CCDC42Q96M95 316 aa9.89□□□□□ -0.83
SGMS2-202ENST00000394684 SEC62Q99442 399 aaKnown RBP9.89□□□□□ -0.83
SGMS2-202ENST00000394684 MCM7P33993 719 aa9.89□□□□□ -0.83
SGMS2-202ENST00000394684 KCNG4Q8TDN1 519 aa9.89□□□□□ -0.83
SGMS2-202ENST00000394684 JAKMIP2Q96AA8 810 aa9.89□□□□□ -0.83
SGMS2-202ENST00000394684 PLIN2Q99541 437 aa9.89□□□□□ -0.83
SGMS2-202ENST00000394684 PIK3R4Q99570 1358 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 OPA1O60313 960 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 TRPC3Q13507 836 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 MIGA1Q8NAN2 632 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 FRMD4BQ9Y2L6 1034 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 TRIM75PA6NK02 468 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 WASLO00401 505 aaPredicted RBP9.88□□□□□ -0.83
SGMS2-202ENST00000394684 LDHBP07195 334 aaKnown RBP9.88□□□□□ -0.83
SGMS2-202ENST00000394684 CAPZA3Q96KX2 299 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 CLSTN2Q9H4D0 955 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 MTRF1LQ9UGC7 380 aaKnown RBP9.88□□□□□ -0.83
SGMS2-202ENST00000394684 PRXQ9BXM0 1461 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 PRKG1Q13976 671 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 DZIP3Q86Y13 1208 aaKnown RBP9.88□□□□□ -0.83
SGMS2-202ENST00000394684 XAGE3Q8WTP9 111 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 MTUS1Q9ULD2 1270 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 MSH6P52701 1360 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 ABCA10Q8WWZ4 1543 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 BICDL2A1A5D9 508 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 KRT83P78385 493 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 PKNOX2Q96KN3 472 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 CHMP2AO43633 222 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 GNA11P29992 359 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 KRT2P35908 639 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 CALCOCO2Q13137 446 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 SEPT6Q14141 434 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 MCM6Q14566 821 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 CLUL1Q15846 466 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 NSMCE1Q8WV22 266 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 IFT81Q8WYA0 676 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 STIM2Q9P246 746 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 KIAA1107Q9UPP5 1409 aa9.88□□□□□ -0.83
SGMS2-202ENST00000394684 M0QZ92 97 aa9.87□□□□□ -0.83
SGMS2-202ENST00000394684 RARSP54136 660 aaKnown RBP9.87□□□□□ -0.83
SGMS2-202ENST00000394684 UBE2HP62256 183 aa9.87□□□□□ -0.83
SGMS2-202ENST00000394684 UBXN1Q04323 297 aa9.87□□□□□ -0.83
SGMS2-202ENST00000394684 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.87□□□□□ -0.83
SGMS2-202ENST00000394684 SEL1L2Q5TEA6 688 aa9.87□□□□□ -0.83
SGMS2-202ENST00000394684 COPS6Q7L5N1 327 aa9.87□□□□□ -0.83
SGMS2-202ENST00000394684 CCDC125Q86Z20 511 aa9.87□□□□□ -0.83
SGMS2-202ENST00000394684 GABPB2Q8TAK5 448 aaPredicted RBP9.87□□□□□ -0.83
SGMS2-202ENST00000394684 PPANQ9NQ55 473 aaKnown RBP9.87□□□□□ -0.83
SGMS2-202ENST00000394684 RTL9Q8NET4 1388 aa9.87□□□□□ -0.83
SGMS2-202ENST00000394684 ABCC11Q96J66 1382 aa9.87□□□□□ -0.83
SGMS2-202ENST00000394684 KRT86O43790 486 aa9.87□□□□□ -0.83
SGMS2-202ENST00000394684 ERCC5P28715 1186 aaPredicted RBP9.87□□□□□ -0.83
SGMS2-202ENST00000394684 GIMAP6Q6P9H5 292 aa9.87□□□□□ -0.83
SGMS2-202ENST00000394684 KIFAP3Q92845 792 aa9.87□□□□□ -0.83
SGMS2-202ENST00000394684 TCEANC2Q96MN5 208 aa9.87□□□□□ -0.83
SGMS2-202ENST00000394684 RBM27Q9P2N5 1060 aaKnown RBP9.87□□□□□ -0.83
SGMS2-202ENST00000394684 STK10O94804 968 aaKnown RBP9.87□□□□□ -0.83
SGMS2-202ENST00000394684 SMTNP53814 917 aa9.87□□□□□ -0.83
SGMS2-202ENST00000394684 STRN3Q13033 797 aa9.87□□□□□ -0.83
SGMS2-202ENST00000394684 LMBR1LQ6UX01 489 aa9.87□□□□□ -0.83
SGMS2-202ENST00000394684 FCHSD1Q86WN1 690 aa9.87□□□□□ -0.83
SGMS2-202ENST00000394684 TNPO1Q92973 898 aaKnown RBP9.87□□□□□ -0.83
SGMS2-202ENST00000394684 MRRFQ96E11 262 aaKnown RBP9.87□□□□□ -0.83
SGMS2-202ENST00000394684 DNAI1Q9UI46 699 aa9.87□□□□□ -0.83
SGMS2-202ENST00000394684 TTC21BQ7Z4L5 1316 aa9.87□□□□□ -0.83
SGMS2-202ENST00000394684 RPL13P26373 211 aaKnown RBP9.86□□□□□ -0.83
SGMS2-202ENST00000394684 RSPH3Q86UC2 560 aa9.86□□□□□ -0.83
SGMS2-202ENST00000394684 MAGEB6Q8N7X4 407 aa9.86□□□□□ -0.83
SGMS2-202ENST00000394684 HELBQ8NG08 1087 aaPredicted RBP9.86□□□□□ -0.83
SGMS2-202ENST00000394684 IFT74Q96LB3 600 aa9.86□□□□□ -0.83
SGMS2-202ENST00000394684 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.86□□□□□ -0.83
SGMS2-202ENST00000394684 CTAGE9A4FU28 777 aa9.86□□□□□ -0.83
SGMS2-202ENST00000394684 RRP9O43818 475 aaKnown RBP9.86□□□□□ -0.83
SGMS2-202ENST00000394684 SLC39A6Q13433 755 aa9.86□□□□□ -0.83
SGMS2-202ENST00000394684 PSMD6Q15008 389 aa9.86□□□□□ -0.83
SGMS2-202ENST00000394684 SETDB1Q15047 1291 aa9.86□□□□□ -0.83
SGMS2-202ENST00000394684 ZYXQ15942 572 aaKnown RBP9.86□□□□□ -0.83
SGMS2-202ENST00000394684 MCMDC2Q4G0Z9 681 aa9.86□□□□□ -0.83
SGMS2-202ENST00000394684 RBM17Q96I25 401 aaKnown RBP9.86□□□□□ -0.83
SGMS2-202ENST00000394684 STK32BQ9NY57 414 aa9.86□□□□□ -0.83
SGMS2-202ENST00000394684 FAM184BQ9ULE4 1060 aa9.86□□□□□ -0.83
SGMS2-202ENST00000394684 CAMSAP2Q08AD1 1489 aa9.86□□□□□ -0.83
SGMS2-202ENST00000394684 CCT6AP40227 531 aaKnown RBP9.86□□□□□ -0.83
SGMS2-202ENST00000394684 DTHD1Q6ZMT9 781 aa9.86□□□□□ -0.83
SGMS2-202ENST00000394684 Q6ZUG5 572 aa9.86□□□□□ -0.83
SGMS2-202ENST00000394684 CPLX4Q7Z7G2 160 aa9.86□□□□□ -0.83
SGMS2-202ENST00000394684 MRPS27Q92552 414 aaKnown RBP9.86□□□□□ -0.83
SGMS2-202ENST00000394684 RSPH14Q9UHP6 348 aa9.86□□□□□ -0.83
SGMS2-202ENST00000394684 SAP30BPQ9UHR5 308 aaKnown RBP9.86□□□□□ -0.83
SGMS2-202ENST00000394684 TTLL3Q9Y4R7 772 aa9.86□□□□□ -0.83
SGMS2-202ENST00000394684 CAVIN2O95810 425 aa9.86□□□□□ -0.83
SGMS2-202ENST00000394684 MYCLP12524 364 aaPredicted RBP9.86□□□□□ -0.83
SGMS2-202ENST00000394684 STX17P56962 302 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms