RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 WASHC4Q2M389 1173 aa22.85■■□□□ 1.25
GMDS-201ENST00000380805 E7EWF7 191 aa22.84■■□□□ 1.25
GMDS-201ENST00000380805 TBC1D9BQ66K14 1250 aa22.84■■□□□ 1.25
GMDS-201ENST00000380805 NECAB1Q8N987 351 aa22.84■■□□□ 1.25
GMDS-201ENST00000380805 HELBQ8NG08 1087 aaPredicted RBP22.84■■□□□ 1.25
GMDS-201ENST00000380805 GTF3C6Q969F1 213 aa22.84■■□□□ 1.25
GMDS-201ENST00000380805 NYXQ9GZU5 481 aa22.84■■□□□ 1.25
GMDS-201ENST00000380805 TCRBV5S4A2TA0A5A2 114 aa22.83■■□□□ 1.25
GMDS-201ENST00000380805 GPAA1O43292 621 aa22.83■■□□□ 1.25
GMDS-201ENST00000380805 F13A1P00488 732 aa22.83■■□□□ 1.25
GMDS-201ENST00000380805 Q6ZUG5 572 aa22.83■■□□□ 1.25
GMDS-201ENST00000380805 MTMR6Q9Y217 621 aa22.83■■□□□ 1.25
GMDS-201ENST00000380805 TAF1P21675 1872 aa22.83■■□□□ 1.25
GMDS-201ENST00000380805 MBD3O95983 291 aa22.82■■□□□ 1.24
GMDS-201ENST00000380805 CHRNDQ07001 517 aa22.82■■□□□ 1.24
GMDS-201ENST00000380805 FOXD4L5Q5VV16 416 aaPredicted RBP22.82■■□□□ 1.24
GMDS-201ENST00000380805 SPATA5Q8NB90 893 aa22.82■■□□□ 1.24
GMDS-201ENST00000380805 FOXD4L4Q8WXT5 416 aaPredicted RBP22.82■■□□□ 1.24
GMDS-201ENST00000380805 ATP6V1DQ9Y5K8 247 aa22.82■■□□□ 1.24
GMDS-201ENST00000380805 RASGRF1Q13972 1273 aa22.82■■□□□ 1.24
GMDS-201ENST00000380805 SLC9C2Q5TAH2 1124 aa22.82■■□□□ 1.24
GMDS-201ENST00000380805 GPT2Q8TD30 523 aa22.82■■□□□ 1.24
GMDS-201ENST00000380805 CHAMP1Q96JM3 812 aa22.82■■□□□ 1.24
GMDS-201ENST00000380805 GNPATO15228 680 aa22.81■■□□□ 1.24
GMDS-201ENST00000380805 PDE6AP16499 860 aa22.81■■□□□ 1.24
GMDS-201ENST00000380805 PDCP20941 246 aa22.81■■□□□ 1.24
GMDS-201ENST00000380805 SLC27A3Q5K4L6 730 aa22.81■■□□□ 1.24
GMDS-201ENST00000380805 C3orf67Q6ZVT6 689 aa22.81■■□□□ 1.24
GMDS-201ENST00000380805 BSDC1Q9NW68 430 aaPredicted RBP22.81■■□□□ 1.24
GMDS-201ENST00000380805 RTCBQ9Y3I0 505 aaKnown RBP22.81■■□□□ 1.24
GMDS-201ENST00000380805 ZNF804BA4D1E1 1349 aa22.81■■□□□ 1.24
GMDS-201ENST00000380805 ZMYM6O95789 1325 aa22.81■■□□□ 1.24
GMDS-201ENST00000380805 RGPD3A6NKT7 1758 aaPredicted RBP22.81■■□□□ 1.24
GMDS-201ENST00000380805 RGPD4Q7Z3J3 1758 aa22.81■■□□□ 1.24
GMDS-201ENST00000380805 UBR3Q6ZT12 1888 aa22.8■■□□□ 1.24
GMDS-201ENST00000380805 FGAP02671 866 aa22.8■■□□□ 1.24
GMDS-201ENST00000380805 MRE11P49959 708 aa22.8■■□□□ 1.24
GMDS-201ENST00000380805 ZNF445P59923 1031 aa22.8■■□□□ 1.24
GMDS-201ENST00000380805 IMMTQ16891 758 aaKnown RBP22.8■■□□□ 1.24
GMDS-201ENST00000380805 ANKRD18AQ8IVF6 992 aa22.8■■□□□ 1.24
GMDS-201ENST00000380805 WDR19Q8NEZ3 1342 aa22.8■■□□□ 1.24
GMDS-201ENST00000380805 A0A0G2JLW4 131 aa22.79■■□□□ 1.24
GMDS-201ENST00000380805 EVCP57679 992 aa22.79■■□□□ 1.24
GMDS-201ENST00000380805 TTLL5Q6EMB2 1281 aa22.79■■□□□ 1.24
GMDS-201ENST00000380805 ZNF532Q9HCE3 1301 aa22.79■■□□□ 1.24
GMDS-201ENST00000380805 PFKFB2O60825 505 aa22.79■■□□□ 1.24
GMDS-201ENST00000380805 LLPHQ9BRT6 129 aaKnown RBP22.79■■□□□ 1.24
GMDS-201ENST00000380805 TIAM2Q8IVF5 1701 aa22.78■■□□□ 1.24
GMDS-201ENST00000380805 ZPR1O75312 459 aa22.78■■□□□ 1.24
GMDS-201ENST00000380805 IDH1O75874 414 aaKnown RBP22.78■■□□□ 1.24
GMDS-201ENST00000380805 UBE4AQ14139 1066 aa22.78■■□□□ 1.24
GMDS-201ENST00000380805 BRF1Q92994 677 aa22.78■■□□□ 1.24
GMDS-201ENST00000380805 SETDB2Q96T68 719 aa22.78■■□□□ 1.24
GMDS-201ENST00000380805 SRP68Q9UHB9 627 aaKnown RBP22.78■■□□□ 1.24
GMDS-201ENST00000380805 WWC3Q9ULE0 1092 aa22.78■■□□□ 1.24
GMDS-201ENST00000380805 XRCC6P12956 609 aaKnown RBP eCLIP22.77■■□□□ 1.244e-6■■■□□ 17
GMDS-201ENST00000380805 ARHGEF1Q92888 912 aaKnown RBP22.77■■□□□ 1.24
GMDS-201ENST00000380805 TNRC6CQ9HCJ0 1690 aaKnown RBP22.77■■□□□ 1.24
GMDS-201ENST00000380805 SNAP23O00161 211 aa22.77■■□□□ 1.23
GMDS-201ENST00000380805 ZBTB22O15209 634 aa22.77■■□□□ 1.23
GMDS-201ENST00000380805 ALX1Q15699 326 aa22.77■■□□□ 1.23
GMDS-201ENST00000380805 AMIGO3Q86WK7 504 aa22.77■■□□□ 1.23
GMDS-201ENST00000380805 SMARCC2Q8TAQ2 1214 aa22.77■■□□□ 1.23
GMDS-201ENST00000380805 CHD4Q14839 1912 aa22.76■■□□□ 1.23
GMDS-201ENST00000380805 MAP3K12Q12852 859 aa22.76■■□□□ 1.23
GMDS-201ENST00000380805 GAS2L3Q86XJ1 694 aa22.76■■□□□ 1.23
GMDS-201ENST00000380805 MB21D2Q8IYB1 491 aaPredicted RBP22.76■■□□□ 1.23
GMDS-201ENST00000380805 ZNF274Q96GC6 653 aaPredicted RBP22.76■■□□□ 1.23
GMDS-201ENST00000380805 ADRA2BP18089 450 aa22.75■■□□□ 1.23
GMDS-201ENST00000380805 LARP1BQ659C4 914 aaKnown RBP22.75■■□□□ 1.23
GMDS-201ENST00000380805 CAVIN1Q6NZI2 390 aaKnown RBP22.75■■□□□ 1.23
GMDS-201ENST00000380805 STRBPQ96SI9 672 aaKnown RBP22.75■■□□□ 1.23
GMDS-201ENST00000380805 GRPEL1Q9HAV7 217 aa22.75■■□□□ 1.23
GMDS-201ENST00000380805 BCAMP50895 628 aa22.74■■□□□ 1.23
GMDS-201ENST00000380805 SCRN1Q12765 414 aa22.74■■□□□ 1.23
GMDS-201ENST00000380805 ZSCAN23Q3MJ62 389 aa22.74■■□□□ 1.23
GMDS-201ENST00000380805 TPTE2Q6XPS3 522 aa22.74■■□□□ 1.23
GMDS-201ENST00000380805 SMIM5Q71RC9 77 aa22.74■■□□□ 1.23
GMDS-201ENST00000380805 CHMP4CQ96CF2 233 aa22.74■■□□□ 1.23
GMDS-201ENST00000380805 MYH13Q9UKX3 1938 aa22.74■■□□□ 1.23
GMDS-201ENST00000380805 BICDL1Q6ZP65 573 aa22.74■■□□□ 1.23
GMDS-201ENST00000380805 NBPF5PQ86XG9 351 aaPredicted RBP22.74■■□□□ 1.23
GMDS-201ENST00000380805 NLRP3Q96P20 1036 aa22.74■■□□□ 1.23
GMDS-201ENST00000380805 MINPP1Q9UNW1 487 aa22.74■■□□□ 1.23
GMDS-201ENST00000380805 ZNF213O14771 459 aa22.73■■□□□ 1.23
GMDS-201ENST00000380805 GTF2E1P29083 439 aaPredicted RBP22.73■■□□□ 1.23
GMDS-201ENST00000380805 STK3Q13188 491 aa22.73■■□□□ 1.23
GMDS-201ENST00000380805 USP48Q86UV5 1035 aa22.73■■□□□ 1.23
GMDS-201ENST00000380805 NCOA7Q8NI08 942 aa22.73■■□□□ 1.23
GMDS-201ENST00000380805 LRRC2Q9BYS8 371 aa22.73■■□□□ 1.23
GMDS-201ENST00000380805 PNPLA7Q6ZV29 1317 aa22.72■■□□□ 1.23
GMDS-201ENST00000380805 CACNA1SQ13698 1873 aa22.72■■□□□ 1.23
GMDS-201ENST00000380805 FGD1P98174 961 aa22.72■■□□□ 1.23
GMDS-201ENST00000380805 ZNF827Q17R98 1081 aa22.72■■□□□ 1.23
GMDS-201ENST00000380805 CELF1Q92879 486 aaKnown RBP22.72■■□□□ 1.23
GMDS-201ENST00000380805 NBPF3Q9H094 633 aa22.72■■□□□ 1.23
GMDS-201ENST00000380805 ANO8Q9HCE9 1232 aaPredicted RBP22.72■■□□□ 1.23
GMDS-201ENST00000380805 NSFL1CQ9UNZ2 370 aaKnown RBP22.72■■□□□ 1.23
GMDS-201ENST00000380805 CARMIL3Q8ND23 1372 aa22.72■■□□□ 1.23
GMDS-201ENST00000380805 MYH15Q9Y2K3 1946 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms