RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 KRT79Q5XKE5 535 aa14.87□□□□□ -0.03
LCA5-202ENST00000392959 ARFGAP2Q8N6H7 521 aa14.87□□□□□ -0.03
LCA5-202ENST00000392959 LMBR1Q8WVP7 490 aa14.87□□□□□ -0.03
LCA5-202ENST00000392959 ELP1O95163 1332 aa14.87□□□□□ -0.03
LCA5-202ENST00000392959 KRT13P13646 458 aa14.86□□□□□ -0.03
LCA5-202ENST00000392959 KRT2P35908 639 aa14.86□□□□□ -0.03
LCA5-202ENST00000392959 EVCP57679 992 aa14.86□□□□□ -0.03
LCA5-202ENST00000392959 G2E3Q7L622 706 aa14.86□□□□□ -0.03
LCA5-202ENST00000392959 RTL9Q8NET4 1388 aa14.86□□□□□ -0.03
LCA5-202ENST00000392959 FERMT2Q96AC1 680 aa14.86□□□□□ -0.03
LCA5-202ENST00000392959 C6orf50Q9HD87 102 aa14.86□□□□□ -0.03
LCA5-202ENST00000392959 RASAL2Q9UJF2 1139 aa14.86□□□□□ -0.03
LCA5-202ENST00000392959 DUOX2Q9NRD8 1548 aa14.86□□□□□ -0.03
LCA5-202ENST00000392959 ZFYVE9O95405 1425 aa14.86□□□□□ -0.03
LCA5-202ENST00000392959 NBPF6Q5VWK0 638 aa14.86□□□□□ -0.03
LCA5-202ENST00000392959 NBPF5PQ86XG9 351 aaPredicted RBP14.86□□□□□ -0.03
LCA5-202ENST00000392959 NBPF4Q96M43 638 aa14.86□□□□□ -0.03
LCA5-202ENST00000392959 CCDC77Q9BR77 488 aa14.86□□□□□ -0.03
LCA5-202ENST00000392959 NPATQ14207 1427 aa14.86□□□□□ -0.03
LCA5-202ENST00000392959 RPS6KB1P23443 525 aa14.86□□□□□ -0.03
LCA5-202ENST00000392959 TRAF1Q13077 416 aa14.86□□□□□ -0.03
LCA5-202ENST00000392959 FAM173BQ6P4H8 233 aa14.86□□□□□ -0.03
LCA5-202ENST00000392959 USP37Q86T82 979 aa14.86□□□□□ -0.03
LCA5-202ENST00000392959 CADPS2Q86UW7 1296 aa14.86□□□□□ -0.03
LCA5-202ENST00000392959 RXRAP19793 462 aa14.85□□□□□ -0.03
LCA5-202ENST00000392959 CHMP4BP1P59074 171 aa14.85□□□□□ -0.03
LCA5-202ENST00000392959 WDR78Q5VTH9 848 aa14.85□□□□□ -0.03
LCA5-202ENST00000392959 NBPF11Q86T75 865 aa14.85□□□□□ -0.03
LCA5-202ENST00000392959 MAP3K5Q99683 1374 aa14.85□□□□□ -0.03
LCA5-202ENST00000392959 U2AF2P26368 475 aaKnown RBP eCLIP14.85□□□□□ -0.03
LCA5-202ENST00000392959 PPP2R3AQ06190 1150 aa14.85□□□□□ -0.03
LCA5-202ENST00000392959 NFATC2IPQ8NCF5 419 aa14.85□□□□□ -0.03
LCA5-202ENST00000392959 A0A1W2PP64 1363 aa14.85□□□□□ -0.03
LCA5-202ENST00000392959 RNF123Q5XPI4 1314 aa14.85□□□□□ -0.03
LCA5-202ENST00000392959 MAGEB6P1A0A0J9YX57 407 aa14.85□□□□□ -0.03
LCA5-202ENST00000392959 AKR1B15C9JRZ8 316 aaPredicted RBP14.85□□□□□ -0.03
LCA5-202ENST00000392959 MICALL1Q8N3F8 863 aa14.85□□□□□ -0.03
LCA5-202ENST00000392959 NEK11Q8NG66 645 aa14.85□□□□□ -0.03
LCA5-202ENST00000392959 BICC1Q9H694 974 aaKnown RBP14.85□□□□□ -0.03
LCA5-202ENST00000392959 SGSM2O43147 1006 aa14.84□□□□□ -0.03
LCA5-202ENST00000392959 DTHD1Q6ZMT9 781 aa14.84□□□□□ -0.03
LCA5-202ENST00000392959 LRRC59Q96AG4 307 aaKnown RBP14.84□□□□□ -0.03
LCA5-202ENST00000392959 SNX14Q9Y5W7 946 aa14.84□□□□□ -0.03
LCA5-202ENST00000392959 OTUD6BQ8N6M0 293 aa14.84□□□□□ -0.03
LCA5-202ENST00000392959 GTF3C6Q969F1 213 aa14.84□□□□□ -0.03
LCA5-202ENST00000392959 DDX21Q9NR30 783 aaKnown RBP eCLIP14.84□□□□□ -0.03
LCA5-202ENST00000392959 NLRP3Q96P20 1036 aa14.84□□□□□ -0.03
LCA5-202ENST00000392959 CLSTN2Q9H4D0 955 aa14.84□□□□□ -0.03
LCA5-202ENST00000392959 HELLSQ9NRZ9 838 aa14.84□□□□□ -0.03
LCA5-202ENST00000392959 NPC1L1Q9UHC9 1359 aa14.84□□□□□ -0.03
LCA5-202ENST00000392959 ZEB2O60315 1214 aa14.84□□□□□ -0.03
LCA5-202ENST00000392959 MCM7P33993 719 aa14.84□□□□□ -0.03
LCA5-202ENST00000392959 GTF2A1P52655 376 aaPredicted RBP14.84□□□□□ -0.03
LCA5-202ENST00000392959 RILPL1Q5EBL4 403 aa14.84□□□□□ -0.03
LCA5-202ENST00000392959 HDXQ7Z353 690 aa14.84□□□□□ -0.03
LCA5-202ENST00000392959 PPP1R14CQ8TAE6 165 aa14.84□□□□□ -0.03
LCA5-202ENST00000392959 ZNF219Q9P2Y4 722 aaPredicted RBP14.84□□□□□ -0.03
LCA5-202ENST00000392959 TNRQ92752 1358 aa14.84□□□□□ -0.03
LCA5-202ENST00000392959 PLCH2O75038 1416 aa14.83□□□□□ -0.03
LCA5-202ENST00000392959 RIOK3O14730 519 aaKnown RBP14.83□□□□□ -0.03
LCA5-202ENST00000392959 KIF4AO95239 1232 aa14.83□□□□□ -0.03
LCA5-202ENST00000392959 CCDC122Q5T0U0 273 aa14.83□□□□□ -0.03
LCA5-202ENST00000392959 ZBTB9Q96C00 473 aa14.83□□□□□ -0.03
LCA5-202ENST00000392959 HELBQ8NG08 1087 aaPredicted RBP14.83□□□□□ -0.04
LCA5-202ENST00000392959 BICD1Q96G01 975 aa14.83□□□□□ -0.04
LCA5-202ENST00000392959 LLPHQ9BRT6 129 aaKnown RBP14.83□□□□□ -0.04
LCA5-202ENST00000392959 STMN4Q9H169 189 aaPredicted RBP14.83□□□□□ -0.04
LCA5-202ENST00000392959 SLC27A2O14975 620 aa14.83□□□□□ -0.04
LCA5-202ENST00000392959 GRIPAP1Q4V328 841 aa14.83□□□□□ -0.04
LCA5-202ENST00000392959 CCDC129Q6ZRS4 1044 aa14.83□□□□□ -0.04
LCA5-202ENST00000392959 MIGA1Q8NAN2 632 aa14.83□□□□□ -0.04
LCA5-202ENST00000392959 LMBRD1Q9NUN5 540 aa14.83□□□□□ -0.04
LCA5-202ENST00000392959 CCDC121Q6ZUS5 278 aa14.83□□□□□ -0.04
LCA5-202ENST00000392959 MAGEB6Q8N7X4 407 aa14.83□□□□□ -0.04
LCA5-202ENST00000392959 ANKS4BQ8N8V4 417 aa14.83□□□□□ -0.04
LCA5-202ENST00000392959 ATP10BO94823 1461 aa14.82□□□□□ -0.04
LCA5-202ENST00000392959 DNAJC21Q5F1R6 531 aaKnown RBP14.82□□□□□ -0.04
LCA5-202ENST00000392959 ANO1Q5XXA6 986 aa14.82□□□□□ -0.04
LCA5-202ENST00000392959 PPP1R9BQ96SB3 815 aa14.82□□□□□ -0.04
LCA5-202ENST00000392959 ARHGEF12Q9NZN5 1544 aa14.82□□□□□ -0.04
LCA5-202ENST00000392959 AOX1Q06278 1338 aa14.82□□□□□ -0.04
LCA5-202ENST00000392959 GNA11P29992 359 aa14.82□□□□□ -0.04
LCA5-202ENST00000392959 IFT81Q8WYA0 676 aa14.82□□□□□ -0.04
LCA5-202ENST00000392959 PAIP2Q9BPZ3 127 aaKnown RBP14.82□□□□□ -0.04
LCA5-202ENST00000392959 FERMT1Q9BQL6 677 aa14.82□□□□□ -0.04
LCA5-202ENST00000392959 IQCGQ9H095 443 aaKnown RBP14.82□□□□□ -0.04
LCA5-202ENST00000392959 DMRT2Q9Y5R5 561 aa14.82□□□□□ -0.04
LCA5-202ENST00000392959 EIF2AK4Q9P2K8 1649 aaKnown RBP14.82□□□□□ -0.04
LCA5-202ENST00000392959 BIVM-ERCC5R4GMW8 1640 aa14.82□□□□□ -0.04
LCA5-202ENST00000392959 URB2Q14146 1524 aaKnown RBP14.82□□□□□ -0.04
LCA5-202ENST00000392959 ZNF75DP51815 510 aa14.82□□□□□ -0.04
LCA5-202ENST00000392959 CFAP58Q5T655 872 aa14.82□□□□□ -0.04
LCA5-202ENST00000392959 SMAP1Q8IYB5 467 aaPredicted RBP14.82□□□□□ -0.04
LCA5-202ENST00000392959 MYRIPQ8NFW9 859 aa14.82□□□□□ -0.04
LCA5-202ENST00000392959 CEP63Q96MT8 703 aa14.82□□□□□ -0.04
LCA5-202ENST00000392959 CBX8Q9HC52 389 aa14.82□□□□□ -0.04
LCA5-202ENST00000392959 COL17A1Q9UMD9 1497 aaPredicted RBP14.82□□□□□ -0.04
LCA5-202ENST00000392959 TNNI2P48788 182 aa14.81□□□□□ -0.04
LCA5-202ENST00000392959 CCDC6Q16204 474 aa14.81□□□□□ -0.04
LCA5-202ENST00000392959 HS2ST1Q7LGA3 356 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms