RNA–Protein interactions for RNA: ENST00000379521.8

NFX1-202, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best)

Gene NFX1, Length 3,609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-202ENST00000379521 SARM1Q6SZW1 724 aa8.12□□□□□ -1.11
NFX1-202ENST00000379521 GREM2Q9H772 168 aa8.12□□□□□ -1.11
NFX1-202ENST00000379521 PAPPA2Q9BXP8 1791 aa8.12□□□□□ -1.11
NFX1-202ENST00000379521 CDC25BP30305 580 aa8.12□□□□□ -1.11
NFX1-202ENST00000379521 STRBPQ96SI9 672 aaKnown RBP8.12□□□□□ -1.11
NFX1-202ENST00000379521 HPSEQ9Y251 543 aa8.12□□□□□ -1.11
NFX1-202ENST00000379521 CNPY2Q9Y2B0 182 aa8.12□□□□□ -1.11
NFX1-202ENST00000379521 ADAMTSL1Q8N6G6 1762 aa8.12□□□□□ -1.11
NFX1-202ENST00000379521 A0A1W2PQ27 194 aa8.11□□□□□ -1.11
NFX1-202ENST00000379521 A0A1W2PQ64 194 aa8.11□□□□□ -1.11
NFX1-202ENST00000379521 A0A1W2PQD8 194 aa8.11□□□□□ -1.11
NFX1-202ENST00000379521 U2AF2P26368 475 aaKnown RBP eCLIP8.11□□□□□ -1.114e-6■■□□□ 12.5
NFX1-202ENST00000379521 FUT2Q10981 343 aa8.11□□□□□ -1.11
NFX1-202ENST00000379521 MAP3K14Q99558 947 aa8.11□□□□□ -1.11
NFX1-202ENST00000379521 PUS7LQ9H0K6 701 aaKnown RBP8.11□□□□□ -1.11
NFX1-202ENST00000379521 MYH8P13535 1937 aa8.11□□□□□ -1.11
NFX1-202ENST00000379521 ZKSCAN1P17029 563 aaPredicted RBP8.11□□□□□ -1.11
NFX1-202ENST00000379521 PDCP20941 246 aa8.11□□□□□ -1.11
NFX1-202ENST00000379521 LIFRP42702 1097 aa8.11□□□□□ -1.11
NFX1-202ENST00000379521 PIP4K2AP48426 406 aaPredicted RBP8.11□□□□□ -1.11
NFX1-202ENST00000379521 SUSD4Q5VX71 490 aa8.11□□□□□ -1.11
NFX1-202ENST00000379521 BLOC1S2Q6QNY1 142 aa8.11□□□□□ -1.11
NFX1-202ENST00000379521 PLA2G4DQ86XP0 818 aa8.11□□□□□ -1.11
NFX1-202ENST00000379521 PIH1D3Q9NQM4 214 aaKnown RBP8.11□□□□□ -1.11
NFX1-202ENST00000379521 RTEL1Q9NZ71 1219 aa8.11□□□□□ -1.11
NFX1-202ENST00000379521 GOLGA6L22H0YM25 854 aa8.11□□□□□ -1.11
NFX1-202ENST00000379521 GTF2F1P35269 517 aaKnown RBP eCLIP8.11□□□□□ -1.11
NFX1-202ENST00000379521 TIMM10P62072 90 aa8.11□□□□□ -1.11
NFX1-202ENST00000379521 LEO1Q8WVC0 666 aaPredicted RBP8.11□□□□□ -1.11
NFX1-202ENST00000379521 LPIN2Q92539 896 aa8.11□□□□□ -1.11
NFX1-202ENST00000379521 ZNF594Q96JF6 807 aaPredicted RBP8.11□□□□□ -1.11
NFX1-202ENST00000379521 EPB41L4AQ9HCS5 686 aaPredicted RBP8.11□□□□□ -1.11
NFX1-202ENST00000379521 DDX49Q9Y6V7 483 aaKnown RBP8.11□□□□□ -1.11
NFX1-202ENST00000379521 CERKQ8TCT0 537 aa8.1□□□□□ -1.11
NFX1-202ENST00000379521 STAG1Q8WVM7 1258 aa8.1□□□□□ -1.11
NFX1-202ENST00000379521 ANKS1AQ92625 1134 aa8.1□□□□□ -1.11
NFX1-202ENST00000379521 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.1□□□□□ -1.11
NFX1-202ENST00000379521 CCDC87Q9NVE4 849 aa8.1□□□□□ -1.11
NFX1-202ENST00000379521 RBM27Q9P2N5 1060 aaKnown RBP8.1□□□□□ -1.11
NFX1-202ENST00000379521 ATP6V1DQ9Y5K8 247 aa8.1□□□□□ -1.11
NFX1-202ENST00000379521 SPATA31A6Q5VVP1 1343 aa8.1□□□□□ -1.11
NFX1-202ENST00000379521 PARP14Q460N5 1801 aa8.1□□□□□ -1.11
NFX1-202ENST00000379521 SH2B2O14492 632 aaPredicted RBP8.1□□□□□ -1.11
NFX1-202ENST00000379521 FGAP02671 866 aa8.1□□□□□ -1.11
NFX1-202ENST00000379521 HCLS1P14317 486 aaPredicted RBP8.1□□□□□ -1.11
NFX1-202ENST00000379521 ITGA6P23229 1130 aa8.1□□□□□ -1.11
NFX1-202ENST00000379521 IQCB1Q15051 598 aa8.1□□□□□ -1.11
NFX1-202ENST00000379521 TTF1Q15361 905 aaPredicted RBP8.1□□□□□ -1.11
NFX1-202ENST00000379521 GIMAP6Q6P9H5 292 aa8.1□□□□□ -1.11
NFX1-202ENST00000379521 SHISA4Q96DD7 197 aa8.1□□□□□ -1.11
NFX1-202ENST00000379521 RIOK1Q9BRS2 568 aaKnown RBP8.1□□□□□ -1.11
NFX1-202ENST00000379521 FSD1Q9BTV5 496 aa8.1□□□□□ -1.11
NFX1-202ENST00000379521 CLSTN2Q9H4D0 955 aa8.1□□□□□ -1.11
NFX1-202ENST00000379521 POLR3EQ9NVU0 708 aa8.1□□□□□ -1.11
NFX1-202ENST00000379521 PTPAQ15257 358 aa8.1□□□□□ -1.11
NFX1-202ENST00000379521 PUM3Q15397 648 aaKnown RBP8.1□□□□□ -1.11
NFX1-202ENST00000379521 CCDC129Q6ZRS4 1044 aa8.1□□□□□ -1.11
NFX1-202ENST00000379521 KIAA1211Q6ZU35 1233 aa8.1□□□□□ -1.11
NFX1-202ENST00000379521 Q6ZUG5 572 aa8.1□□□□□ -1.11
NFX1-202ENST00000379521 FBXO33Q7Z6M2 555 aa8.1□□□□□ -1.11
NFX1-202ENST00000379521 TDRD7Q8NHU6 1098 aaKnown RBP8.1□□□□□ -1.11
NFX1-202ENST00000379521 OFD1O75665 1012 aa8.09□□□□□ -1.11
NFX1-202ENST00000379521 CRKLP46109 303 aaKnown RBP8.09□□□□□ -1.11
NFX1-202ENST00000379521 SEC23AQ15436 765 aa8.09□□□□□ -1.11
NFX1-202ENST00000379521 AXDND1Q5T1B0 1012 aaPredicted RBP8.09□□□□□ -1.11
NFX1-202ENST00000379521 NT5DC1Q5TFE4 455 aa8.09□□□□□ -1.11
NFX1-202ENST00000379521 SYNE4Q8N205 404 aa8.09□□□□□ -1.11
NFX1-202ENST00000379521 SPATA20Q8TB22 786 aa8.09□□□□□ -1.11
NFX1-202ENST00000379521 MRVI1Q9Y6F6 885 aa8.09□□□□□ -1.11
NFX1-202ENST00000379521 ESPNB1AK53 854 aa8.09□□□□□ -1.11
NFX1-202ENST00000379521 CAVIN2O95810 425 aa8.09□□□□□ -1.11
NFX1-202ENST00000379521 SLC5A1P13866 664 aa8.09□□□□□ -1.11
NFX1-202ENST00000379521 CAVIN1Q6NZI2 390 aaKnown RBP8.09□□□□□ -1.11
NFX1-202ENST00000379521 LINC00116Q8NCU8 138 aa8.09□□□□□ -1.11
NFX1-202ENST00000379521 TNFRSF25Q93038 417 aa8.09□□□□□ -1.11
NFX1-202ENST00000379521 SCAND2PQ9GZW5 306 aaPredicted RBP8.09□□□□□ -1.11
NFX1-202ENST00000379521 HSD3B7Q9H2F3 369 aa8.09□□□□□ -1.11
NFX1-202ENST00000379521 LY9Q9HBG7 655 aa8.09□□□□□ -1.11
NFX1-202ENST00000379521 SEMA3EO15041 775 aa8.09□□□□□ -1.11
NFX1-202ENST00000379521 UQCRFS1P1P0C7P4 283 aa8.09□□□□□ -1.11
NFX1-202ENST00000379521 HMGN5P82970 282 aaKnown RBP8.09□□□□□ -1.11
NFX1-202ENST00000379521 DNM1Q05193 864 aaKnown RBP8.09□□□□□ -1.11
NFX1-202ENST00000379521 CCDC102BQ68D86 513 aa8.09□□□□□ -1.11
NFX1-202ENST00000379521 ZSCAN30Q86W11 494 aa8.09□□□□□ -1.11
NFX1-202ENST00000379521 CCDC83Q8IWF9 413 aa8.09□□□□□ -1.11
NFX1-202ENST00000379521 FMR1NBQ8N0W7 255 aaPredicted RBP8.09□□□□□ -1.11
NFX1-202ENST00000379521 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.09□□□□□ -1.11
NFX1-202ENST00000379521 GSG1L2A8MUP6 293 aa8.08□□□□□ -1.12
NFX1-202ENST00000379521 ZAP70P43403 619 aa8.08□□□□□ -1.12
NFX1-202ENST00000379521 MDM2Q00987 491 aaPredicted RBP8.08□□□□□ -1.12
NFX1-202ENST00000379521 SLFNL1Q499Z3 407 aa8.08□□□□□ -1.12
NFX1-202ENST00000379521 TBC1D10CQ8IV04 446 aa8.08□□□□□ -1.12
NFX1-202ENST00000379521 SIL1Q9H173 461 aa8.08□□□□□ -1.12
NFX1-202ENST00000379521 BSDC1Q9NW68 430 aaPredicted RBP8.08□□□□□ -1.12
NFX1-202ENST00000379521 LOC102724428A0A0B4J2F2 783 aa8.08□□□□□ -1.12
NFX1-202ENST00000379521 CSB-PGBD3P0DP91 1061 aa8.08□□□□□ -1.12
NFX1-202ENST00000379521 PCP11498 1178 aaKnown RBP8.08□□□□□ -1.12
NFX1-202ENST00000379521 SIK1P57059 783 aa8.08□□□□□ -1.12
NFX1-202ENST00000379521 CRY2Q49AN0 593 aa8.08□□□□□ -1.12
NFX1-202ENST00000379521 KIF6Q6ZMV9 814 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms