RNA–Protein interactions for RNA: ENST00000391200.1

SNORA40.18-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.18-201ENST00000391200 VEGFAP15692 232 aaPredicted RBP2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 PIP4K2AP48426 406 aaPredicted RBP2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 TGFB2P61812 414 aa2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 GRIK4Q16099 956 aa2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 GRIPAP1Q4V328 841 aa2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 PLEKHO1Q53GL0 409 aaPredicted RBP2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 USPL1Q5W0Q7 1092 aa2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 PRICKLE2Q7Z3G6 844 aa2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 C2CD5Q86YS7 1000 aa2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 IFNL2Q8IZJ0 200 aa2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 GMCL1Q96IK5 515 aa2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 CCDC87Q9NVE4 849 aa2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 ZBTB4Q9P1Z0 1013 aaPredicted RBP2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 GDF2Q9UK05 429 aaPredicted RBP2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 NSFL1CQ9UNZ2 370 aaKnown RBP2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 TBC1D2BQ9UPU7 963 aa2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 VIRMAQ69YN4 1812 aaKnown RBP2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 WNK3Q9BYP7 1800 aa2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 UBR3Q6ZT12 1888 aa2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 ANKRD36BQ8N2N9 1353 aa2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 NHSQ6T4R5 1651 aa2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 TOPAZ1Q8N9V7 1692 aa2.6□□□□□ -1.99
SNORA40.18-201ENST00000391200 CPSF1Q10570 1443 aaKnown RBP2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 LY75O60449 1722 aa2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 A1BGP04217 495 aa2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 SERPINB2P05120 415 aa2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 HMOX1P09601 288 aa2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 HSPA1AP0DMV8 641 aaKnown RBP2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 HSPA1BP0DMV9 641 aaKnown RBP2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 PHKG2P15735 406 aa2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 TM4SF1P30408 202 aa2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 CRKLP46109 303 aaKnown RBP2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 PRELPP51888 382 aa2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 FMR1Q06787 632 aaKnown RBP eCLIP2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 EAPPQ56P03 285 aaPredicted RBP2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 C1orf141Q5JVX7 400 aa2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 PPP1R26Q5T8A7 1209 aaPredicted RBP2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 SULT6B1Q6IMI4 303 aa2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 ZNF530Q6P9A1 599 aaPredicted RBP2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 INTS5Q6P9B9 1019 aaKnown RBP2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 LILRA6Q6PI73 481 aa2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 OLFM4Q6UX06 510 aa2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 PAXIP1Q6ZW49 1069 aaPredicted RBP2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 LYSMD3Q7Z3D4 306 aa2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 MORC1Q86VD1 984 aa2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 AEBP1Q8IUX7 1158 aa2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 DNAJC10Q8IXB1 793 aa2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 POU5F2Q8N7G0 328 aa2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 TRERF1Q96PN7 1200 aa2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 PANK3Q9H999 370 aa2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 POLKQ9UBT6 870 aa2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 GJA3Q9Y6H8 435 aa2.59□□□□□ -1.99
SNORA40.18-201ENST00000391200 KDM2BQ8NHM5 1336 aa2.59□□□□□ -2
SNORA40.18-201ENST00000391200 C5P01031 1676 aa2.59□□□□□ -2
SNORA40.18-201ENST00000391200 PALLDQ8WX93 1383 aa2.59□□□□□ -2
SNORA40.18-201ENST00000391200 SBNO2Q9Y2G9 1366 aa2.59□□□□□ -2
SNORA40.18-201ENST00000391200 PRAG1Q86YV5 1406 aa2.59□□□□□ -2
SNORA40.18-201ENST00000391200 AFDNP55196 1824 aaKnown RBP2.58□□□□□ -2
SNORA40.18-201ENST00000391200 SLX4Q8IY92 1834 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 TAF1P21675 1872 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 GLTPD2A6NH11 291 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 ERVV-2B6SEH9 535 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 PIK3R2O00459 728 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 SSFA2P28290 1259 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 LBX1P52954 281 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 DDR1Q08345 913 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 EIF4A2Q14240 407 aaKnown RBP2.58□□□□□ -2
SNORA40.18-201ENST00000391200 NFIXQ14938 502 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 ERFEQ4G0M1 354 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 CHSY3Q70JA7 882 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 NPM2Q86SE8 214 aaKnown RBP2.58□□□□□ -2
SNORA40.18-201ENST00000391200 CCDC116Q8IYX3 515 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 GOLGA6L1Q8N7Z2 621 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 TTLL6Q8N841 843 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 KDF1Q8NAX2 398 aaPredicted RBP2.58□□□□□ -2
SNORA40.18-201ENST00000391200 SMC1BQ8NDV3 1235 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 TP53INP1Q96A56 240 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 TESK2Q96S53 571 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 GAS2L1Q99501 681 aaPredicted RBP2.58□□□□□ -2
SNORA40.18-201ENST00000391200 MIS18AQ9NYP9 233 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 A0A1W2PP64 1363 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 USP31Q70CQ4 1352 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 SLIT3O75094 1523 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 KCPQ6ZWJ8 1503 aa2.58□□□□□ -2
SNORA40.18-201ENST00000391200 C4BP0C0L5 1744 aa2.57□□□□□ -2
SNORA40.18-201ENST00000391200 QSER1Q2KHR3 1735 aa2.57□□□□□ -2
SNORA40.18-201ENST00000391200 MON2Q7Z3U7 1717 aa2.57□□□□□ -2
SNORA40.18-201ENST00000391200 RGPD3A6NKT7 1758 aaPredicted RBP2.57□□□□□ -2
SNORA40.18-201ENST00000391200 RGPD4Q7Z3J3 1758 aa2.57□□□□□ -2
SNORA40.18-201ENST00000391200 TNRC18O15417 2968 aaPredicted RBP2.57□□□□□ -2
SNORA40.18-201ENST00000391200 U2SURPO15042 1029 aaKnown RBP2.57□□□□□ -2
SNORA40.18-201ENST00000391200 FOXN1O15353 648 aa2.57□□□□□ -2
SNORA40.18-201ENST00000391200 KCNQ3O43525 872 aa2.57□□□□□ -2
SNORA40.18-201ENST00000391200 OATP04181 439 aa2.57□□□□□ -2
SNORA40.18-201ENST00000391200 CYP19A1P11511 503 aaPredicted RBP2.57□□□□□ -2
SNORA40.18-201ENST00000391200 LMNB1P20700 586 aa2.57□□□□□ -2
SNORA40.18-201ENST00000391200 HMGB2P26583 209 aaKnown RBP2.57□□□□□ -2
SNORA40.18-201ENST00000391200 GTF2E1P29083 439 aaPredicted RBP2.57□□□□□ -2
SNORA40.18-201ENST00000391200 MLLT3P42568 568 aaPredicted RBP2.57□□□□□ -2
SNORA40.18-201ENST00000391200 CD97P48960 835 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms