RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 PPP1R21Q6ZMI0 780 aa15.03■□□□□ -0
USP49-203ENST00000394253 E9PMD0 336 aa15.03■□□□□ -0
USP49-203ENST00000394253 TRAF1Q13077 416 aa15.03■□□□□ -0
USP49-203ENST00000394253 C8orf74Q6P047 294 aa15.02■□□□□ -0
USP49-203ENST00000394253 TCP11L2Q8N4U5 519 aa15.02■□□□□ -0
USP49-203ENST00000394253 RILPQ96NA2 401 aa15.02■□□□□ -0
USP49-203ENST00000394253 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.02■□□□□ -0
USP49-203ENST00000394253 LMNAP02545 664 aaKnown RBP15.02■□□□□ -0
USP49-203ENST00000394253 TMEM110-MUSTN1A8MSY1 372 aa15.02■□□□□ -0
USP49-203ENST00000394253 ERO1AQ96HE7 468 aa15.02■□□□□ -0
USP49-203ENST00000394253 PDE4BQ07343 736 aa15.02□□□□□ -0.01
USP49-203ENST00000394253 RPS6KA2Q15349 733 aa15.02□□□□□ -0.01
USP49-203ENST00000394253 UBXN1Q04323 297 aa15.02□□□□□ -0.01
USP49-203ENST00000394253 ABCF2Q9UG63 623 aa15.01□□□□□ -0.01
USP49-203ENST00000394253 NKTRP30414 1462 aaKnown RBP15.01□□□□□ -0.01
USP49-203ENST00000394253 CCDC92Q53HC0 331 aaPredicted RBP15.01□□□□□ -0.01
USP49-203ENST00000394253 MCM10Q7L590 875 aa15.01□□□□□ -0.01
USP49-203ENST00000394253 DEUP1Q05D60 604 aa15.01□□□□□ -0.01
USP49-203ENST00000394253 NACADO15069 1562 aa15.01□□□□□ -0.01
USP49-203ENST00000394253 SPDL1Q96EA4 605 aa15.01□□□□□ -0.01
USP49-203ENST00000394253 ZNF652Q9Y2D9 606 aa15.01□□□□□ -0.01
USP49-203ENST00000394253 SUPT6HQ7KZ85 1726 aaKnown RBP15.01□□□□□ -0.01
USP49-203ENST00000394253 CDR2Q01850 454 aa15.01□□□□□ -0.01
USP49-203ENST00000394253 ARHGEF9O43307 516 aa15.01□□□□□ -0.01
USP49-203ENST00000394253 ZFXP17010 805 aaPredicted RBP15.01□□□□□ -0.01
USP49-203ENST00000394253 CCDC122Q5T0U0 273 aa15.01□□□□□ -0.01
USP49-203ENST00000394253 CENPKQ9BS16 269 aa15.01□□□□□ -0.01
USP49-203ENST00000394253 RASA3Q14644 834 aa15.01□□□□□ -0.01
USP49-203ENST00000394253 CCDC93Q567U6 631 aa15.01□□□□□ -0.01
USP49-203ENST00000394253 HHATQ5VTY9 493 aa15.01□□□□□ -0.01
USP49-203ENST00000394253 PRPF40BQ6NWY9 871 aaKnown RBP15.01□□□□□ -0.01
USP49-203ENST00000394253 GJB2P29033 226 aa15□□□□□ -0.01
USP49-203ENST00000394253 MMRN2Q9H8L6 949 aa15□□□□□ -0.01
USP49-203ENST00000394253 RANBP6O60518 1105 aaKnown RBP15□□□□□ -0.01
USP49-203ENST00000394253 RPAP2Q8IXW5 612 aaPredicted RBP15□□□□□ -0.01
USP49-203ENST00000394253 BAIAP2L1Q9UHR4 511 aa15□□□□□ -0.01
USP49-203ENST00000394253 AFG3L2Q9Y4W6 797 aa15□□□□□ -0.01
USP49-203ENST00000394253 NUB1Q9Y5A7 615 aa15□□□□□ -0.01
USP49-203ENST00000394253 COPG1Q9Y678 874 aaKnown RBP15□□□□□ -0.01
USP49-203ENST00000394253 IFIT3O14879 490 aaKnown RBP15□□□□□ -0.01
USP49-203ENST00000394253 TRIM14Q14142 442 aa15□□□□□ -0.01
USP49-203ENST00000394253 FAM204AQ9H8W3 233 aa15□□□□□ -0.01
USP49-203ENST00000394253 WDR70Q9NW82 654 aa15□□□□□ -0.01
USP49-203ENST00000394253 TROVE2P10155 538 aaKnown RBP eCLIP15□□□□□ -0.01
USP49-203ENST00000394253 SNCBQ16143 134 aa15□□□□□ -0.01
USP49-203ENST00000394253 FAM177BA6PVY3 158 aa15□□□□□ -0.01
USP49-203ENST00000394253 VWA3BQ502W6 1294 aa15□□□□□ -0.01
USP49-203ENST00000394253 EFCC1Q9HA90 598 aa15□□□□□ -0.01
USP49-203ENST00000394253 RIOK3O14730 519 aaKnown RBP15□□□□□ -0.01
USP49-203ENST00000394253 RNF40O75150 1001 aa15□□□□□ -0.01
USP49-203ENST00000394253 SLC8A3P57103 927 aa15□□□□□ -0.01
USP49-203ENST00000394253 ZNF569Q5MCW4 686 aa15□□□□□ -0.01
USP49-203ENST00000394253 IWS1Q96ST2 819 aa15□□□□□ -0.01
USP49-203ENST00000394253 ARHGAP42A6NI28 874 aa14.99□□□□□ -0.01
USP49-203ENST00000394253 ARID5AQ03989 594 aa14.99□□□□□ -0.01
USP49-203ENST00000394253 TMED1Q13445 227 aa14.99□□□□□ -0.01
USP49-203ENST00000394253 NUCKS1Q9H1E3 243 aaKnown RBP14.99□□□□□ -0.01
USP49-203ENST00000394253 PARP2Q9UGN5 583 aa14.99□□□□□ -0.01
USP49-203ENST00000394253 FAM13AO94988 1023 aa14.99□□□□□ -0.01
USP49-203ENST00000394253 KLHL14Q9P2G3 628 aa14.99□□□□□ -0.01
USP49-203ENST00000394253 CCDC88BA6NC98 1476 aa14.99□□□□□ -0.01
USP49-203ENST00000394253 RIPOR2Q9Y4F9 1068 aa14.99□□□□□ -0.01
USP49-203ENST00000394253 IARSP41252 1262 aaKnown RBP14.99□□□□□ -0.01
USP49-203ENST00000394253 RRAGBQ5VZM2 374 aa14.99□□□□□ -0.01
USP49-203ENST00000394253 EVCP57679 992 aa14.99□□□□□ -0.01
USP49-203ENST00000394253 ABCC8Q09428 1581 aa14.99□□□□□ -0.01
USP49-203ENST00000394253 P3H4Q92791 437 aa14.99□□□□□ -0.01
USP49-203ENST00000394253 ZNF622Q969S3 477 aaKnown RBP eCLIP14.99□□□□□ -0.01
USP49-203ENST00000394253 ADAMTS8Q9UP79 889 aa14.99□□□□□ -0.01
USP49-203ENST00000394253 STK38LQ9Y2H1 464 aa14.99□□□□□ -0.01
USP49-203ENST00000394253 MTHFSP49914 203 aa14.99□□□□□ -0.01
USP49-203ENST00000394253 METAP2P50579 478 aaKnown RBP eCLIP14.99□□□□□ -0.01
USP49-203ENST00000394253 DUSP27Q5VZP5 1158 aa14.99□□□□□ -0.01
USP49-203ENST00000394253 VGLL3A8MV65 326 aa14.98□□□□□ -0.01
USP49-203ENST00000394253 GJC1P36383 396 aa14.98□□□□□ -0.01
USP49-203ENST00000394253 LZTFL1Q9NQ48 299 aa14.98□□□□□ -0.01
USP49-203ENST00000394253 CCDC125Q86Z20 511 aa14.98□□□□□ -0.01
USP49-203ENST00000394253 PPFIA4O75335 1185 aa14.98□□□□□ -0.01
USP49-203ENST00000394253 BCAR3O75815 825 aa14.98□□□□□ -0.01
USP49-203ENST00000394253 MRFAP1L1Q96HT8 127 aa14.98□□□□□ -0.01
USP49-203ENST00000394253 FRMD4BQ9Y2L6 1034 aa14.98□□□□□ -0.01
USP49-203ENST00000394253 METTL24Q5JXM2 366 aa14.98□□□□□ -0.01
USP49-203ENST00000394253 FAM71BQ8TC56 605 aa14.98□□□□□ -0.01
USP49-203ENST00000394253 VEZTQ9HBM0 779 aa14.98□□□□□ -0.01
USP49-203ENST00000394253 CABP4P57796 275 aa14.98□□□□□ -0.01
USP49-203ENST00000394253 ANKRD20A4Q4UJ75 823 aa14.98□□□□□ -0.01
USP49-203ENST00000394253 ANKRD20A8PQ5CZ79 823 aa14.98□□□□□ -0.01
USP49-203ENST00000394253 ANKRD20A2Q5SQ80 823 aa14.98□□□□□ -0.01
USP49-203ENST00000394253 ANKRD20A1Q5TYW2 823 aa14.98□□□□□ -0.01
USP49-203ENST00000394253 NLRP7Q8WX94 980 aa14.98□□□□□ -0.01
USP49-203ENST00000394253 PLCB4Q15147 1175 aa14.97□□□□□ -0.01
USP49-203ENST00000394253 NEK1Q96PY6 1258 aa14.97□□□□□ -0.01
USP49-203ENST00000394253 KCNA4P22459 653 aa14.97□□□□□ -0.01
USP49-203ENST00000394253 RTL1A6NKG5 1358 aa14.97□□□□□ -0.01
USP49-203ENST00000394253 LONP1P36776 959 aaKnown RBP14.97□□□□□ -0.01
USP49-203ENST00000394253 CCT6AP40227 531 aaKnown RBP14.97□□□□□ -0.01
USP49-203ENST00000394253 NAPGQ99747 312 aaPredicted RBP14.97□□□□□ -0.01
USP49-203ENST00000394253 A0A1B0GW55 424 aa14.97□□□□□ -0.01
USP49-203ENST00000394253 DUX4L2P0CJ85 424 aa14.97□□□□□ -0.01
USP49-203ENST00000394253 DUX4L3P0CJ86 424 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms