RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 GREM2Q9H772 168 aa18.01■□□□□ 0.47
RER1-203ENST00000378513 NDUFA8P51970 172 aa18■□□□□ 0.47
RER1-203ENST00000378513 ORC3Q9UBD5 711 aaPredicted RBP18■□□□□ 0.47
RER1-203ENST00000378513 PDCL2Q8N4E4 241 aa18■□□□□ 0.47
RER1-203ENST00000378513 RCOR1Q9UKL0 485 aa18■□□□□ 0.47
RER1-203ENST00000378513 PCDH11XQ9BZA7 1347 aa18■□□□□ 0.47
RER1-203ENST00000378513 PCDH11YQ9BZA8 1340 aa18■□□□□ 0.47
RER1-203ENST00000378513 KIF28PB7ZC32 967 aa17.99■□□□□ 0.47
RER1-203ENST00000378513 CPLX1O14810 134 aa17.99■□□□□ 0.47
RER1-203ENST00000378513 HMGB1P09429 215 aaKnown RBP17.99■□□□□ 0.47
RER1-203ENST00000378513 LDHAL6AQ6ZMR3 332 aa17.99■□□□□ 0.47
RER1-203ENST00000378513 BRINP3Q76B58 766 aa17.99■□□□□ 0.47
RER1-203ENST00000378513 CADPS2Q86UW7 1296 aa17.99■□□□□ 0.47
RER1-203ENST00000378513 PLA2G4DQ86XP0 818 aa17.99■□□□□ 0.47
RER1-203ENST00000378513 TDRD7Q8NHU6 1098 aaKnown RBP17.99■□□□□ 0.47
RER1-203ENST00000378513 ARFGEF2Q9Y6D5 1785 aa17.99■□□□□ 0.47
RER1-203ENST00000378513 GPAA1O43292 621 aa17.99■□□□□ 0.47
RER1-203ENST00000378513 ANTXR2P58335 489 aa17.99■□□□□ 0.47
RER1-203ENST00000378513 IFIT5Q13325 482 aaKnown RBP17.99■□□□□ 0.47
RER1-203ENST00000378513 IQCB1Q15051 598 aa17.99■□□□□ 0.47
RER1-203ENST00000378513 STK38Q15208 465 aa17.99■□□□□ 0.47
RER1-203ENST00000378513 PHKBQ93100 1093 aa17.99■□□□□ 0.47
RER1-203ENST00000378513 C8orf76Q96K31 380 aa17.99■□□□□ 0.47
RER1-203ENST00000378513 IL2RBP14784 551 aa17.98■□□□□ 0.47
RER1-203ENST00000378513 RBM43Q6ZSC3 357 aaKnown RBP17.98■□□□□ 0.47
RER1-203ENST00000378513 CCDC82Q8N4S0 544 aa17.98■□□□□ 0.47
RER1-203ENST00000378513 TMOD3Q9NYL9 352 aa17.98■□□□□ 0.47
RER1-203ENST00000378513 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.98■□□□□ 0.47
RER1-203ENST00000378513 TBC1D2BQ9UPU7 963 aa17.98■□□□□ 0.47
RER1-203ENST00000378513 V9GYY5 206 aaPredicted RBP17.98■□□□□ 0.47
RER1-203ENST00000378513 TNS3Q68CZ2 1445 aa17.98■□□□□ 0.47
RER1-203ENST00000378513 MCAMP43121 646 aa17.98■□□□□ 0.47
RER1-203ENST00000378513 TCIRG1Q13488 830 aa17.98■□□□□ 0.47
RER1-203ENST00000378513 IMMTQ16891 758 aaKnown RBP17.98■□□□□ 0.47
RER1-203ENST00000378513 HMGN5P82970 282 aaKnown RBP17.98■□□□□ 0.47
RER1-203ENST00000378513 TPD52L1Q16890 204 aaPredicted RBP17.98■□□□□ 0.47
RER1-203ENST00000378513 SLC9C2Q5TAH2 1124 aa17.98■□□□□ 0.47
RER1-203ENST00000378513 NAA16Q6N069 864 aaPredicted RBP17.98■□□□□ 0.47
RER1-203ENST00000378513 RALYLQ86SE5 291 aaKnown RBP17.98■□□□□ 0.47
RER1-203ENST00000378513 CNNM1Q9NRU3 951 aa17.98■□□□□ 0.47
RER1-203ENST00000378513 WDR17Q8IZU2 1322 aa17.98■□□□□ 0.47
RER1-203ENST00000378513 ZSCAN20P17040 1043 aaPredicted RBP17.97■□□□□ 0.47
RER1-203ENST00000378513 MICU3Q86XE3 530 aa17.97■□□□□ 0.47
RER1-203ENST00000378513 PRIMPOLQ96LW4 560 aa17.97■□□□□ 0.47
RER1-203ENST00000378513 DPCR1Q3MIW9 517 aa17.97■□□□□ 0.47
RER1-203ENST00000378513 LLPHQ9BRT6 129 aaKnown RBP17.97■□□□□ 0.47
RER1-203ENST00000378513 HPS5Q9UPZ3 1129 aa17.97■□□□□ 0.47
RER1-203ENST00000378513 TNNT1P13805 278 aa17.96■□□□□ 0.47
RER1-203ENST00000378513 ITGA6P23229 1130 aa17.96■□□□□ 0.47
RER1-203ENST00000378513 HSP90AA4PQ58FG1 418 aa17.96■□□□□ 0.47
RER1-203ENST00000378513 PIGBQ92521 554 aa17.96■□□□□ 0.47
RER1-203ENST00000378513 CAMTA1Q9Y6Y1 1673 aa17.96■□□□□ 0.47
RER1-203ENST00000378513 ZNF213O14771 459 aa17.96■□□□□ 0.47
RER1-203ENST00000378513 B4E1Z4 1266 aa17.96■□□□□ 0.46
RER1-203ENST00000378513 FAM160A1Q05DH4 1040 aa17.96■□□□□ 0.46
RER1-203ENST00000378513 STX1AQ16623 288 aa17.96■□□□□ 0.46
RER1-203ENST00000378513 DHX40Q8IX18 779 aaKnown RBP17.96■□□□□ 0.46
RER1-203ENST00000378513 ZNF396Q96N95 335 aaPredicted RBP17.96■□□□□ 0.46
RER1-203ENST00000378513 SALL1Q9NSC2 1324 aa17.96■□□□□ 0.46
RER1-203ENST00000378513 ADAMTS7Q9UKP4 1686 aa17.95■□□□□ 0.46
RER1-203ENST00000378513 DMTNQ08495 405 aa17.95■□□□□ 0.46
RER1-203ENST00000378513 TBC1D10CQ8IV04 446 aa17.95■□□□□ 0.46
RER1-203ENST00000378513 ENGASEQ8NFI3 743 aa17.95■□□□□ 0.46
RER1-203ENST00000378513 PIH1D3Q9NQM4 214 aaKnown RBP17.95■□□□□ 0.46
RER1-203ENST00000378513 ALS2Q96Q42 1657 aa17.95■□□□□ 0.46
RER1-203ENST00000378513 NPHP1O15259 732 aa17.95■□□□□ 0.46
RER1-203ENST00000378513 PHKA1P46020 1223 aa17.95■□□□□ 0.46
RER1-203ENST00000378513 SPECC1Q5M775 1068 aa17.95■□□□□ 0.46
RER1-203ENST00000378513 CMTR1Q8N1G2 835 aaKnown RBP17.95■□□□□ 0.46
RER1-203ENST00000378513 ISCA1Q9BUE6 129 aa17.95■□□□□ 0.46
RER1-203ENST00000378513 KIF6Q6ZMV9 814 aa17.94■□□□□ 0.46
RER1-203ENST00000378513 CYB5R4Q7L1T6 521 aa17.94■□□□□ 0.46
RER1-203ENST00000378513 AGXT2Q9BYV1 514 aa17.94■□□□□ 0.46
RER1-203ENST00000378513 WWC3Q9ULE0 1092 aa17.94■□□□□ 0.46
RER1-203ENST00000378513 IQSEC3Q9UPP2 1182 aaPredicted RBP17.94■□□□□ 0.46
RER1-203ENST00000378513 LAMA4Q16363 1823 aa17.94■□□□□ 0.46
RER1-203ENST00000378513 MRPS27Q92552 414 aaKnown RBP17.94■□□□□ 0.46
RER1-203ENST00000378513 ZNF274Q96GC6 653 aaPredicted RBP17.94■□□□□ 0.46
RER1-203ENST00000378513 ZKSCAN3Q9BRR0 538 aa17.94■□□□□ 0.46
RER1-203ENST00000378513 NBPF3Q9H094 633 aa17.94■□□□□ 0.46
RER1-203ENST00000378513 ERVV-2B6SEH9 535 aa17.93■□□□□ 0.46
RER1-203ENST00000378513 TOMM22Q9NS69 142 aa17.93■□□□□ 0.46
RER1-203ENST00000378513 RRP12Q5JTH9 1297 aaKnown RBP17.93■□□□□ 0.46
RER1-203ENST00000378513 ZNF771Q7L3S4 317 aaPredicted RBP17.93■□□□□ 0.46
RER1-203ENST00000378513 MB21D2Q8IYB1 491 aaPredicted RBP17.93■□□□□ 0.46
RER1-203ENST00000378513 GPR108Q9NPR9 543 aa17.93■□□□□ 0.46
RER1-203ENST00000378513 TRMT112Q9UI30 125 aaKnown RBP17.93■□□□□ 0.46
RER1-203ENST00000378513 SMC2O95347 1197 aa17.93■□□□□ 0.46
RER1-203ENST00000378513 PDIA4P13667 645 aaKnown RBP17.93■□□□□ 0.46
RER1-203ENST00000378513 FMR1NBQ8N0W7 255 aaPredicted RBP17.93■□□□□ 0.46
RER1-203ENST00000378513 LINC00301Q8NCQ3 95 aa17.93■□□□□ 0.46
RER1-203ENST00000378513 APPBP2Q92624 585 aa17.93■□□□□ 0.46
RER1-203ENST00000378513 SKILP12757 684 aa17.92■□□□□ 0.46
RER1-203ENST00000378513 NCOA7Q8NI08 942 aa17.92■□□□□ 0.46
RER1-203ENST00000378513 CLIC6Q96NY7 704 aa17.92■□□□□ 0.46
RER1-203ENST00000378513 COL18A1P39060 1754 aa17.92■□□□□ 0.46
RER1-203ENST00000378513 CCDC69A6NI79 296 aa17.92■□□□□ 0.46
RER1-203ENST00000378513 ATP2B1P20020 1258 aa17.92■□□□□ 0.46
RER1-203ENST00000378513 CTDSPL2Q05D32 466 aa17.92■□□□□ 0.46
RER1-203ENST00000378513 LRRC8AQ8IWT6 810 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms