RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 LINC00301Q8NCQ3 95 aa9.49□□□□□ -0.89
PTPRR-203ENST00000378778 PCDHA7Q9UN72 937 aa9.49□□□□□ -0.89
PTPRR-203ENST00000378778 DDX60Q8IY21 1712 aaKnown RBP9.48□□□□□ -0.89
PTPRR-203ENST00000378778 ERICH4A6NGS2 130 aa9.48□□□□□ -0.89
PTPRR-203ENST00000378778 EIF3JO75822 258 aaKnown RBP9.48□□□□□ -0.89
PTPRR-203ENST00000378778 NCAPHQ15003 741 aa9.48□□□□□ -0.89
PTPRR-203ENST00000378778 VSTM4Q8IW00 320 aa9.48□□□□□ -0.89
PTPRR-203ENST00000378778 NECTIN2Q92692 538 aa9.48□□□□□ -0.89
PTPRR-203ENST00000378778 GOLGA1Q92805 767 aa9.48□□□□□ -0.89
PTPRR-203ENST00000378778 HAUS7Q99871 368 aa9.48□□□□□ -0.89
PTPRR-203ENST00000378778 GBP3Q9H0R5 595 aa9.48□□□□□ -0.89
PTPRR-203ENST00000378778 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.48□□□□□ -0.89
PTPRR-203ENST00000378778 MKRN1Q9UHC7 482 aaKnown RBP9.48□□□□□ -0.89
PTPRR-203ENST00000378778 MAP3K2Q9Y2U5 619 aa9.48□□□□□ -0.89
PTPRR-203ENST00000378778 PARP3Q9Y6F1 533 aa9.48□□□□□ -0.89
PTPRR-203ENST00000378778 CAMTA1Q9Y6Y1 1673 aa9.48□□□□□ -0.89
PTPRR-203ENST00000378778 TBC1D8O95759 1140 aa9.48□□□□□ -0.89
PTPRR-203ENST00000378778 CASQ1P31415 396 aa9.48□□□□□ -0.89
PTPRR-203ENST00000378778 MYL5Q02045 173 aa9.48□□□□□ -0.89
PTPRR-203ENST00000378778 STK3Q13188 491 aa9.48□□□□□ -0.89
PTPRR-203ENST00000378778 SMC1AQ14683 1233 aaKnown RBP9.48□□□□□ -0.89
PTPRR-203ENST00000378778 STK38Q15208 465 aa9.48□□□□□ -0.89
PTPRR-203ENST00000378778 REXO1L1PQ8IX06 675 aa9.48□□□□□ -0.89
PTPRR-203ENST00000378778 ACBD3Q9H3P7 528 aa9.48□□□□□ -0.89
PTPRR-203ENST00000378778 GPR108Q9NPR9 543 aa9.48□□□□□ -0.89
PTPRR-203ENST00000378778 CARMIL3Q8ND23 1372 aa9.47□□□□□ -0.89
PTPRR-203ENST00000378778 ERLIN1O75477 346 aa9.47□□□□□ -0.89
PTPRR-203ENST00000378778 USP5P45974 858 aa9.47□□□□□ -0.89
PTPRR-203ENST00000378778 TEFQ10587 303 aa9.47□□□□□ -0.89
PTPRR-203ENST00000378778 SF3A1Q15459 793 aaKnown RBP9.47□□□□□ -0.89
PTPRR-203ENST00000378778 PLEKHO1Q53GL0 409 aaPredicted RBP9.47□□□□□ -0.89
PTPRR-203ENST00000378778 HOOK1Q9UJC3 728 aaKnown RBP9.47□□□□□ -0.89
PTPRR-203ENST00000378778 MRFAP1Q9Y605 127 aa9.47□□□□□ -0.89
PTPRR-203ENST00000378778 MAP2K7O14733 419 aa9.47□□□□□ -0.89
PTPRR-203ENST00000378778 SPTLC2O15270 562 aa9.47□□□□□ -0.89
PTPRR-203ENST00000378778 PPP6R2O75170 966 aa9.47□□□□□ -0.89
PTPRR-203ENST00000378778 OAS2P29728 719 aaKnown RBP9.47□□□□□ -0.89
PTPRR-203ENST00000378778 TXLNAP40222 546 aa9.47□□□□□ -0.89
PTPRR-203ENST00000378778 ZSCAN26Q16670 478 aa9.47□□□□□ -0.89
PTPRR-203ENST00000378778 ZNF589Q86UQ0 364 aaPredicted RBP9.47□□□□□ -0.89
PTPRR-203ENST00000378778 CEP112Q8N8E3 955 aa9.47□□□□□ -0.89
PTPRR-203ENST00000378778 NAA15Q9BXJ9 866 aaKnown RBP9.47□□□□□ -0.89
PTPRR-203ENST00000378778 BOLA2Q9H3K6 86 aa9.47□□□□□ -0.89
PTPRR-203ENST00000378778 BRMS1Q9HCU9 246 aa9.47□□□□□ -0.89
PTPRR-203ENST00000378778 DDX21Q9NR30 783 aaKnown RBP eCLIP9.47□□□□□ -0.89
PTPRR-203ENST00000378778 DACH1Q9UI36 760 aa9.47□□□□□ -0.89
PTPRR-203ENST00000378778 URI1O94763 535 aaPredicted RBP9.46□□□□□ -0.89
PTPRR-203ENST00000378778 CTDNEP1O95476 244 aa9.46□□□□□ -0.89
PTPRR-203ENST00000378778 CYP21A2P08686 494 aa9.46□□□□□ -0.89
PTPRR-203ENST00000378778 EIF2S2P20042 333 aaKnown RBP9.46□□□□□ -0.89
PTPRR-203ENST00000378778 OLFM4Q6UX06 510 aa9.46□□□□□ -0.89
PTPRR-203ENST00000378778 KBTBD3Q8NAB2 608 aa9.46□□□□□ -0.89
PTPRR-203ENST00000378778 NGDNQ8NEJ9 315 aaKnown RBP9.46□□□□□ -0.89
PTPRR-203ENST00000378778 IP6K1Q92551 441 aa9.46□□□□□ -0.89
PTPRR-203ENST00000378778 ZNF609O15014 1411 aa9.46□□□□□ -0.89
PTPRR-203ENST00000378778 RGPD8O14715 1765 aaPredicted RBP9.46□□□□□ -0.9
PTPRR-203ENST00000378778 BTBD11A6QL63 1104 aa9.46□□□□□ -0.9
PTPRR-203ENST00000378778 ZNF202O95125 648 aa9.46□□□□□ -0.9
PTPRR-203ENST00000378778 TOP1P11387 765 aaKnown RBP9.46□□□□□ -0.9
PTPRR-203ENST00000378778 ACTN2P35609 894 aa9.46□□□□□ -0.9
PTPRR-203ENST00000378778 UBASH3AP57075 661 aa9.46□□□□□ -0.9
PTPRR-203ENST00000378778 NEXNQ0ZGT2 675 aa9.46□□□□□ -0.9
PTPRR-203ENST00000378778 TBX2Q13207 712 aaPredicted RBP9.46□□□□□ -0.9
PTPRR-203ENST00000378778 DPCR1Q3MIW9 517 aa9.46□□□□□ -0.9
PTPRR-203ENST00000378778 LEKR1Q6ZMV7 388 aa9.46□□□□□ -0.9
PTPRR-203ENST00000378778 ILDR2Q71H61 639 aa9.46□□□□□ -0.9
PTPRR-203ENST00000378778 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.46□□□□□ -0.9
PTPRR-203ENST00000378778 SUCLG2Q96I99 432 aa9.46□□□□□ -0.9
PTPRR-203ENST00000378778 FAM107BQ9H098 131 aa9.46□□□□□ -0.9
PTPRR-203ENST00000378778 RAB21Q9UL25 225 aa9.46□□□□□ -0.9
PTPRR-203ENST00000378778 PPP2R2CQ9Y2T4 447 aa9.46□□□□□ -0.9
PTPRR-203ENST00000378778 NEDD4P46934 1319 aa9.46□□□□□ -0.9
PTPRR-203ENST00000378778 NDUFA8P51970 172 aa9.45□□□□□ -0.9
PTPRR-203ENST00000378778 PPP2R3AQ06190 1150 aa9.45□□□□□ -0.9
PTPRR-203ENST00000378778 SYNE3Q6ZMZ3 975 aa9.45□□□□□ -0.9
PTPRR-203ENST00000378778 KRBA2Q6ZNG9 492 aa9.45□□□□□ -0.9
PTPRR-203ENST00000378778 HDXQ7Z353 690 aa9.45□□□□□ -0.9
PTPRR-203ENST00000378778 UTP14AQ9BVJ6 771 aaKnown RBP9.45□□□□□ -0.9
PTPRR-203ENST00000378778 CARD6Q9BX69 1037 aa9.45□□□□□ -0.9
PTPRR-203ENST00000378778 FUT8Q9BYC5 575 aa9.45□□□□□ -0.9
PTPRR-203ENST00000378778 CCDC8Q9H0W5 538 aaPredicted RBP9.45□□□□□ -0.9
PTPRR-203ENST00000378778 BICC1Q9H694 974 aaKnown RBP9.45□□□□□ -0.9
PTPRR-203ENST00000378778 PA2G4Q9UQ80 394 aaKnown RBP9.45□□□□□ -0.9
PTPRR-203ENST00000378778 TBX22Q9Y458 520 aa9.45□□□□□ -0.9
PTPRR-203ENST00000378778 NFAT5O94916 1531 aa9.45□□□□□ -0.9
PTPRR-203ENST00000378778 PDIA3P30101 505 aaKnown RBP9.45□□□□□ -0.9
PTPRR-203ENST00000378778 SF3B2Q13435 895 aaKnown RBP9.45□□□□□ -0.9
PTPRR-203ENST00000378778 TNNI3KQ59H18 835 aa9.45□□□□□ -0.9
PTPRR-203ENST00000378778 GORABQ5T7V8 394 aa9.45□□□□□ -0.9
PTPRR-203ENST00000378778 MSANTD4Q8NCY6 345 aa9.45□□□□□ -0.9
PTPRR-203ENST00000378778 FPGT-TNNI3KV9GXZ4 949 aa9.45□□□□□ -0.9
PTPRR-203ENST00000378778 ARHGAP23Q9P227 1491 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 VWA3AA6NCI4 1184 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 TNNT3P45378 269 aaPredicted RBP9.44□□□□□ -0.9
PTPRR-203ENST00000378778 NLRP6P59044 892 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 SLC39A14Q15043 492 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 RABL6Q3YEC7 729 aaPredicted RBP9.44□□□□□ -0.9
PTPRR-203ENST00000378778 MYSM1Q5VVJ2 828 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 ANO1Q5XXA6 986 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 PROM2Q8N271 834 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms