RNA–Protein interactions for RNA: ENST00000392784.6

USP30-203, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 2 BASIC

Gene USP30, Length 2,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-203ENST00000392784 WDR33Q9C0J8 1336 aaKnown RBP11.05□□□□□ -0.64
USP30-203ENST00000392784 UBR3Q6ZT12 1888 aa11.05□□□□□ -0.64
USP30-203ENST00000392784 TCRBV5S4A2TA0A5A2 114 aa11.05□□□□□ -0.64
USP30-203ENST00000392784 JAK2O60674 1132 aa11.05□□□□□ -0.64
USP30-203ENST00000392784 ZPR1O75312 459 aa11.05□□□□□ -0.64
USP30-203ENST00000392784 ZFYP08048 801 aaPredicted RBP11.05□□□□□ -0.64
USP30-203ENST00000392784 ZSCAN22P10073 491 aaPredicted RBP11.05□□□□□ -0.64
USP30-203ENST00000392784 GTF2E1P29083 439 aaPredicted RBP11.05□□□□□ -0.64
USP30-203ENST00000392784 KLHL40Q2TBA0 621 aa11.05□□□□□ -0.64
USP30-203ENST00000392784 FAM196AQ6ZSG2 479 aa11.05□□□□□ -0.64
USP30-203ENST00000392784 ALDH8A1Q9H2A2 487 aaPredicted RBP11.05□□□□□ -0.64
USP30-203ENST00000392784 COL1A1P02452 1464 aaPredicted RBP11.05□□□□□ -0.64
USP30-203ENST00000392784 PPFIA3O75145 1194 aa11.04□□□□□ -0.64
USP30-203ENST00000392784 KLRK1P26718 216 aa11.04□□□□□ -0.64
USP30-203ENST00000392784 GYG1P46976 350 aa11.04□□□□□ -0.64
USP30-203ENST00000392784 APOBRQ0VD83 1088 aa11.04□□□□□ -0.64
USP30-203ENST00000392784 SF3B3Q15393 1217 aaKnown RBP11.04□□□□□ -0.64
USP30-203ENST00000392784 CAVIN1Q6NZI2 390 aaKnown RBP11.04□□□□□ -0.64
USP30-203ENST00000392784 NBPF5PQ86XG9 351 aaPredicted RBP11.04□□□□□ -0.64
USP30-203ENST00000392784 IL27Q8NEV9 243 aa11.04□□□□□ -0.64
USP30-203ENST00000392784 SETDB2Q96T68 719 aa11.04□□□□□ -0.64
USP30-203ENST00000392784 NBPF3Q9H094 633 aa11.04□□□□□ -0.64
USP30-203ENST00000392784 MTMR6Q9Y217 621 aa11.04□□□□□ -0.64
USP30-203ENST00000392784 GADD45BO75293 160 aaPredicted RBP11.04□□□□□ -0.64
USP30-203ENST00000392784 UQCRFS1P1P0C7P4 283 aa11.04□□□□□ -0.64
USP30-203ENST00000392784 EXOSC10Q01780 885 aaKnown RBP11.04□□□□□ -0.64
USP30-203ENST00000392784 SKOR2Q2VWA4 1001 aaPredicted RBP11.04□□□□□ -0.64
USP30-203ENST00000392784 ANKRD18AQ8IVF6 992 aa11.04□□□□□ -0.64
USP30-203ENST00000392784 CDC5LQ99459 802 aaKnown RBP11.04□□□□□ -0.64
USP30-203ENST00000392784 PANK2Q9BZ23 570 aa11.04□□□□□ -0.64
USP30-203ENST00000392784 CNPY2Q9Y2B0 182 aa11.04□□□□□ -0.64
USP30-203ENST00000392784 VPS37CA5D8V6 355 aaPredicted RBP11.03□□□□□ -0.64
USP30-203ENST00000392784 HSP90B1P14625 803 aaKnown RBP11.03□□□□□ -0.64
USP30-203ENST00000392784 CHD4Q14839 1912 aa11.03□□□□□ -0.64
USP30-203ENST00000392784 ANKRD1Q15327 319 aa11.03□□□□□ -0.64
USP30-203ENST00000392784 TPRNQ4KMQ1 711 aa11.03□□□□□ -0.64
USP30-203ENST00000392784 DHX32Q7L7V1 743 aaKnown RBP11.03□□□□□ -0.64
USP30-203ENST00000392784 TICAM2Q86XR7 235 aa11.03□□□□□ -0.64
USP30-203ENST00000392784 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.03□□□□□ -0.64
USP30-203ENST00000392784 GOLGA6L3A6NEY3 463 aa11.03□□□□□ -0.64
USP30-203ENST00000392784 F13A1P00488 732 aa11.03□□□□□ -0.64
USP30-203ENST00000392784 XRCC6P12956 609 aaKnown RBP eCLIP11.03□□□□□ -0.64
USP30-203ENST00000392784 SLC10A5Q5PT55 438 aa11.03□□□□□ -0.64
USP30-203ENST00000392784 CDC37L1Q7L3B6 337 aa11.03□□□□□ -0.64
USP30-203ENST00000392784 MAGEB6Q8N7X4 407 aa11.03□□□□□ -0.64
USP30-203ENST00000392784 GTF3C6Q969F1 213 aa11.03□□□□□ -0.64
USP30-203ENST00000392784 MINPP1Q9UNW1 487 aa11.03□□□□□ -0.64
USP30-203ENST00000392784 MYH13Q9UKX3 1938 aa11.02□□□□□ -0.64
USP30-203ENST00000392784 PTMSP20962 102 aa11.02□□□□□ -0.64
USP30-203ENST00000392784 SCRN1Q12765 414 aa11.02□□□□□ -0.64
USP30-203ENST00000392784 TTF1Q15361 905 aaPredicted RBP11.02□□□□□ -0.64
USP30-203ENST00000392784 LRRFIP1Q32MZ4 808 aaKnown RBP11.02□□□□□ -0.64
USP30-203ENST00000392784 FERMT3Q86UX7 667 aa11.02□□□□□ -0.64
USP30-203ENST00000392784 NCOA5Q9HCD5 579 aaKnown RBP11.02□□□□□ -0.64
USP30-203ENST00000392784 INCENPQ9NQS7 918 aa11.02□□□□□ -0.64
USP30-203ENST00000392784 TRIM37O94972 964 aa11.02□□□□□ -0.65
USP30-203ENST00000392784 CCT2P78371 535 aaKnown RBP11.02□□□□□ -0.65
USP30-203ENST00000392784 FGD1P98174 961 aa11.02□□□□□ -0.65
USP30-203ENST00000392784 FAM173BQ6P4H8 233 aa11.02□□□□□ -0.65
USP30-203ENST00000392784 USP48Q86UV5 1035 aa11.02□□□□□ -0.65
USP30-203ENST00000392784 TBC1D10CQ8IV04 446 aa11.02□□□□□ -0.65
USP30-203ENST00000392784 DDX11Q96FC9 970 aa11.02□□□□□ -0.65
USP30-203ENST00000392784 BCL11BQ9C0K0 894 aaPredicted RBP11.02□□□□□ -0.65
USP30-203ENST00000392784 BSDC1Q9NW68 430 aaPredicted RBP11.02□□□□□ -0.65
USP30-203ENST00000392784 RFC4P35249 363 aa11.01□□□□□ -0.65
USP30-203ENST00000392784 ANTXR2P58335 489 aa11.01□□□□□ -0.65
USP30-203ENST00000392784 NFIXQ14938 502 aa11.01□□□□□ -0.65
USP30-203ENST00000392784 UBE3CQ15386 1083 aa11.01□□□□□ -0.65
USP30-203ENST00000392784 RAB11FIP4Q86YS3 637 aa11.01□□□□□ -0.65
USP30-203ENST00000392784 ARMT1Q9H993 441 aa11.01□□□□□ -0.65
USP30-203ENST00000392784 EPB41L4AQ9HCS5 686 aaPredicted RBP11.01□□□□□ -0.65
USP30-203ENST00000392784 TMEM63CQ9P1W3 806 aa11.01□□□□□ -0.65
USP30-203ENST00000392784 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.01□□□□□ -0.65
USP30-203ENST00000392784 PRKAB2O43741 272 aa11.01□□□□□ -0.65
USP30-203ENST00000392784 MBD4O95243 580 aa11.01□□□□□ -0.65
USP30-203ENST00000392784 CTDNEP1O95476 244 aa11.01□□□□□ -0.65
USP30-203ENST00000392784 TM4SF1P30408 202 aa11.01□□□□□ -0.65
USP30-203ENST00000392784 FOSBP53539 338 aa11.01□□□□□ -0.65
USP30-203ENST00000392784 DNM1Q05193 864 aaKnown RBP11.01□□□□□ -0.65
USP30-203ENST00000392784 IMMTQ16891 758 aaKnown RBP11.01□□□□□ -0.65
USP30-203ENST00000392784 TRAPPC3LQ5T215 181 aa11.01□□□□□ -0.65
USP30-203ENST00000392784 LARP1BQ659C4 914 aaKnown RBP11.01□□□□□ -0.65
USP30-203ENST00000392784 ADGRA1Q86SQ6 560 aa11.01□□□□□ -0.65
USP30-203ENST00000392784 STRBPQ96SI9 672 aaKnown RBP11.01□□□□□ -0.65
USP30-203ENST00000392784 AGXT2Q9BYV1 514 aa11.01□□□□□ -0.65
USP30-203ENST00000392784 NAP1L2Q9ULW6 460 aaPredicted RBP11.01□□□□□ -0.65
USP30-203ENST00000392784 TACC3Q9Y6A5 838 aa11.01□□□□□ -0.65
USP30-203ENST00000392784 CACNA1SQ13698 1873 aa11.01□□□□□ -0.65
USP30-203ENST00000392784 ZNF804BA4D1E1 1349 aa11□□□□□ -0.65
USP30-203ENST00000392784 APPP05067 770 aa11□□□□□ -0.65
USP30-203ENST00000392784 ZSCAN23Q3MJ62 389 aa11□□□□□ -0.65
USP30-203ENST00000392784 ZSCAN25Q6NSZ9 544 aa11□□□□□ -0.65
USP30-203ENST00000392784 MB21D2Q8IYB1 491 aaPredicted RBP11□□□□□ -0.65
USP30-203ENST00000392784 MIGA1Q8NAN2 632 aa11□□□□□ -0.65
USP30-203ENST00000392784 NLRP3Q96P20 1036 aa11□□□□□ -0.65
USP30-203ENST00000392784 NYXQ9GZU5 481 aa11□□□□□ -0.65
USP30-203ENST00000392784 FIBPO43427 364 aa11□□□□□ -0.65
USP30-203ENST00000392784 HMGB1P09429 215 aaKnown RBP11□□□□□ -0.65
USP30-203ENST00000392784 RPS8P62241 208 aaKnown RBP11□□□□□ -0.65
USP30-203ENST00000392784 TPTE2Q6XPS3 522 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms