RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 ARHGAP31Q2M1Z3 1444 aa13.12□□□□□ -0.31
SMAD9-202ENST00000379826 KARSQ15046 597 aaKnown RBP13.12□□□□□ -0.31
SMAD9-202ENST00000379826 NECTIN1Q15223 517 aa13.12□□□□□ -0.31
SMAD9-202ENST00000379826 NOC3LQ8WTT2 800 aaKnown RBP13.12□□□□□ -0.31
SMAD9-202ENST00000379826 CCDC12Q8WUD4 166 aaPredicted RBP13.12□□□□□ -0.31
SMAD9-202ENST00000379826 IPO7O95373 1038 aaKnown RBP13.11□□□□□ -0.31
SMAD9-202ENST00000379826 ERO1AQ96HE7 468 aa13.11□□□□□ -0.31
SMAD9-202ENST00000379826 IFIT3O14879 490 aaKnown RBP13.11□□□□□ -0.31
SMAD9-202ENST00000379826 GIGYF1O75420 1035 aaPredicted RBP13.11□□□□□ -0.31
SMAD9-202ENST00000379826 NAP1L1P55209 391 aaKnown RBP13.11□□□□□ -0.31
SMAD9-202ENST00000379826 GCKRQ14397 625 aa13.11□□□□□ -0.31
SMAD9-202ENST00000379826 SLFNL1Q499Z3 407 aa13.11□□□□□ -0.31
SMAD9-202ENST00000379826 TMEM67Q5HYA8 995 aa13.11□□□□□ -0.31
SMAD9-202ENST00000379826 XPO4Q9C0E2 1151 aaKnown RBP13.11□□□□□ -0.31
SMAD9-202ENST00000379826 IFNL2Q8IZJ0 200 aa13.11□□□□□ -0.31
SMAD9-202ENST00000379826 METTL22Q9BUU2 404 aaPredicted RBP13.11□□□□□ -0.31
SMAD9-202ENST00000379826 IARSP41252 1262 aaKnown RBP13.1□□□□□ -0.31
SMAD9-202ENST00000379826 SLAIN2Q9P270 581 aa13.1□□□□□ -0.31
SMAD9-202ENST00000379826 ADCY9O60503 1353 aa13.1□□□□□ -0.31
SMAD9-202ENST00000379826 NEURL1BA8MQ27 555 aa13.1□□□□□ -0.31
SMAD9-202ENST00000379826 TSPOAP1O95153 1857 aa13.1□□□□□ -0.31
SMAD9-202ENST00000379826 RFC4P35249 363 aa13.1□□□□□ -0.31
SMAD9-202ENST00000379826 TOB2Q14106 344 aaPredicted RBP13.1□□□□□ -0.31
SMAD9-202ENST00000379826 CCDC70Q6NSX1 233 aa13.1□□□□□ -0.31
SMAD9-202ENST00000379826 E7EWF7 191 aa13.1□□□□□ -0.31
SMAD9-202ENST00000379826 TAF5LO75529 589 aa13.1□□□□□ -0.31
SMAD9-202ENST00000379826 GOLGA8FQ08AF8 430 aa13.1□□□□□ -0.31
SMAD9-202ENST00000379826 GOLGA8DPQ0D2H9 430 aa13.1□□□□□ -0.31
SMAD9-202ENST00000379826 IFIT5Q13325 482 aaKnown RBP13.1□□□□□ -0.31
SMAD9-202ENST00000379826 CCDC102BQ68D86 513 aa13.1□□□□□ -0.31
SMAD9-202ENST00000379826 TDRD7Q8NHU6 1098 aaKnown RBP13.1□□□□□ -0.31
SMAD9-202ENST00000379826 ACSBG1Q96GR2 724 aa13.1□□□□□ -0.31
SMAD9-202ENST00000379826 HOXB7P09629 217 aa13.1□□□□□ -0.31
SMAD9-202ENST00000379826 ZNF790Q6PG37 636 aa13.1□□□□□ -0.31
SMAD9-202ENST00000379826 SASH1O94885 1247 aa13.1□□□□□ -0.31
SMAD9-202ENST00000379826 GCP02774 474 aa13.1□□□□□ -0.31
SMAD9-202ENST00000379826 KIF4BQ2VIQ3 1234 aa13.1□□□□□ -0.31
SMAD9-202ENST00000379826 ACBD3Q9H3P7 528 aa13.1□□□□□ -0.31
SMAD9-202ENST00000379826 AFMP43652 599 aa13.09□□□□□ -0.31
SMAD9-202ENST00000379826 NAPBQ9H115 298 aa13.09□□□□□ -0.31
SMAD9-202ENST00000379826 CALCOCO1Q9P1Z2 691 aa13.09□□□□□ -0.31
SMAD9-202ENST00000379826 CCDC144BQ3MJ40 725 aa13.09□□□□□ -0.31
SMAD9-202ENST00000379826 CABLES1Q8TDN4 633 aa13.09□□□□□ -0.31
SMAD9-202ENST00000379826 HELLSQ9NRZ9 838 aa13.09□□□□□ -0.31
SMAD9-202ENST00000379826 CLIC4Q9Y696 253 aa13.09□□□□□ -0.31
SMAD9-202ENST00000379826 USP27XA6NNY8 438 aa13.09□□□□□ -0.31
SMAD9-202ENST00000379826 MINDY4BA8MYZ0 360 aa13.09□□□□□ -0.31
SMAD9-202ENST00000379826 KIF5CO60282 957 aa13.09□□□□□ -0.31
SMAD9-202ENST00000379826 LMAN1P49257 510 aa13.09□□□□□ -0.31
SMAD9-202ENST00000379826 PGBD1Q96JS3 809 aa13.09□□□□□ -0.31
SMAD9-202ENST00000379826 UBAC1Q9BSL1 405 aa13.09□□□□□ -0.31
SMAD9-202ENST00000379826 FANCCQ00597 558 aa13.09□□□□□ -0.31
SMAD9-202ENST00000379826 TIGD1Q96MW7 591 aa13.09□□□□□ -0.31
SMAD9-202ENST00000379826 ELP1O95163 1332 aa13.09□□□□□ -0.31
SMAD9-202ENST00000379826 NDUFA8P51970 172 aa13.08□□□□□ -0.31
SMAD9-202ENST00000379826 NCBP1Q09161 790 aaKnown RBP13.08□□□□□ -0.31
SMAD9-202ENST00000379826 SIRT1Q96EB6 747 aa13.08□□□□□ -0.31
SMAD9-202ENST00000379826 SPTLC3Q9NUV7 552 aa13.08□□□□□ -0.31
SMAD9-202ENST00000379826 ZNF202O95125 648 aa13.08□□□□□ -0.32
SMAD9-202ENST00000379826 ERCC6LQ2NKX8 1250 aa13.08□□□□□ -0.32
SMAD9-202ENST00000379826 ZNF710Q8N1W2 664 aa13.08□□□□□ -0.32
SMAD9-202ENST00000379826 LLPHQ9BRT6 129 aaKnown RBP13.08□□□□□ -0.32
SMAD9-202ENST00000379826 CDC42BPGQ6DT37 1551 aa13.08□□□□□ -0.32
SMAD9-202ENST00000379826 PNOCQ13519 176 aa13.08□□□□□ -0.32
SMAD9-202ENST00000379826 NACAP1Q9BZK3 213 aa13.08□□□□□ -0.32
SMAD9-202ENST00000379826 LZTFL1Q9NQ48 299 aa13.08□□□□□ -0.32
SMAD9-202ENST00000379826 DBNLQ9UJU6 430 aaKnown RBP13.08□□□□□ -0.32
SMAD9-202ENST00000379826 ERLIN1O75477 346 aa13.08□□□□□ -0.32
SMAD9-202ENST00000379826 NOM1Q5C9Z4 860 aaKnown RBP13.08□□□□□ -0.32
SMAD9-202ENST00000379826 WASF1Q92558 559 aa13.08□□□□□ -0.32
SMAD9-202ENST00000379826 PCDHA7Q9UN72 937 aa13.08□□□□□ -0.32
SMAD9-202ENST00000379826 IFT172Q9UG01 1749 aa13.08□□□□□ -0.32
SMAD9-202ENST00000379826 AP5Z1O43299 807 aa13.07□□□□□ -0.32
SMAD9-202ENST00000379826 CYP21A2P08686 494 aa13.07□□□□□ -0.32
SMAD9-202ENST00000379826 ZNF526Q8TF50 670 aaPredicted RBP13.07□□□□□ -0.32
SMAD9-202ENST00000379826 PUF60Q9UHX1 559 aaKnown RBP13.07□□□□□ -0.32
SMAD9-202ENST00000379826 FRMPD1Q5SYB0 1578 aa13.07□□□□□ -0.32
SMAD9-202ENST00000379826 NUP88Q99567 741 aaPredicted RBP13.07□□□□□ -0.32
SMAD9-202ENST00000379826 RNF216Q9NWF9 866 aaPredicted RBP13.07□□□□□ -0.32
SMAD9-202ENST00000379826 DIP2CQ9Y2E4 1556 aa13.07□□□□□ -0.32
SMAD9-202ENST00000379826 A0A1B0GUL7 405 aa13.07□□□□□ -0.32
SMAD9-202ENST00000379826 MARCH6O60337 910 aa13.07□□□□□ -0.32
SMAD9-202ENST00000379826 ATP5JP18859 108 aa13.07□□□□□ -0.32
SMAD9-202ENST00000379826 IL15P40933 162 aaPredicted RBP13.07□□□□□ -0.32
SMAD9-202ENST00000379826 FAM98CQ17RN3 349 aaKnown RBP13.07□□□□□ -0.32
SMAD9-202ENST00000379826 NAA16Q6N069 864 aaPredicted RBP13.07□□□□□ -0.32
SMAD9-202ENST00000379826 GOLPH3LQ9H4A5 285 aa13.07□□□□□ -0.32
SMAD9-202ENST00000379826 PFKFB2O60825 505 aa13.07□□□□□ -0.32
SMAD9-202ENST00000379826 RESTQ13127 1097 aa13.07□□□□□ -0.32
SMAD9-202ENST00000379826 CNKSR2Q8WXI2 1034 aa13.07□□□□□ -0.32
SMAD9-202ENST00000379826 MYL10Q9BUA6 226 aa13.07□□□□□ -0.32
SMAD9-202ENST00000379826 STX17P56962 302 aa13.07□□□□□ -0.32
SMAD9-202ENST00000379826 ANO1Q5XXA6 986 aa13.07□□□□□ -0.32
SMAD9-202ENST00000379826 KBTBD3Q8NAB2 608 aa13.07□□□□□ -0.32
SMAD9-202ENST00000379826 CARD6Q9BX69 1037 aa13.07□□□□□ -0.32
SMAD9-202ENST00000379826 KIF20AO95235 890 aa13.06□□□□□ -0.32
SMAD9-202ENST00000379826 CHGBP05060 677 aa13.06□□□□□ -0.32
SMAD9-202ENST00000379826 NLRP12P59046 1061 aa13.06□□□□□ -0.32
SMAD9-202ENST00000379826 AXDND1Q5T1B0 1012 aaPredicted RBP13.06□□□□□ -0.32
SMAD9-202ENST00000379826 PHKBQ93100 1093 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms