RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 SIRT1Q96EB6 747 aa18.19■□□□□ 0.5
COL2A1-202ENST00000380518 OPA1O60313 960 aa18.18■□□□□ 0.5
COL2A1-202ENST00000380518 MAGEB6Q8N7X4 407 aa18.18■□□□□ 0.5
COL2A1-202ENST00000380518 IFNKQ9P0W0 207 aa18.18■□□□□ 0.5
COL2A1-202ENST00000380518 HDAC9Q9UKV0 1011 aa18.18■□□□□ 0.5
COL2A1-202ENST00000380518 TPTE2Q6XPS3 522 aa18.18■□□□□ 0.5
COL2A1-202ENST00000380518 F8W031 263 aaPredicted RBP18.18■□□□□ 0.5
COL2A1-202ENST00000380518 PICALMQ13492 652 aa18.18■□□□□ 0.5
COL2A1-202ENST00000380518 CCDC77Q9BR77 488 aa18.18■□□□□ 0.5
COL2A1-202ENST00000380518 HELLSQ9NRZ9 838 aa18.18■□□□□ 0.5
COL2A1-202ENST00000380518 DDB1Q16531 1140 aa18.18■□□□□ 0.5
COL2A1-202ENST00000380518 OGFOD1Q8N543 542 aa18.18■□□□□ 0.5
COL2A1-202ENST00000380518 ACSBG1Q96GR2 724 aa18.18■□□□□ 0.5
COL2A1-202ENST00000380518 SYNCQ9H7C4 482 aa18.18■□□□□ 0.5
COL2A1-202ENST00000380518 EIF2AK4Q9P2K8 1649 aaKnown RBP18.18■□□□□ 0.5
COL2A1-202ENST00000380518 PHACTR2O75167 634 aa18.17■□□□□ 0.5
COL2A1-202ENST00000380518 STX17P56962 302 aa18.17■□□□□ 0.5
COL2A1-202ENST00000380518 MIGA1Q8NAN2 632 aa18.17■□□□□ 0.5
COL2A1-202ENST00000380518 BICC1Q9H694 974 aaKnown RBP18.17■□□□□ 0.5
COL2A1-202ENST00000380518 SPDYE3A6NKU9 549 aa18.17■□□□□ 0.5
COL2A1-202ENST00000380518 SEC24BO95487 1268 aa18.17■□□□□ 0.5
COL2A1-202ENST00000380518 DTHD1Q6ZMT9 781 aa18.17■□□□□ 0.5
COL2A1-202ENST00000380518 HELBQ8NG08 1087 aaPredicted RBP18.17■□□□□ 0.5
COL2A1-202ENST00000380518 A0A1W2PP64 1363 aa18.17■□□□□ 0.5
COL2A1-202ENST00000380518 TNNI2P48788 182 aa18.17■□□□□ 0.5
COL2A1-202ENST00000380518 C6orf163Q5TEZ5 329 aa18.17■□□□□ 0.5
COL2A1-202ENST00000380518 HS2ST1Q7LGA3 356 aa18.17■□□□□ 0.5
COL2A1-202ENST00000380518 RAPGEF6Q8TEU7 1601 aa18.17■□□□□ 0.5
COL2A1-202ENST00000380518 BIVM-ERCC5R4GMW8 1640 aa18.17■□□□□ 0.5
COL2A1-202ENST00000380518 A0A1W2PRG0 241 aa18.17■□□□□ 0.5
COL2A1-202ENST00000380518 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
COL2A1-202ENST00000380518 PER1O15534 1290 aaPredicted RBP18.16■□□□□ 0.5
COL2A1-202ENST00000380518 IVLP07476 585 aa18.16■□□□□ 0.5
COL2A1-202ENST00000380518 UBXN1Q04323 297 aa18.16■□□□□ 0.5
COL2A1-202ENST00000380518 SYCP2Q9BX26 1530 aa18.16■□□□□ 0.5
COL2A1-202ENST00000380518 GCP02774 474 aa18.16■□□□□ 0.5
COL2A1-202ENST00000380518 NEK11Q8NG66 645 aa18.16■□□□□ 0.5
COL2A1-202ENST00000380518 PPP1R14CQ8TAE6 165 aa18.16■□□□□ 0.5
COL2A1-202ENST00000380518 TSNARE1Q96NA8 513 aa18.16■□□□□ 0.5
COL2A1-202ENST00000380518 LUC7L2Q9Y383 392 aaKnown RBP18.16■□□□□ 0.5
COL2A1-202ENST00000380518 ZNF518AQ6AHZ1 1483 aa18.16■□□□□ 0.5
COL2A1-202ENST00000380518 TUBBP07437 444 aa18.16■□□□□ 0.5
COL2A1-202ENST00000380518 RNMTO43148 476 aaKnown RBP18.16■□□□□ 0.5
COL2A1-202ENST00000380518 MYL5Q02045 173 aa18.16■□□□□ 0.5
COL2A1-202ENST00000380518 IMPG2Q9BZV3 1241 aa18.16■□□□□ 0.5
COL2A1-202ENST00000380518 COMMD10Q9Y6G5 202 aa18.16■□□□□ 0.5
COL2A1-202ENST00000380518 FAM160A1Q05DH4 1040 aa18.15■□□□□ 0.5
COL2A1-202ENST00000380518 NSRP1Q9H0G5 558 aaKnown RBP18.15■□□□□ 0.5
COL2A1-202ENST00000380518 MCM7P33993 719 aa18.15■□□□□ 0.5
COL2A1-202ENST00000380518 TIGD1Q96MW7 591 aa18.15■□□□□ 0.5
COL2A1-202ENST00000380518 ZC3H12CQ9C0D7 883 aaKnown RBP18.15■□□□□ 0.5
COL2A1-202ENST00000380518 BABAM1Q9NWV8 329 aa18.15■□□□□ 0.5
COL2A1-202ENST00000380518 MRVI1Q9Y6F6 885 aa18.15■□□□□ 0.5
COL2A1-202ENST00000380518 MAP3K19Q56UN5 1328 aa18.15■□□□□ 0.5
COL2A1-202ENST00000380518 ARID5AQ03989 594 aa18.15■□□□□ 0.5
COL2A1-202ENST00000380518 ABCC1P33527 1531 aa18.15■□□□□ 0.5
COL2A1-202ENST00000380518 HSPA4P34932 840 aa18.15■□□□□ 0.5
COL2A1-202ENST00000380518 CNGA4Q8IV77 575 aa18.15■□□□□ 0.5
COL2A1-202ENST00000380518 RBM28Q9NW13 759 aaKnown RBP18.15■□□□□ 0.5
COL2A1-202ENST00000380518 ZHX1Q9UKY1 873 aaPredicted RBP18.15■□□□□ 0.5
COL2A1-202ENST00000380518 ELP1O95163 1332 aa18.15■□□□□ 0.5
COL2A1-202ENST00000380518 MYCNP04198 464 aaPredicted RBP18.14■□□□□ 0.5
COL2A1-202ENST00000380518 ANKRD2Q9GZV1 360 aa18.14■□□□□ 0.5
COL2A1-202ENST00000380518 GUCA1BQ9UMX6 200 aa18.14■□□□□ 0.5
COL2A1-202ENST00000380518 NUP153P49790 1475 aaKnown RBP18.14■□□□□ 0.49
COL2A1-202ENST00000380518 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.14■□□□□ 0.493e-6■■■■□ 22.9
COL2A1-202ENST00000380518 V9GYY5 206 aaPredicted RBP18.14■□□□□ 0.49
COL2A1-202ENST00000380518 IP6K1Q92551 441 aa18.14■□□□□ 0.49
COL2A1-202ENST00000380518 STMN4Q9H169 189 aaPredicted RBP18.14■□□□□ 0.49
COL2A1-202ENST00000380518 ITSN2Q9NZM3 1697 aa18.14■□□□□ 0.49
COL2A1-202ENST00000380518 HOXC9P31274 260 aa18.14■□□□□ 0.49
COL2A1-202ENST00000380518 ATRIPQ8WXE1 791 aa18.14■□□□□ 0.49
COL2A1-202ENST00000380518 IQCGQ9H095 443 aaKnown RBP18.14■□□□□ 0.49
COL2A1-202ENST00000380518 LZTFL1Q9NQ48 299 aa18.14■□□□□ 0.49
COL2A1-202ENST00000380518 RILPL1Q5EBL4 403 aa18.13■□□□□ 0.49
COL2A1-202ENST00000380518 TICAM2Q86XR7 235 aa18.13■□□□□ 0.49
COL2A1-202ENST00000380518 FBF1Q8TES7 1133 aa18.13■□□□□ 0.49
COL2A1-202ENST00000380518 FAM13AO94988 1023 aa18.13■□□□□ 0.49
COL2A1-202ENST00000380518 RPS6KB1P23443 525 aa18.13■□□□□ 0.49
COL2A1-202ENST00000380518 KARSQ15046 597 aaKnown RBP18.13■□□□□ 0.49
COL2A1-202ENST00000380518 NSFL1CQ9UNZ2 370 aaKnown RBP18.13■□□□□ 0.49
COL2A1-202ENST00000380518 ATP2A1O14983 1001 aa18.13■□□□□ 0.49
COL2A1-202ENST00000380518 RXRAP19793 462 aa18.13■□□□□ 0.49
COL2A1-202ENST00000380518 LDHBP07195 334 aaKnown RBP18.13■□□□□ 0.49
COL2A1-202ENST00000380518 HOXB7P09629 217 aa18.13■□□□□ 0.49
COL2A1-202ENST00000380518 ZNF569Q5MCW4 686 aa18.13■□□□□ 0.49
COL2A1-202ENST00000380518 TCHPQ9BT92 498 aa18.13■□□□□ 0.49
COL2A1-202ENST00000380518 EYA2O00167 538 aa18.12■□□□□ 0.49
COL2A1-202ENST00000380518 A0A1B0GVL5 298 aa18.12■□□□□ 0.49
COL2A1-202ENST00000380518 SYT10Q6XYQ8 523 aa18.12■□□□□ 0.49
COL2A1-202ENST00000380518 ASXL2Q76L83 1435 aa18.12■□□□□ 0.49
COL2A1-202ENST00000380518 MBD4O95243 580 aa18.12■□□□□ 0.49
COL2A1-202ENST00000380518 CPA1P15085 419 aa18.12■□□□□ 0.49
COL2A1-202ENST00000380518 G2E3Q7L622 706 aa18.12■□□□□ 0.49
COL2A1-202ENST00000380518 CEP63Q96MT8 703 aa18.12■□□□□ 0.49
COL2A1-202ENST00000380518 C19orf44Q9H6X5 657 aa18.12■□□□□ 0.49
COL2A1-202ENST00000380518 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.12■□□□□ 0.49
COL2A1-202ENST00000380518 ARHGEF12Q9NZN5 1544 aa18.12■□□□□ 0.49
COL2A1-202ENST00000380518 AOX1Q06278 1338 aa18.12■□□□□ 0.49
COL2A1-202ENST00000380518 PPP1R2P41236 205 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms