RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 BMP3P12645 472 aa2.56□□□□□ -2
SNORD28B-201ENST00000390993 GSTM4Q03013 218 aa2.56□□□□□ -2
SNORD28B-201ENST00000390993 ZNF211Q13398 564 aaPredicted RBP2.56□□□□□ -2
SNORD28B-201ENST00000390993 FAM26DQ5JW98 314 aa2.56□□□□□ -2
SNORD28B-201ENST00000390993 RNF43Q68DV7 783 aa2.56□□□□□ -2
SNORD28B-201ENST00000390993 PAOXQ6QHF9 649 aa2.56□□□□□ -2
SNORD28B-201ENST00000390993 BEND4Q6ZU67 534 aa2.56□□□□□ -2
SNORD28B-201ENST00000390993 C12orf50Q8NA57 414 aaPredicted RBP2.56□□□□□ -2
SNORD28B-201ENST00000390993 GALNT11Q8NCW6 608 aa2.56□□□□□ -2
SNORD28B-201ENST00000390993 NXPE3Q969Y0 559 aa2.56□□□□□ -2
SNORD28B-201ENST00000390993 ARID3AQ99856 593 aa2.56□□□□□ -2
SNORD28B-201ENST00000390993 DBNDD2Q9BQY9 259 aa2.56□□□□□ -2
SNORD28B-201ENST00000390993 BHLHE41Q9C0J9 482 aaPredicted RBP2.56□□□□□ -2
SNORD28B-201ENST00000390993 TUT1Q9H6E5 874 aaKnown RBP2.56□□□□□ -2
SNORD28B-201ENST00000390993 LIN7BQ9HAP6 207 aa2.56□□□□□ -2
SNORD28B-201ENST00000390993 ZFYVE28Q9HCC9 887 aa2.56□□□□□ -2
SNORD28B-201ENST00000390993 SH2B1Q9NRF2 756 aaPredicted RBP2.56□□□□□ -2
SNORD28B-201ENST00000390993 RAD18Q9NS91 495 aa2.56□□□□□ -2
SNORD28B-201ENST00000390993 A6NHS1 94 aa2.55□□□□□ -2
SNORD28B-201ENST00000390993 DDX3YO15523 660 aaKnown RBP2.55□□□□□ -2
SNORD28B-201ENST00000390993 PAX4O43316 350 aa2.55□□□□□ -2
SNORD28B-201ENST00000390993 CPNE3O75131 537 aaKnown RBP2.55□□□□□ -2
SNORD28B-201ENST00000390993 GADD45BO75293 160 aaPredicted RBP2.55□□□□□ -2
SNORD28B-201ENST00000390993 SSTR4P31391 388 aa2.55□□□□□ -2
SNORD28B-201ENST00000390993 PCDH1Q08174 1060 aa2.55□□□□□ -2
SNORD28B-201ENST00000390993 NFIAQ12857 509 aa2.55□□□□□ -2
SNORD28B-201ENST00000390993 MTMR3Q13615 1198 aa2.55□□□□□ -2
SNORD28B-201ENST00000390993 CPSF6Q16630 551 aaKnown RBP eCLIP2.55□□□□□ -2
SNORD28B-201ENST00000390993 EXOSC6Q5RKV6 272 aaKnown RBP2.55□□□□□ -2
SNORD28B-201ENST00000390993 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.55□□□□□ -2
SNORD28B-201ENST00000390993 KIAA1211Q6ZU35 1233 aa2.55□□□□□ -2
SNORD28B-201ENST00000390993 FAM20CQ8IXL6 584 aa2.55□□□□□ -2
SNORD28B-201ENST00000390993 GJD3Q8N144 294 aa2.55□□□□□ -2
SNORD28B-201ENST00000390993 UBASH3BQ8TF42 649 aa2.55□□□□□ -2
SNORD28B-201ENST00000390993 FOXD4L4Q8WXT5 416 aaPredicted RBP2.55□□□□□ -2
SNORD28B-201ENST00000390993 FAM46AQ96IP4 442 aaKnown RBP2.55□□□□□ -2
SNORD28B-201ENST00000390993 UBL7Q96S82 380 aaPredicted RBP2.55□□□□□ -2
SNORD28B-201ENST00000390993 FAM83CQ9BQN1 747 aa2.55□□□□□ -2
SNORD28B-201ENST00000390993 CORO1BQ9BR76 489 aa2.55□□□□□ -2
SNORD28B-201ENST00000390993 ZKSCAN3Q9BRR0 538 aa2.55□□□□□ -2
SNORD28B-201ENST00000390993 METTL22Q9BUU2 404 aaPredicted RBP2.55□□□□□ -2
SNORD28B-201ENST00000390993 OSBPL1AQ9BXW6 950 aa2.55□□□□□ -2
SNORD28B-201ENST00000390993 EHD4Q9H223 541 aa2.55□□□□□ -2
SNORD28B-201ENST00000390993 CLEC4MQ9H2X3 399 aaPredicted RBP2.55□□□□□ -2
SNORD28B-201ENST00000390993 C7orf69Q9H7B7 122 aa2.55□□□□□ -2
SNORD28B-201ENST00000390993 ANO2Q9NQ90 1003 aa2.55□□□□□ -2
SNORD28B-201ENST00000390993 SLAIN2Q9P270 581 aa2.55□□□□□ -2
SNORD28B-201ENST00000390993 FOXD3Q9UJU5 478 aaPredicted RBP2.55□□□□□ -2
SNORD28B-201ENST00000390993 SOX13Q9UN79 622 aa2.55□□□□□ -2
SNORD28B-201ENST00000390993 TRAK1Q9UPV9 953 aa2.55□□□□□ -2
SNORD28B-201ENST00000390993 A0A096LPE4 126 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 A0A1W2PPZ6 126 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 WDR64B1ANS9 1081 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 FZD6O60353 706 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 TRPA1O75762 1119 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 WISP1O95388 367 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 ITGB7P26010 798 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 MAP4P27816 1152 aaKnown RBP2.54□□□□□ -2
SNORD28B-201ENST00000390993 IRAK1P51617 712 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 CYP27A1Q02318 531 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 AP3B2Q13367 1082 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 MAP7Q14244 749 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 POU4F3Q15319 338 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 NFKBIBQ15653 356 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 DUSP27Q5VZP5 1158 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 TRIM42Q8IWZ5 723 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 GALNT12Q8IXK2 581 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 SMG8Q8ND04 991 aaKnown RBP2.54□□□□□ -2
SNORD28B-201ENST00000390993 DMRTB1Q96MA1 342 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 DNAJC25Q9H1X3 360 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 CHRDQ9H2X0 955 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 SUGCTQ9HAC7 445 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 CCDC87Q9NVE4 849 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 NLRP2Q9NX02 1062 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 KCNK4Q9NYG8 393 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 ANGEL1Q9UNK9 670 aaKnown RBP2.54□□□□□ -2
SNORD28B-201ENST00000390993 LEMD3Q9Y2U8 911 aa2.54□□□□□ -2
SNORD28B-201ENST00000390993 LOC100289279A0A1B0GTE1 492 aa2.53□□□□□ -2
SNORD28B-201ENST00000390993 FAM95CA0A1B0GW59 222 aa2.53□□□□□ -2
SNORD28B-201ENST00000390993 HMX2A2RU54 273 aa2.53□□□□□ -2
SNORD28B-201ENST00000390993 PATL2C9JE40 543 aaKnown RBP2.53□□□□□ -2
SNORD28B-201ENST00000390993 NFKBIEO00221 500 aa2.53□□□□□ -2
SNORD28B-201ENST00000390993 SOX1O00570 391 aaPredicted RBP2.53□□□□□ -2
SNORD28B-201ENST00000390993 ADAM11O75078 769 aa2.53□□□□□ -2
SNORD28B-201ENST00000390993 SLFN14P0C7P3 912 aa2.53□□□□□ -2
SNORD28B-201ENST00000390993 ESRRAP11474 423 aaPredicted RBP2.53□□□□□ -2
SNORD28B-201ENST00000390993 ACPPP15309 386 aa2.53□□□□□ -2
SNORD28B-201ENST00000390993 PREPP48147 710 aa2.53□□□□□ -2
SNORD28B-201ENST00000390993 PTPN12Q05209 780 aaKnown RBP2.53□□□□□ -2
SNORD28B-201ENST00000390993 PPP2R3AQ06190 1150 aa2.53□□□□□ -2
SNORD28B-201ENST00000390993 PDE3AQ14432 1141 aa2.53□□□□□ -2
SNORD28B-201ENST00000390993 KIAA0319Q5VV43 1072 aa2.53□□□□□ -2
SNORD28B-201ENST00000390993 VN1R5Q7Z5H4 357 aa2.53□□□□□ -2
SNORD28B-201ENST00000390993 CCNJLQ8IV13 435 aa2.53□□□□□ -2
SNORD28B-201ENST00000390993 ARMC10Q8N2F6 343 aa2.53□□□□□ -2
SNORD28B-201ENST00000390993 SHKBP1Q8TBC3 707 aa2.53□□□□□ -2
SNORD28B-201ENST00000390993 TMPRSS13Q9BYE2 586 aa2.53□□□□□ -2
SNORD28B-201ENST00000390993 PIM2Q9P1W9 311 aa2.53□□□□□ -2
SNORD28B-201ENST00000390993 BIN2Q9UBW5 565 aaPredicted RBP2.53□□□□□ -2
SNORD28B-201ENST00000390993 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms