RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 MED23Q9ULK4 1368 aa13.79□□□□□ -0.2
TRAF3IP2-208ENST00000392556 CAPN15O75808 1086 aa13.79□□□□□ -0.2
TRAF3IP2-208ENST00000392556 CDK11BP21127 795 aaKnown RBP13.79□□□□□ -0.2
TRAF3IP2-208ENST00000392556 FMR1Q06787 632 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRAF3IP2-208ENST00000392556 DOK7Q18PE1 504 aa13.79□□□□□ -0.2
TRAF3IP2-208ENST00000392556 KIF4BQ2VIQ3 1234 aa13.79□□□□□ -0.2
TRAF3IP2-208ENST00000392556 RSBN1LQ6PCB5 846 aaPredicted RBP13.79□□□□□ -0.2
TRAF3IP2-208ENST00000392556 USP48Q86UV5 1035 aa13.79□□□□□ -0.2
TRAF3IP2-208ENST00000392556 REM2Q8IYK8 340 aaPredicted RBP13.79□□□□□ -0.2
TRAF3IP2-208ENST00000392556 C2orf69Q8N8R5 385 aa13.79□□□□□ -0.2
TRAF3IP2-208ENST00000392556 MYO3BQ8WXR4 1341 aa13.79□□□□□ -0.2
TRAF3IP2-208ENST00000392556 IGKV5-2P06315 115 aa13.78□□□□□ -0.2
TRAF3IP2-208ENST00000392556 FKBP1BP68106 108 aa13.78□□□□□ -0.2
TRAF3IP2-208ENST00000392556 SULF1Q8IWU6 871 aa13.78□□□□□ -0.2
TRAF3IP2-208ENST00000392556 PLCD3Q8N3E9 789 aa13.78□□□□□ -0.2
TRAF3IP2-208ENST00000392556 TSPYL6Q8N831 410 aa13.78□□□□□ -0.2
TRAF3IP2-208ENST00000392556 TTLL11Q8NHH1 800 aa13.78□□□□□ -0.2
TRAF3IP2-208ENST00000392556 CCDC102AQ96A19 550 aa13.78□□□□□ -0.2
TRAF3IP2-208ENST00000392556 ZFP91Q96JP5 570 aaPredicted RBP13.78□□□□□ -0.2
TRAF3IP2-208ENST00000392556 PITPNM2Q9BZ72 1349 aa13.78□□□□□ -0.2
TRAF3IP2-208ENST00000392556 TAF1P21675 1872 aa13.78□□□□□ -0.2
TRAF3IP2-208ENST00000392556 NEURL1BA8MQ27 555 aa13.78□□□□□ -0.2
TRAF3IP2-208ENST00000392556 H7C1W4 665 aa13.78□□□□□ -0.2
TRAF3IP2-208ENST00000392556 BRD2P25440 801 aaKnown RBP13.78□□□□□ -0.2
TRAF3IP2-208ENST00000392556 TBC1D10BQ4KMP7 808 aaPredicted RBP13.78□□□□□ -0.2
TRAF3IP2-208ENST00000392556 SAMD7Q7Z3H4 446 aa13.78□□□□□ -0.2
TRAF3IP2-208ENST00000392556 ANKRD2Q9GZV1 360 aa13.78□□□□□ -0.2
TRAF3IP2-208ENST00000392556 LEMD3Q9Y2U8 911 aa13.78□□□□□ -0.2
TRAF3IP2-208ENST00000392556 USP17L3A6NCW0 530 aa13.77□□□□□ -0.21
TRAF3IP2-208ENST00000392556 USP17L4A6NCW7 530 aa13.77□□□□□ -0.21
TRAF3IP2-208ENST00000392556 SLC4A2P04920 1241 aa13.77□□□□□ -0.21
TRAF3IP2-208ENST00000392556 IGHMBP2P38935 993 aaKnown RBP13.77□□□□□ -0.21
TRAF3IP2-208ENST00000392556 DNTTIP2Q5QJE6 756 aaKnown RBP13.77□□□□□ -0.21
TRAF3IP2-208ENST00000392556 USP17L1Q7RTZ2 530 aa13.77□□□□□ -0.21
TRAF3IP2-208ENST00000392556 ARID3AQ99856 593 aa13.77□□□□□ -0.21
TRAF3IP2-208ENST00000392556 ZNF408Q9H9D4 720 aa13.77□□□□□ -0.21
TRAF3IP2-208ENST00000392556 GBA2Q9HCG7 927 aaPredicted RBP13.77□□□□□ -0.21
TRAF3IP2-208ENST00000392556 HUNKP57058 714 aa13.76□□□□□ -0.21
TRAF3IP2-208ENST00000392556 CBX1P83916 185 aa13.76□□□□□ -0.21
TRAF3IP2-208ENST00000392556 LINS1Q8NG48 757 aa13.76□□□□□ -0.21
TRAF3IP2-208ENST00000392556 TSR2Q969E8 191 aaKnown RBP13.76□□□□□ -0.21
TRAF3IP2-208ENST00000392556 ZNF428Q96B54 188 aa13.76□□□□□ -0.21
TRAF3IP2-208ENST00000392556 PRIMPOLQ96LW4 560 aa13.76□□□□□ -0.21
TRAF3IP2-208ENST00000392556 COA1Q9GZY4 146 aa13.76□□□□□ -0.21
TRAF3IP2-208ENST00000392556 IGHDP01880 384 aa13.76□□□□□ -0.21
TRAF3IP2-208ENST00000392556 USP17L8P0C7I0 530 aa13.76□□□□□ -0.21
TRAF3IP2-208ENST00000392556 ZNF445P59923 1031 aa13.76□□□□□ -0.21
TRAF3IP2-208ENST00000392556 FLIIQ13045 1269 aa13.76□□□□□ -0.21
TRAF3IP2-208ENST00000392556 RGMBQ6NW40 437 aa13.76□□□□□ -0.21
TRAF3IP2-208ENST00000392556 GMLQ99445 158 aa13.76□□□□□ -0.21
TRAF3IP2-208ENST00000392556 SAGE1Q9NXZ1 904 aa13.76□□□□□ -0.21
TRAF3IP2-208ENST00000392556 MINPP1Q9UNW1 487 aa13.76□□□□□ -0.21
TRAF3IP2-208ENST00000392556 GRM1Q13255 1194 aa13.75□□□□□ -0.21
TRAF3IP2-208ENST00000392556 GCKRQ14397 625 aa13.75□□□□□ -0.21
TRAF3IP2-208ENST00000392556 TNPO1Q92973 898 aaKnown RBP13.75□□□□□ -0.21
TRAF3IP2-208ENST00000392556 DNAJC2Q99543 621 aaKnown RBP13.75□□□□□ -0.21
TRAF3IP2-208ENST00000392556 COL4A1P02462 1669 aa13.75□□□□□ -0.21
TRAF3IP2-208ENST00000392556 SHTN1A0MZ66 631 aa13.75□□□□□ -0.21
TRAF3IP2-208ENST00000392556 CCT4P50991 539 aaKnown RBP13.75□□□□□ -0.21
TRAF3IP2-208ENST00000392556 HMGN5P82970 282 aaKnown RBP13.75□□□□□ -0.21
TRAF3IP2-208ENST00000392556 RAB3GAP1Q15042 981 aa13.75□□□□□ -0.21
TRAF3IP2-208ENST00000392556 ZNF710Q8N1W2 664 aa13.75□□□□□ -0.21
TRAF3IP2-208ENST00000392556 DNAAF4Q8WXU2 420 aa13.75□□□□□ -0.21
TRAF3IP2-208ENST00000392556 CSF1RP07333 972 aa13.74□□□□□ -0.21
TRAF3IP2-208ENST00000392556 STRIP1Q5VSL9 837 aa13.74□□□□□ -0.21
TRAF3IP2-208ENST00000392556 CLEC17AQ6ZS10 378 aa13.74□□□□□ -0.21
TRAF3IP2-208ENST00000392556 SMC5Q8IY18 1101 aa13.74□□□□□ -0.21
TRAF3IP2-208ENST00000392556 GREM2Q9H772 168 aa13.74□□□□□ -0.21
TRAF3IP2-208ENST00000392556 KCNQ5Q9NR82 932 aa13.74□□□□□ -0.21
TRAF3IP2-208ENST00000392556 GGA3Q9NZ52 723 aa13.74□□□□□ -0.21
TRAF3IP2-208ENST00000392556 PSME4Q14997 1843 aa13.74□□□□□ -0.21
TRAF3IP2-208ENST00000392556 AOC2O75106 756 aa13.73□□□□□ -0.21
TRAF3IP2-208ENST00000392556 ATP2B3Q16720 1220 aa13.73□□□□□ -0.21
TRAF3IP2-208ENST00000392556 RBM26Q5T8P6 1007 aaKnown RBP13.73□□□□□ -0.21
TRAF3IP2-208ENST00000392556 UBE3BQ7Z3V4 1068 aa13.73□□□□□ -0.21
TRAF3IP2-208ENST00000392556 OGFOD1Q8N543 542 aa13.73□□□□□ -0.21
TRAF3IP2-208ENST00000392556 SPRYD3Q8NCJ5 442 aa13.73□□□□□ -0.21
TRAF3IP2-208ENST00000392556 ABHD8Q96I13 439 aa13.73□□□□□ -0.21
TRAF3IP2-208ENST00000392556 MYOZ2Q9NPC6 264 aa13.73□□□□□ -0.21
TRAF3IP2-208ENST00000392556 CCDC39Q9UFE4 941 aa13.73□□□□□ -0.21
TRAF3IP2-208ENST00000392556 CACNA1FO60840 1977 aa13.73□□□□□ -0.21
TRAF3IP2-208ENST00000392556 IRX3P78415 501 aaPredicted RBP13.73□□□□□ -0.21
TRAF3IP2-208ENST00000392556 FKBP5Q13451 457 aaPredicted RBP13.73□□□□□ -0.21
TRAF3IP2-208ENST00000392556 CWF19L2Q2TBE0 894 aaKnown RBP13.73□□□□□ -0.21
TRAF3IP2-208ENST00000392556 HSCBQ8IWL3 235 aa13.73□□□□□ -0.21
TRAF3IP2-208ENST00000392556 MPHOSPH8Q99549 860 aa13.73□□□□□ -0.21
TRAF3IP2-208ENST00000392556 VAMP4O75379 141 aa13.72□□□□□ -0.21
TRAF3IP2-208ENST00000392556 SCARF1Q14162 830 aa13.72□□□□□ -0.21
TRAF3IP2-208ENST00000392556 KLHL40Q2TBA0 621 aa13.72□□□□□ -0.21
TRAF3IP2-208ENST00000392556 SNX21Q969T3 373 aa13.72□□□□□ -0.21
TRAF3IP2-208ENST00000392556 CCDC85AQ96PX6 553 aaPredicted RBP13.72□□□□□ -0.21
TRAF3IP2-208ENST00000392556 MYH3P11055 1940 aa13.72□□□□□ -0.21
TRAF3IP2-208ENST00000392556 EGFRP00533 1210 aa13.72□□□□□ -0.21
TRAF3IP2-208ENST00000392556 IRX5P78411 483 aaPredicted RBP13.72□□□□□ -0.21
TRAF3IP2-208ENST00000392556 G2E3Q7L622 706 aa13.72□□□□□ -0.21
TRAF3IP2-208ENST00000392556 JARID2Q92833 1246 aaPredicted RBP13.72□□□□□ -0.21
TRAF3IP2-208ENST00000392556 CDCA5Q96FF9 252 aa13.72□□□□□ -0.21
TRAF3IP2-208ENST00000392556 CGNQ9P2M7 1197 aaKnown RBP13.72□□□□□ -0.21
TRAF3IP2-208ENST00000392556 ADM5C9JUS6 153 aa13.71□□□□□ -0.21
TRAF3IP2-208ENST00000392556 ITGA6P23229 1130 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms